Array 1 16408-16904 **** Predicted by CRISPRDetect 2.4 *** >NZ_BCUH01000058.1 Psychrobacter phenylpyruvicus DSM 7000 = NBRC 102152, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 16408 33 100.0 32 ................................. TAGCCCACCTATGACACGCAGCGATCGCTGTG 16473 33 100.0 33 ................................. AATCTCTTTGGTGACGCTCTCAACAGTAGGCTC 16539 33 100.0 32 ................................. TATATAAACCCAGTCACCTCTTGATAGGGTGT 16604 33 100.0 35 ................................. ATCTGAGACAGGTAAGGTTGCTTACAAGATCAGTG 16672 33 100.0 33 ................................. TTTGTGGGGTTGGGTTGTGAGCTATACCATGCT 16738 33 100.0 34 ................................. CACGTAACAGTAGTTGCTACTGATAGGTTTGCAA 16805 33 100.0 34 ................................. ATTAACGCCTTGTTCAAGTTGTCCGCCGCATAGG 16872 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= =================================== ================== 8 33 100.0 33 TTCGCACCCAATCACGGGTGCGTGGATTGAAAC # Left flank : GGTGCCAAAAGATTGAGACAAATCGCCAAAAACTGTCTTAATTATGGACAACGTGTACAGTTTTCAGTATTTGAAATAGAAGTAAATCCTGCGCAATGGACAACTCTTAAAGCAACGCTAGAAAAGATTATCGATCCAGAAACAGACAGTTTACGCTATTATTATCTTGGTAAAAACTGGCAACGTAGAGTCGAGCATATAGGCGCAAAACCTGTACTGGACTTAAATGATATGCTTTTGTTCTAAACTAACCCAATTTTTTTATTAAAATTTTTTATAATGGTGGCTGTTATAAGGTCACTGCGAACCTATAGCGTACATAAAATCCCTGGGATATTCGCAATTAAGTCGCAAATTATTTAACAACTTGATTTTATTAACTTTATTTTTTAACTTTAGCGGTTTGGTAACTAAGCTAGTTACCAAATCTTGCCCTATGATAGTGACTCGCAAATTTAAAGGTTTTTTTTCAACCTAATCTGCAAGTTAACATATGGGCT # Right flank : TTTGTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCGCACCCAATCACGGGTGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.20,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [66.7-8.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : NA // Array 1 20265-16175 **** Predicted by CRISPRDetect 2.4 *** >NZ_BCUH01000046.1 Psychrobacter phenylpyruvicus DSM 7000 = NBRC 102152, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 20264 33 100.0 34 ................................. TAGCCAGCTCTGAAAAGGACTCAGGAGACACTAT 20197 33 100.0 34 ................................. ATGAAGCTTTAACTGGCTCAAGCCAGCAGCAGGC 20130 33 100.0 34 ................................. TCTAATGATATGCGTAGCCACGCGTTGTCCGCCG 20063 33 100.0 33 ................................. GGACTACTATCGCTTATCTTGCGACAGCACGAG 19997 33 100.0 35 ................................. ATATCTTTCTCCTCATACAAAGTAACATCTTTAGG 19929 33 100.0 34 ................................. AGCCCCAGTATGATAGCCTCCAACAAAGCATCTT 19862 33 100.0 34 ................................. ATCGTCCATAAACCTGTGGTTTAGCCAAAAATTT 19795 33 100.0 33 ................................. CAACAAAGAGGATGTTACACAAGAAGCGTACGC 19729 33 100.0 34 ................................. ATCACTAAGTGCTCAAGCTCAGCTAAGCTTTGAG 19662 33 100.0 34 ................................. TTAACGCAAACATAACTTTATCCTCATTTGGTTG 19595 33 100.0 34 ................................. ATCATTGTGTGTATTATAATAATATGTGTATTAT 19528 33 100.0 32 ................................. AATTCAACCATACTGGTTGCAATTTAGTGAAA 19463 33 100.0 33 ................................. TCATTTCAAGCTGACCCTACCGTTAGGATTGTC 19397 33 100.0 34 ................................. CATGCATAGCATGCATGCATAGGTGTTTGACACT 19330 33 100.0 33 ................................. TAGCAATTATGTCGCCTTATATCCACCCCCTGA 19264 33 100.0 33 ................................. TTCGTTGGTAGAGCAAGCTCCGTCATAGCTGCT 19198 33 100.0 33 ................................. TGCTATATCGTATTCGCAAGCATGGTATAGCCC 19132 33 100.0 34 ................................. GTTATCATCACTCGCGCAGGCGGTGACATCTCGC 19065 33 100.0 32 ................................. CTGGCAACCTGTAGGCCTTTACAGGCCATACA 19000 33 100.0 32 ................................. TTTGATTTGAGTCTTTACAGCGTCCATATCGT 18935 33 100.0 33 ................................. TAGCAGAGCAAAGCACTGTTAATCATATTGAGG 18869 33 100.0 35 ................................. CCTTGAAAAATAACCCCATCTTCTTTGCACTACGG 18801 33 100.0 34 ................................. TTTTTGGATGTTAGCGACAATACCAGCGGCTTGT 18734 33 100.0 32 ................................. ATTGAACCTTGAATGGCCACCAACAGCAGCAG 18669 33 100.0 34 ................................. AGTACGGATCACAAGATGATGACGAGCCGATCCC 18602 33 100.0 32 ................................. CAAATGGCCATATAATCAAACCGCTGCATAAA 18537 33 100.0 33 ................................. AAGGGTTATTTTAAGTTTTTTTTGGGCTTTGAG 18471 33 100.0 32 ................................. GGACACCTTAAAAGAGTTAGCAGACAAGATTA 18406 33 100.0 34 ................................. TAGTCCAGTCTATTGGGCTAGTTTCCACTAGGGA 18339 33 100.0 32 ................................. TTCTTGGACGTGAGCTAGTATGTAAATACGAG 18274 33 100.0 31 ................................. TTACCGCTGCCTTTCGGTTTTGTGCCATCCT 18210 33 100.0 34 ................................. AACAACAGTCGAACAACAGATAGCGAAAACCGAA 18143 33 100.0 34 ................................. GTTGAACTCGGCTTGCACTGTATCAATGCGGGTC 18076 33 100.0 33 ................................. CTTGTCCTGCTCCACAAGCTTATCCCGTAGAGC 18010 33 100.0 34 ................................. ATCCTTAAAACCCTTAACATTCAGCTGTTGCATT 17943 33 100.0 32 ................................. TTAGTTAAGCTTGCTAATTTTTTGCGTACTAA 17878 33 100.0 35 ................................. CTCTTTGGTCATACCGATTTGGCGTATTCTGCCGT 17810 33 100.0 33 ................................. AAAGCCATTTACAAGACTAAAATAAGCGACATA 17744 33 100.0 34 ................................. GTACCTTTGTTTGTATTGCCAGTATGGTAGATTT 17677 33 100.0 33 ................................. GTAACGTGCCTTTAATTCATCGTTGAGCATTAT 17611 33 100.0 32 ................................. AGATGCTGACTGGAGTTACGGCATAACCCCAT 17546 33 100.0 34 ................................. TCCTAATGGCTGACTCGTAAAAGTCAGCTCTAGG 17479 33 100.0 34 ................................. ATCATTTGACTTTAGGTAGTCTTTGGCTTTAGCG 17412 33 100.0 36 ................................. ACCAACATCATCATGTATATAAACGTTGCAATCATC 17343 33 100.0 34 ................................. AAAGTAGAAGTAACCTGATTTACTATCGCTATCT 17276 33 100.0 33 ................................. GTGTGAGATAATTTGAAGCTCTAAAACCTCGTG 17210 33 100.0 36 ................................. ATCGTTGAGCGTGATAGGCATTGGTATGTCGCCATA 17141 33 100.0 35 ................................. GGACGTTACAAACGAAACCGGCGTCGGCGTTGAAT 17073 33 100.0 34 ................................. AGTCGAACCAACAAGCCGGCCGCGAACTGGGCAA 17006 33 100.0 36 ................................. CATACTGCCTCATAGCCTGCTGCTGCATCTGTTGCG 16937 33 100.0 33 ................................. TGACTCTCTTATTTTTTTAGTAAGCGGCGGAAT 16871 33 100.0 34 ................................. ATCTTGCTATCGCCCATCACACCGTCACGATATG 16804 33 100.0 33 ................................. GGCGCACACGACAACAGTAATCGTGTCGCATAT 16738 33 100.0 32 ................................. TTAGATGCTGAGGGTACTTTAGATGAGGCTTA 16673 33 100.0 33 ................................. TCTTCATCAACAGTGTAAGCAGCACCAAACTCT 16607 33 100.0 35 ................................. AGCTACATCAGATAGCGCCATACCGATTTGGTCAG 16539 33 100.0 33 ................................. CAACCTGTAGTTGGGGTTTCTTTAATATCAGTT 16473 33 100.0 33 ................................. TCTAAGCTGTGGTTGCTTTTTTAGCATCTGCTA 16407 33 100.0 35 ................................. GTAGTAATCAGCTTCAATCTCGTTAAACTTATAGC 16339 33 100.0 33 ................................. AAACATAGCTTTTTCACAAGAGTCCGGCTAGGG 16273 33 93.9 33 ......T..............T........... TAGCAAAGCTTGCACGTAAGCAAAAAACTACTT 16207 33 87.9 0 ...A..T..........A...A........... | ========== ====== ====== ====== ================================= ==================================== ================== 62 33 99.7 34 TTCGCACCCAATCACGGGTGCGTGGATTGAAAC # Left flank : AGTAATTGCAAGAGTTGCAATGTGGGTA # Right flank : ATAAGGAAAAATGAAATGAAAATGAAAATATATTGTAGTAAGTTCGGTAAGTTGGTTGAAGCTCATCCGTTTGGTGGTGGCGAGTTAATACATTTAGCGAACTGGATTGATGACTTGAAATGTGACGTGAAAACAAGTGCTGTATTCGATCAAGGCTTACCGACGCTTATACTTACTAAGGGCGACGATGTAATAACTTTAAAGCCGAACCAGTGGTTGGTACGTGAAGATGAAAATGAATTCAAAGTAGTCAGTGCGGAACAGTTCCCTAATTTATACACGCTACACCAACCGACAGAAGGCGAGTGATATGGATGTTCAAAAATCAAAGTCATTACTATCGCATAGAGGGCCTATGAGCAACGTTTAAAATTGCACACCAATTTTGGCTGTGCAAGGGAAATCCTTTAAATAGAACTTCCAAAGCCGATAGCTTGTAGAATTTGTTCCGAGAAACAATTGCCTCTTATATTGCAGAAAAAAATTATGTATGTTACTCA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCGCACCCAATCACGGGTGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.70,-5.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,5.28 Confidence: HIGH] # Array family : NA //