Array 1 87831-85763 **** Predicted by CRISPRDetect 2.4 *** >NZ_VSUO01000004.1 Ligilactobacillus salivarius strain FWXBH35_2 scaffold4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================================================================== ================== 87830 36 100.0 30 .................................... GATACCAGATTGAACGGTCCATGTCACCTC 87764 36 100.0 30 .................................... TAGGAAATGGCCAGCCCCAACCGTTTGACG 87698 36 100.0 30 .................................... TTGTACCGAACCAACTAAAACGAACGGATA 87632 36 100.0 30 .................................... TCGCGAGATCACTTACAAGTTACTGTACGT 87566 36 100.0 30 .................................... TTAGGGGACTCTTTAGAAGGGTTCAGAATA 87500 36 100.0 30 .................................... AGATTGAATTAGAACTATATCCAGCAAGGA 87434 36 100.0 30 .................................... TATAACAAAGCTAAATTCGATCGTACAAAG 87368 36 100.0 30 .................................... AAGGTCGACAAGTTGGAAGCCGTGAATTGA 87302 36 100.0 30 .................................... CATAGTAATACTTGGTTGATTAGGTACTGC 87236 36 100.0 30 .................................... AGGCTCATTCATTATCAAGAACATCAAGAA 87170 36 100.0 30 .................................... TGTTATTCCATCTAAATATGAAATAGGCAA 87104 36 100.0 30 .................................... GATCTTATGTAGATCATACTTGGAAAGAAT 87038 36 100.0 30 .................................... AGATAAATATAAAGATGCTACTAAAAATTT 86972 36 100.0 30 .................................... TTAATATGTTTAAAAGGGACCGGTTTTCCT 86906 36 100.0 30 .................................... TTAGTCATACCTATTATCACCAACACCGGT 86840 36 100.0 30 .................................... TTAGAATTGTCATCACAATGCGGCCAAGTA 86774 36 100.0 30 .................................... GAGTACTACACGTCCGCAAGCAATGACTCA 86708 36 100.0 30 .................................... GGCAAGCATTAAAGAGGTTCAAGATAGATT 86642 36 100.0 30 .................................... GAATTGATGGACAAAGAGACCAATAGAGGA 86576 36 100.0 30 .................................... AAACACTCCAAGTGTTCAAGCAGCTAGAGG 86510 36 100.0 30 .................................... AGATGTCGGTGGAATATAGCCCATGAACTG 86444 36 100.0 30 .................................... TGCTTTTTCATGGTTTTGGTTCGTTCACGC 86378 36 100.0 30 .................................... AGCACGTTTGAACAAGTACGCTAAGCAACG 86312 36 100.0 30 .................................... GAAATAAAAAAGCCCAGAGCATAAAGCCCT 86246 36 100.0 30 .................................... GAACCATTTACTTCATACGTGATGTTGGCG 86180 36 100.0 30 .................................... TATCTAATGTATTTTATGGATCACGTCAAA 86114 36 100.0 30 .................................... AAGTTCACACGAAAAGCCCTATGACAATAC 86048 36 86.1 29 ..........T.........T...A......G.C.. ATCTGCGTTCAGTTGGTGTCTCAATGCTC T [86014] 85982 36 94.4 82 ........................A..A........ ACAACTGGAGTTTGAGTACGTTTAGCTTGTGTTTCAGAAGTATGTTAAAAACCTATTATATGTTATAATATGAAAGTGTTTA 85864 36 83.3 30 .....G....T.........T.........G.T..T AGTAATTCACCGCTAGTTAAGTGGTTTTTT 85798 36 80.6 0 ..........A.........T...AG...CG..G.. | ========== ====== ====== ====== ==================================== ================================================================================== ================== 31 36 98.2 32 GTTTCAGAAGGATGTTAAATCAATTAGGTTAAGACC # Left flank : AACAGACCGAATTAGTAAAAAGTATATGAATGTATTAATTAAGAAGATTATTGAAGACATCACAGACGATGAAAGACAAGCAATACTAAAATCAGTAAATAGTTTGTATGATCGTATTCGAGAGGTTTTGTATAAAATTGATATACCATTACAAGTAGATTATGACAATGATTTAACAAGACTATTTAAGTATTGTCAGGTACATACAGAGGCATTGCTATGGAAAAATGCGTATGATAGAATATCTTCAGATGTTAAATTGCATGTGGAACTAAATAGAGAAAGAATTATAGGTCTAACCAATGTCGCACATTATCTCACTAAAGAAGAGTTTCAGGAACTTGTAGGTCTTGTTAAGGCGACTAACTCATCAATGTTTATAATTGAATTCACAGAAAAGAATGGTCAGAGATTCTTTGAAAGCTGTGATAATTACTACATTGATGAGGATTATATTGATTGGTACTAACGAATCGTTAAATTTTGATTATAAAGTAACG # Right flank : TAAAATACAAAAAATATTTCATAATATTTATAAATCTATCAGAAATTTTCTGGTAGATTTTTTTAGTGTAAAAATTTTTGAGTTTAAGATATATTATGGTTGATAATGTAATATTATATGATATATAATATAGTTGAAGATGAGATATAAAAGAAAGTGAGGGATGATGATGAAAATTCAAGTTAGTTCTGATTTACTAGATGGTTTAGTATTAGCGCTTTTAGATAAGCAAGATTATTATGGATACTCATTGACACAGGATATGCAAAGAGCAATTTCAATTTCAGAATCAACACTCTACCCAGTATTACGAAGGTTAAAGAATAATGGTTTATTAGAAACATATGATCAATCATATCAAGGGAGAAATCGTAGATATTATCGCATAACAAATAGTGGGGAAGAACATTTAGGAAGAGTTAAAAAAATGTGGAGCGACTACAAAGTTAGTTTAGATTCAATTTTCGAAAAAAACTAGGGAGGGGGAATAATAATGAACT # Questionable array : NO Score: 6.05 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:-0.11, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGGATGTTAAATCAATTAGGTTAAGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.70] Score: 0/0.37 # Array degeneracy analysis prediction: R [21-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [85.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA //