Array 1 14338-13029 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABTDL010000017.1 Enterococcus faecalis strain WW_0081I contig00017, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================================================================================================== ================== 14337 37 97.3 29 ....................................C ACCTTTTGGCGTTGCATTGGGACGTCTCC 14271 37 100.0 29 ..................................... ACAACGCACGAGAGCGTGTAAAAGACTTA 14205 37 97.3 29 ....................................C AGGTGAAATATCATAGTTTACCTTCCTGT 14139 37 100.0 29 ..................................... TCTTAATCTTCATCGCTTTCACCTAATGT 14073 37 100.0 29 ..................................... CGATATAAGCATTTTGTATCGTCCAATGT 14007 37 100.0 29 ..................................... CTTTACCTTCTGTGAAAAATGGTTCCTGT 13941 37 97.3 29 ....................................G AACAACGTATAAGTTCGTATGTAGGGCTT 13875 37 100.0 29 ..................................... GCGAATCTTTGGCATTCTATCACGAAGCT 13809 37 97.3 29 ....................................A GTTAGAGCCGCTTAGATTCTTAGAGAAGC 13743 37 97.3 29 ....................................A CGTGCAACATTATACGCTGCCGACTTATT 13677 37 97.3 29 ....................................G ACATGGTAGCGATGAACGATTGCAACAGA 13611 37 100.0 29 ..................................... AATACAACTTTCTCACCATCACGATAGTT 13545 37 97.3 29 ....................................A TCTTCACCATTGAAAGCACCTTCTTTGTA 13479 37 97.3 29 ....................................A AATGAAGTCAGAACGTGAACGACTTGAAA 13413 37 100.0 29 ..................................... CGTAAAAATTTATATCGCATTGAAAATAG 13347 37 97.3 29 ....................................G CAATATCTTGGTACGTCATTCAAGGTTGC 13281 37 100.0 29 ..................................... TGCGGTATTATTCGTAGGTTTGCTTTTTT 13215 35 81.1 114 ......................TT.--.CG......G ATATGAATGATGTAAAAATATCGTTAATATGTATAAATGTGATTGTTATATAAAAAATATAAGTAATAAATTGAAGCTTTGCTAGAGCAAGTGATGCGATTACGAAATTATTTA T [13183] 13065 37 67.6 0 A...........C...A....TT.CTT...G..T.GA | ========== ====== ====== ====== ===================================== ================================================================================================================== ================== 19 37 96.0 34 GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT # Left flank : CACAATTAAATGATAAACCAGAAGTCAAATCAATGATTGAGAAGTTAACTGGAACAATTAGTCAATTAATTGGCTATGAATTGTTGGAACATGAAATGGATTTGGAAGAAGATGGCATCACTGTGCAGGAACTTTTCAAAGCTCTTGGAATCAAAATCGAAACAACGAGTGATACGATTTTTGAAAAAGTTATGGAAATTACACAAGTACATCGTTATTTATCAAAGAAAAAATTATTGATTTTTATTAATGCGTGTACGTATTTAACAGAGGATGAAGTGCAACAAGTGGTAGAATATATCTCTTTAAATAATGTGGATGTCCTGTTTTTAGAACAAAGGGTGGTCCAGAACAGATTCCAATATATTTTGGACGAAAACTTTTATTTGAGTTATGAAAAAGCTTAAATTGTTATTGATTAGTGGTTCATTCTAAACTGAAATCTAGCTATGGATAAGTGATGCGAGTACGGAACTTTGGAGAAAAAATAATTCTCCGAG # Right flank : GAATACGATTATCTATAAATCAAGAACTAATCCCCAATTTATTGAAAATGATACTCCCTGTTTTATTAATATTTCATGCTTTTGTTGTACTATTTGATGATACAAAAAAGTAAAACTGAGGACCCAATTAAAGTCAAGTTAACCACATTGAAAGATAAACCTTTCAATGTGGTTAAAGATGCTTAATGAGATTCATGAAACATAGAAAGCGGATTAATTTTCTATGCTCTTTATTTGTATATTTTCTTGGGAATCATTATTGATTGTGGATTAAAAAGATAATCCGCTCCCCGTTTCACCACAGGCATATTCGTAATAGCTAAAATGAAGAGGGCTAAGAAGAAAAGTGCCAGGATTCGGAAAGTAAACCATTCTTTAAAGAGTGTGTCTAATTGTAAACCACTTTCCAACAGAATAATTAAGGGCATATGCAAGAGATAAGGGTAAAGGGTATCTTTTCCTAGGGCGCTTAAAGGTAACTTTCGTTTCGGCAATAATGC # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:-0.38, 8:1, 9:0.64, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [17-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], // Array 1 46662-46229 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABTDL010000011.1 Enterococcus faecalis strain WW_0081I contig00011, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================= ================== 46661 37 97.3 29 ....................................G AATTGTTTATTGAAATCATTTCAGTATAT 46595 37 100.0 29 ..................................... TTTACCATTTCCATAAATCAGCGAACAGC 46529 37 97.3 29 ....................................C CCACCATCAGCAAACATTTGCAAATTCAT 46463 37 100.0 29 ..................................... TTTCTCTTCATATATAAATTCATTCTTGG 46397 37 97.3 29 ....................................T TCAATTATTAAACAATTTTCCATTAGAAA 46331 37 94.6 29 ....................G...............G ATGGCCGTCACACCAATGCTGCACGATTA 46265 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ============================= ================== 7 37 98.1 29 GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACA # Left flank : CATATATCCTCATCAAGTAGTAAATGCTTCTTTTGACTTTCAAGAGGGACGAACAACAGAAGGTGGAGAAATGACACACATGATTGGCTTTGCCACTTCGCAAGAAAATACCTATGAAGATTTGGAGCAACTAAGCGTACCTGCTCATACATGGGCGGTTTTTCCAAATGAAGGTCCTTTCCCACAAACATTACAAGAAACCTGGGCAATGATATTCTCTGAATGGTTGCCTTCATCTGGTTACCAAGTCGTTGCAGCACCAGAAATTTCGTTTACGCAATATCAAGGACCAGCAGAAGCTAAGTACAGTGAAATCTGGCTCGCTGTTACAGCTACTAAATAAAGAAAACCCACCATTGAAAAATGGTGGGTTTTTCCGCCAAGAAGGAGAAAGTTTGGTATAATAAACGTGAAGAAAAAAATCAGACCTTCTAAACTGAAATCTAGCTATGGATAAGTGATGCGAATACGGAATCATGGAGAAAAAATACTTCTCCGAG # Right flank : AACTTTTTTGATTTGGCTTTTTCTCCCTTGTTTTATAGTCATGTTGTTTAAAAACAAACTATCACCTCAAGCAATCCGTAATTTTCATCACAAGATTAGAATTTTTATCATCAAAGACGAGCTGCTTCAATTTTTGGAAGCTAATCAAGTGATAAGTCAAAATGTTGATAGATTGAGATTAGTTCTTCCTTTTTTTAGGAAGGGCTTTTTTTATTGATAGAAGAAAGGGAAGAAATCTTGGTAGCACCTAAAAAAATTGTGAGAAATGCTTCTGTATTGTTTGGTTTCTGCCTCAGAAAGTTGTATACTTAGATTGGAATTATTCTATATTACATGCATTTTCACACTTTTTGGAAAAGTTCACTTGAATTTTCTTTTAGTTTCGTAGATAAAAGGAGTCATCGCTAATGGAAATGAACAATTCAGGTAAGCTTGTTTCTTTGTGTGGAGGCAAATCAGGGAGGAAATAATATGTTTGATATTGTAACATTGGCGAGAAT # Questionable array : NO Score: 6.01 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //