Array 1 23070-25300 **** Predicted by CRISPRDetect 2.4 *** >NZ_VWMD01000030.1 Bacteroides salyersiae strain BIOML-A3 scaffold30_size56858, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ========================================= ================== 23070 35 100.0 34 ................................... AGAGCCCAAATCACACCGATACCGGCACAAATGA 23139 35 100.0 34 ................................... TTATTATGCTTTTGTCCGTCTTTACCGTACAGAG 23208 35 100.0 35 ................................... TAATAGTTTATGTTTGGCAGGGTGACCCCAATCAT 23278 35 100.0 37 ................................... GCATATCCGGGGTCGGAGGAACCAGTTTGTCTACATT 23350 35 100.0 36 ................................... ATTGGGGTGTAGAAAATATCATCCTCTGTGGTGATT 23421 35 100.0 40 ................................... TCCAACGTATCCTCCGATTACCTCAACAGCGAAGTTGCGA 23496 35 100.0 40 ................................... CTTCCCGTTGCTTTTTGGTCAGCCGGTTGAGAATTTTTTT 23571 35 100.0 37 ................................... AAACTATTCCTTTGGGAAGGTTTGGCTTATGCGTAAT 23643 35 100.0 39 ................................... GGTATTTTCTTGCGCATTGATATTTGTTGTTGCAGCAAT 23717 35 100.0 36 ................................... GAGATTTCCAATATCTTACGGGTCGCTTCCTTACCG 23788 35 100.0 34 ................................... AAACAGTATCATTCATAACTTTGGCGTTTATATA 23857 35 100.0 32 ................................... ATTGAAATACGTCAATATAACGGCCGTTGTTT 23924 35 100.0 36 ................................... AAATCCAGACTTTGTGTGCCATTGTCTTCTTGGTTT 23995 35 100.0 36 ................................... AGGAGGAAATATGCATCTCCCTTTGCCTTACTGGTG 24066 35 100.0 33 ................................... GAACTCAGATTTGTAAACGCCCATACGAGCTTT 24134 35 100.0 35 ................................... ATTATCTCATCAGAAAGTCCCTGTAACTCCCATTC 24204 35 100.0 38 ................................... TAAAAGCATTTCCAAACCGTTTTCCGTCTCAATGATTT 24277 35 100.0 39 ................................... TTTAAGGAGACTGAAAGTTTCAAGCTTCAGCCGCAAAGA 24351 35 100.0 34 ................................... TTCTGGGCTTTCAGAATATTGGTGTAACAAGTTG 24420 35 100.0 38 ................................... TTTTGGAACGCTTATAGGGTTCCATTTTTACGTGTTTC 24493 35 100.0 41 ................................... CTTTTTACATTTGCGACTGTTAATTTTGCTTTCATAATCTT 24569 35 100.0 34 ................................... AGAACCGGAGCAAGAAGTCAGAACACTTAAGGCT 24638 35 100.0 37 ................................... TTCCTTCGGAGCAAGGGAACAATTCTTTAACCAATAT 24710 35 100.0 39 ................................... GGCAAATATAGCAAGTTTGGCATTGTCTTTCATGATACC 24784 35 100.0 37 ................................... ATGCTATACCCTGATTCCGATATCCGTTTAAACAACA 24856 35 100.0 35 ................................... GTCGCAGGAAGTACACATTGCACCAAAAACTACTG 24926 35 100.0 37 ................................... GGCGGCGCAGCTGCTATTCCAACCATCTTGTGTACAT 24998 35 100.0 37 ................................... ATCTTTGGGAGTAGGGAGGATTAAGAACATTTTGTCT 25070 35 100.0 37 ................................... ACATTTTTGGATCATTCGGTTCAAGATGCACCGGTTT 25142 35 94.3 35 ...................A............A.. AACTCGATACCAAGAGATGAACTCAAAGCGTCAAA 25212 35 71.4 20 .A....A.....C...T..A..C..AA.C...A.. TGTGTATGTATACTTGTGTG Deletion [25267] 25267 34 80.0 0 ......-C..TC....TC.A............... | ========== ====== ====== ====== =================================== ========================================= ================== 32 35 98.3 36 ATTTGAGTTACTTCCAGTAGAATAAGGATTAAGAC # Left flank : TATGTGGCCAAGTGGTGAGATGAAGTGAACAAAACATGAAAAAAGGCCAAACTCTTGCGAAAAACGATAAAAAGATAATTATCTGATTTATTTGATATTATATTTTTTAGATAAATTGTATTACTTAAATCACATTCGCAACAAAATACATGTTAGCAACAAAGTAAATCATTTGCGAAAATGATTCATTACTATACAAGCGATCTTTGACGTATTGCATTTATAATCAATAATATATTGTATAATACCTCTATACCGTTTTTCGAAAATGAATCTTTTTAAAGAAATTCAAAATCATTTTCGAAAATAGATATTCAATGTAAATATCTTATTTTTAAGCAAATAAGCATATATTAGCCAAACAAATTATTGATTTTCTTAAAAATAATACATACATTTGCGAAAAAGTTATTGGAATATAGCGTATTGTATTAAATAACAATACTTTATGAGAAATATACAAAACAAAGAGTAAAAAATAAATTATTGATAATCAGATT # Right flank : CAAGCAACTCTCTAAAATCATTTATATCTCATTATCCCGAATTCAGAAACAATGATACATCATACACCTTTAATTCACTCTAATAATATTACCCCATTTTAACCTCAAAATTTTTCTTTTCCAATACCACATATCCCGCATTTTCATTATATTTACCTCCAAATACGCAACACCAAATGGCAAGAGCAAAAAAGACATTCTGTGTCGTAGCATACGATATTAAAGAAGACCGGAAAAGAGCACGCGTCTCTAAAATTCTGGAAAAATATGGAATAAGAGTCAATTTCAGTGTATTCGAATGTATGTTTACCGATATCCAACTATTACAAGTGCAAGAGAAAATAAAAAAAATATTGGATAAACGCTCCGATACAGTCATATACTATCCGATTTGCGTCAATTGTTATACAAAAATCATATATCAACCGGCACATCGCCAAACGTCCCGCACTATAGAAATTGTATAAAATAAAAAGAAATCATCTGATGAAACCCAAACG # Questionable array : NO Score: 3.14 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:-0.02, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTGAGTTACTTCCAGTAGAATAAGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-19] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0.37 Confidence: LOW] # Array family : NA //