Array 1 210057-207855 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFLHF010000007.1 Chryseobacterium scophthalmum strain 1433 NODE_7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 210056 47 78.7 30 AAAAGTTG....C..A............................... CGGGCGATAGTGTGGTACGCGTTACGGTTA 209979 47 97.9 30 ...C........................................... CCTAAGCATACAATAGATTTAGATGCTATG 209902 47 100.0 30 ............................................... TGGTTTGTTAAATAGACTATTTCACGGTAC 209825 47 100.0 30 ............................................... CAGTTGATTTGTCTTATGCAGATATTGTTT 209748 47 100.0 30 ............................................... ACCGTCAGTGTGATCAAATTCTACGTGTAG 209671 47 100.0 30 ............................................... GGCAAATTCGTGACGATGTGAGGGAAATGA 209594 47 100.0 30 ............................................... TATCTGCCATTGTGGGATTTACCATCGGCG 209517 47 100.0 30 ............................................... GGTACAAAAAACAATGTGGAAGCAAGGTGT 209440 47 100.0 30 ............................................... GTGGAAAATATCTCAATGCAACTATCCCTC 209363 47 100.0 30 ............................................... ATCGGCGAAACTCCGCCTCCCAACCATTCT 209286 47 100.0 30 ............................................... ATTGTTAACGAAGTATTCACTAAAAAATCA 209209 47 100.0 30 ............................................... ACATCTGAAATCTTTACGCCTCCGCTCAGG 209132 47 100.0 29 ............................................... TGAAATTTCTTACGATGATGCAGCTAGCA 209056 47 100.0 30 ............................................... CAATAAATCTGAACTCCTAAACTGAAACCG 208979 47 100.0 30 ............................................... GTTTATACGTTGTCTCATGCATTCTACGCA 208902 47 100.0 30 ............................................... TCAAGTATAGTATTGGTGCGGGAAGCATTA 208825 47 100.0 30 ............................................... AAAATTGCAAAATACATTTGTTTTGGAGTG 208748 47 100.0 30 ............................................... TTAGGTAAGAACGTCCATTGGATTGCGTTA 208671 47 100.0 30 ............................................... TGGAGCCATTTAAGTAAGTTTGTGGAAATA 208594 47 100.0 30 ............................................... AAAAGGATTTATCAGATGAAGGGTTACAAA 208517 47 100.0 30 ............................................... TTTGAATGTAAGATTAATAACTCCAAAAGG 208440 47 100.0 30 ............................................... AAAAAAAATAGATGAGGAACTGCAGTTGTA 208363 47 100.0 30 ............................................... TTGGCCTCTAAAGTGACCATTTGTTTTTTT 208286 47 100.0 30 ............................................... AATTCTTATGAACTCCCAAAACAAATATGA 208209 47 100.0 30 ............................................... GAGTTATCGGAGAATATGAATTGCCTTTTA 208132 47 100.0 30 ............................................... ATTGAAAACACGATAACTCAAAATTTATTG 208055 47 100.0 30 ............................................... ATTCTTTTTGAGCGAATAAAACATTGTTTG 207978 47 100.0 30 ............................................... TAATAGTTTAGGTGTACATATCGATGATTA 207901 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 29 47 99.2 30 GTTGTGAATTGCTTTCATTTTTGAGTATCTTTGAGATACAACACAAC # Left flank : CGGATTAACAATTAATTACGAAAACGGAATTCCAACCCCATACATCCGTCAAGCAAAAGCGAATGTTTATCTGGATGAAATGCTAACTGATGCAAGTACTCTTACCGGCTTGTCGGCAGATAATATCGCTATGGTAAAAATTATTAAAGATGGTGCAATTGGTATGAGTGGCGGTGGTAGTGGCGGTGTACTGATTTATACCAAAAGAGGAGATATGAAACCTGTATCCAAAGCAAATACACTTTCAGAAATGGTTAACCTCAACTTTTTTGTGATGGAAGGTTATAATGAATCTGAAGGATATCCCGATTCTGATTATGGAAATTCTGAATTATCTAAAATAACTAGCGATTACAGACCCGTACTCTACTGGAATCCTAATATGGAGATAGATCCGGATACTCCCGCAAAAGTTGATTTTTACAATAATGATACTGCAAAAAAATTCCGTTTTATGATTATGGGATTTGATGCTGAAAAATATATACCTGTTTACTATC # Right flank : CTCAAAAGCTAAACCTACTGTTTATCAGTAGGTTTTATTTATTTTTAGAATTCCAAATTTTGCATTTTTGGATGGGGGTTTAAAATTGATTTTTGTTATTTTTTAATTCGTAAGAATCCCATTAATTATTGCAACAATCACAAGACTTACATTATTATCCAAACTTGATATCTCATTAATGCTTTTAATGAATCAAAGATTAAAGGAAAATTGTTTACAAAAAAAGATAATAATTAAAATGTATTAAGATTATTAACTGATAAAAATATCAAGTCCTAAAACAATTCTAATTGTTGGAAGGTAGGCGGTGGTTCTTCTTTATTCCGAGCAAAGAAAATTTCTATATCTCCAAATTGTTTATCGGTAATGCACATAATAGCTACTTTTCCTGCTTTTGGGAGCATAAACTTTACTCTTTTAATATGAACCTCTGCGTTTTCTCGGCTTGGGCAATGACGAACGTACATTGAAAATTGAAATAGCGTAAAACCATCATCCAG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCATTTTTGAGTATCTTTGAGATACAACACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCATTTTTGAGTATCTTTGAGATATAACACAAC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.40,-5.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //