Array 1 964616-963392 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP077224.1 Streptococcus gordonii strain FDAARGOS 1454 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 964615 36 100.0 30 .................................... CAGAAAAGAAACCAACAATGAAAACTTCAA 964549 36 100.0 30 .................................... TGCATGTCTTGAGCGTATAGTCGTCTTTGT 964483 36 100.0 30 .................................... ACATCGTCACCAGCAAGCACAATAGCTTTT 964417 36 100.0 30 .................................... TAACAACGAGTGTATATTCTGCAAGCGAGC 964351 36 100.0 30 .................................... GAACAGCATCCCAGAATTTCTTAATCTTAT 964285 36 100.0 30 .................................... TCGTTTTGAAAATGACTTCTACAAGTTACC 964219 36 100.0 30 .................................... TTCTCTGGCGACTGGTTTAACAAGGCTAAA 964153 36 100.0 30 .................................... ATAGCCTCAAGTCCGAACTTGCCTTGATAG 964087 36 100.0 30 .................................... AACTTAAGTTTTAACTTACGGTCACGAACT 964021 36 100.0 30 .................................... AAACATATCAACTGCTTCATTGGACATTAC 963955 36 100.0 30 .................................... ATCCAACAGATCGGCATAGTGGATACTATC 963889 36 100.0 30 .................................... TTTTGCGTTTTTATTATTACGCTCAAAGCG 963823 36 100.0 30 .................................... TCTAGGAAAAAAGTGAACAGCGAAGGTCTT 963757 36 100.0 30 .................................... TATAACAAGTACTAACTTAATAATAATCTA 963691 36 100.0 30 .................................... TTTCCATATGCTCCAATTGTGACAGTGTAA 963625 36 100.0 30 .................................... CTTCCTCATCTTTACCAACAATAAGGATAT 963559 36 100.0 30 .................................... TGTATCAAGTCAATTGACGATGATAGCAAC 963493 36 100.0 30 .................................... TATAACCCAGAAAACTATTGAAATCAAGGT 963427 36 97.2 0 ...................................T | ========== ====== ====== ====== ==================================== ============================== ================== 19 36 99.9 30 GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Left flank : ATCAGCTTAATGACAAGCCAGAAGTCAAATCCATGATTGAAAAACTGGTAGCTACGATTACAGAATTGTTAGCATTTGAGTGCTTAGAAAATGAACTAGACCTAGAGTACGATGAAATCACCATTCTAGAGTTAATCAATGCTCTAGGAGTCAAAGTTGAAACTCTGAGTGATACACCTTTCGAAAAGATGCTAGAAATTATCCAGGTTTTTAAATATCTTTCCAAAAAGAAACTCCTTGTTTTCATCAATGCGACCGCCTATCTATCAGAGGATGAGTTAATAAATCTGATAGAGTATATCCAACTCAATCAACTGAGAGTCTTATTTGTTGAACCTCGAAAAGTCTATGATTTCCCGCAATATGTGCTGGATCAAGACTATTTCTTGAACCCTGAAAATATGGTATAATAAGAGTAAGAATTGGAACTTGACGAGCTGAAGTCTGGCTGGGACGAATGGCGCGATTACGAAATTTCGTGAGAAAAATTTTTCTACGAG # Right flank : AATATTAAGATTTAATTCAATTCAACCATATTAGCTAGAGGTTGGTGGGGAGTTCAAATGAGAAAGCAGATAGAAAAGTTATTAAACAGCGATATAAGCACAAGCGCAATCGCTAAAGGAGCAGGTGTTCCTTGGTCTACAGTAGCGGACCTTAGAAAAGGGAAAACCAGTATCGATAAAATGGCCCTGCTTACAGCCGAGAAATTAAATGATTTTGCGGAAGAATTAGAAGCGGAAAAGGACGATGAGTTTTACAATTAATCTATCCAAAAACAACCACCTATTTAGGTGGTTTTTTCAGTATCTATCACTGCTTACTAGAAGAAGAACTTGAGCTGCTTGAGCTGTCGCTGCTGGATTCAGAACTGTCTTCTGAGGAGCTGGTGCTTTCAAATTGTTCTGGGTGGAGCGCTCGATAGCTTGGAGCATCAAAGAGGTCAATGGTCGATTCGCCCTTACGTTGGCTATAGAGACTGGTTGATTGGTCTCCTTTTTCTTCC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //