Array 1 1285-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLOH010000040.1 Tissierella carlieri strain N39 No39_ctg002, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 1284 30 100.0 35 .............................. AAAAATAAAGCAGGATATCCTGAAAGTTTTAGAAA 1219 30 100.0 36 .............................. ACATTTTCCAACCTTTCCGTAATGCTATCCCAGAGA 1153 30 100.0 36 .............................. TACTAAATGTAGTAATAGCAAGCCAAATACCAAACA 1087 30 100.0 36 .............................. AAATTAATTCAACTAACATATAAAAACCTCCACTAA 1021 30 100.0 37 .............................. ACAGTAAGAGAAATAGCAGAAACCTTAAATATACATG 954 30 100.0 36 .............................. ACATTTTCCAACCTTTCCGTAATGCTATCCCAGAGA 888 30 100.0 36 .............................. ATTCTCTATATAAATCAATAAATTTCCACTTTATTA 822 30 100.0 36 .............................. TAATGACACATATAATTTTGTTTTTAGATATGACAT 756 30 100.0 35 .............................. TCTTCCCATATCCAGTTTTCTTGTATTTTTCTATG 691 30 100.0 37 .............................. TAATAATCATTTGCACCAAATCCAGCATGAGTGTTTT 624 30 100.0 37 .............................. TATATTCATAATATAGATCAAAATACATTGAATACAG 557 30 100.0 35 .............................. TATCATGACAATTTCCAAAATTACAAGAGATATAA 492 30 100.0 36 .............................. TAACCTAGGTGTTAACGCTTATGCATCATCAACAGA 426 30 100.0 35 .............................. TGAAAAAGAATTACCCAGATGTAATAAGAGATATG 361 30 100.0 37 .............................. AAGCTAAGTATAGAGGAAGAACGATAAACCTCTGCAC 294 30 100.0 37 .............................. AAGGAACTTGATAAAGATAAGGATAAGCGAGAGATAA 227 30 100.0 37 .............................. TATCATCACATTTGCAATTAGTTCTATAGCAGTTCAT 160 30 100.0 35 .............................. CTCCGCATTCAGTGCAGAGGTTTATCGTTCTTCCT 95 30 100.0 36 .............................. TATACTCAAGAAGCGTAAACAAGGAGGGTAGAGAAA 29 29 96.7 0 .............................- | ========== ====== ====== ====== ============================== ===================================== ================== 20 30 99.8 36 GTACTTAGATTACCTATGAGGTATTGAAAC # Left flank : TATAAAAGACTTATAAGATTAGAATTATACAAAATACAAAAACATATTACTGAAAATCAACCATACCAAGGATTTGTAGCGAGGTGGTAGAATGTTTGTAATATTATTTTATGATTTCGGAGAGAAAAGAGTTGGAAAAGCTCTGAAGACATGTAGAAAGTATCTGACGTGGGTTCAAAATTCTGTATTTGAAGGTGAAATCACAGAGAGTAATTTGAAAAAATTAAAATATGAACTTGTAGCTAAGATGGATAAGGAAGTCGATTCATTAATAATATATACTTTTGCCAACATGAAGTACTCTAATAAAGAAGTAATTGGAATAGAAAAAAATCCTCAATCTTTGTTCCTATAAATTTTCGTCGACCCCCAATAGTGTAAAAAAATTGGGAGATCGATGAAAACTAAAATGGCTTAATCAAGATAGTTTAGTAAAGTGCTATGAAATCATAAGGAATTATGATAAAATCGATATGTAGTAATAGTGCTATGTGCACGGG # Right flank : A # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTACTTAGATTACCTATGAGGTATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-3.30,-3.30] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 2 10953-10063 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLOH010000040.1 Tissierella carlieri strain N39 No39_ctg002, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 10952 30 100.0 34 .............................. TATCATTACCGAATTTTTCCTCGATTGCTAAATC 10888 30 100.0 37 .............................. CTTGCAAAAGCAGCAGCAGAAACCGAAAGAGATTATA 10821 30 100.0 36 .............................. CCCGCAGGAATGAGTACAGATGATTTTCTGAAGAAG 10755 30 100.0 37 .............................. TGCAGTCCTTCGTACTGATTTCCATTATGTTCTACTA 10688 30 100.0 36 .............................. AGTCATTAATCTCCATTCAAATCTCTCCTCATACAT 10622 30 100.0 36 .............................. CCAGGATCGCATCTGCTTCGGGCAAACTCTCTATAA 10556 30 100.0 37 .............................. TTAGAAGAGTAATCAGAAACACCACCTATACTATTGC 10489 30 100.0 36 .............................. TTGTTGACAAACCATTCCCTAATTTCCCCTACCTCA 10423 30 100.0 36 .............................. ATAGCTTGCTTATATACGTATTCTTTAGTGTTTCCT 10357 30 100.0 36 .............................. CTACGAATGACATAAGACCTTCAAAGTCTTCATTAA 10291 30 96.7 37 .............................T GTATATGCCTTTGGCTCATTTAGTACTTTTGTTGGAG 10224 30 100.0 36 .............................. AATATAGTAACATTTATAATTTACACCTCCTAGAAA 10158 30 96.7 37 .............................T CAAGAAAAAGCAGGGTTTGTTTCGCTAGAGACTATCA 10091 29 93.3 0 ...A....................-..... | ========== ====== ====== ====== ============================== ===================================== ================== 14 30 99.0 36 GTATCTAGATTACCTATAAGGAATTGAAAC # Left flank : AATATATAAAATAGTTTTATTAATAGGGTAAGTTTATTGTTTTAATAATTTCATTGAAGAATCAAAGAGAAGGGATTATTATGTAATTATAGAAAAGAGTAAATAATTTGTTTATAATAATGATGAGAAATATTACCCCAAATTTATTAAATTATTTCTTGTTGTTTTTCTGATGGCGACTTTGATGAATTAACTGACAATTCAATGTTAAAAACTACTATAAACAAAGATTGGTTTGTTTCAGAGTCAAGCTATATCGATTATTTATTCTTTTGGATGAGGATGTATTTTTTAGTATTAAATACTCTAACATAGAGCAATAGACATGTAAAAGATCTACAATCAATATTCCTTTAGAGATTCGTCGATCCTAAATGATGCAAAAATCTTTGAGGGTTGACGAAACTAAAAATAACTTAGGTAAGCCATTTTATAAAATTCAATACAAAGATGATGAAGTATGGTAAAATAAGGATATAGTAATAGTGCTTTGTGTACAA # Right flank : TAAAGTAGGAGTACTTAGAAGTATGGCTAATTGTATTATGGATATATAGTAGCGTAGTAGGCACATTTCTCCGAACATTTTTCAAAATGGTACCTTGGTCTTTTCTTCATATTTCTAATGAGTAATGTAATCAATAAGACTATGTATTGTTCTCTGTTATATAAACACTCTATATAGTGAGATATTGCTAACGAGTTAAAAAACTAGTAAGCCCATTTTTCATAAATATGGATAGACTTCATTTGGGATTTACGCCTTTTGAACGCTTTAATATAATCAACAAAGATATTATAAGTTTTAATAAAGGTAGAAGTAATTAATTTAATTAGTCTCAAAATAGTGATAATGACTTTAAATCAAACATAATGAGGAATTATAGAAGAGAAGGAGGACTAGGTAGTATACTAGATATTTATAATTGAAATAATTCTAAGAAATAAAAGTTGACTATTAAAAATTCCAGTTCTAGTTATTATTACTGGGATTTTTTCAATTATATT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATCTAGATTACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.30,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA //