Array 1 1841837-1839786 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP028293.1 Acidovorax avenae subsp. avenae strain INV chromosome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 1841836 32 100.0 35 ................................ AGCGCCTCGGGGTTCTCGTAGCCGGCGTCGGCGAG 1841769 32 100.0 35 ................................ ACCCAGGCCGTCTTGCCCGTGCCGCGTGCGCCAAA 1841702 32 100.0 38 ................................ GCTTGCTGCGGGTGACGTGTTCGTCTTTTGGCGCTTGG 1841632 32 100.0 36 ................................ ACACCGTCACGCATATTGTTGAACGTGTCGCCCAAC 1841564 32 100.0 36 ................................ TTTTGGGCGCTCACCTGGACGAAGAAGCAGCGGCCG 1841496 32 100.0 36 ................................ ACACCCATGACAGCGGGGGCAGAGGCTCCAGCGCCA 1841428 32 100.0 36 ................................ GACCAGCGTGGTGCCGCCTGTGGCCGCGGTCTCGAC 1841360 32 100.0 34 ................................ TTCTGCGTGGCTTCCAACTGGGCTTCTAGCGAAT 1841294 32 100.0 35 ................................ AAGGGCGAGAAGGCCCTGTTTCTGCAGGCGCTCAC 1841227 32 100.0 36 ................................ ACGCCGTGATGGGTGGCGAACGGTTGCCGCTGGAAC 1841159 32 100.0 35 ................................ TTCGGCGTGTACACCGTCGAAAGCGGCGTGCTGCT 1841092 32 100.0 35 ................................ CCATCGTTGTCAGTGAAAGTTTTGATGGTTTTCAT 1841025 32 100.0 33 ................................ CGAAGCCGGCGAAAAACGCCTTGATCGGCTCCC 1840960 32 100.0 35 ................................ CCCCAGGGCGAAGGACTCGCGCAGCTTGGCAACCA 1840893 32 100.0 34 ................................ GTCACAGAAATGGCGAGCCAGCGGCGCGGCCTGC 1840827 32 100.0 37 ................................ CCGGGGCAATGCCAAAGGCGTCCAGGGGCGACCATCA 1840758 32 100.0 35 ................................ GCGGCCGCGTGGACGTGCCCTTGCAGAACGTCGAG 1840691 32 100.0 36 ................................ GATCGCGTGATCGCCTACTTCGGCACGGCCAGGGCG 1840623 32 100.0 35 ................................ TTCTATGGCCACGAGATCACCGAGGCGGCGGGCTA 1840556 32 100.0 35 ................................ TCGGCGGTGTACCGCCCTGCCTTCGTCGTGCAGAT 1840489 32 100.0 34 ................................ ATAGTGTCAGGTATCGCGCCCGCCCTGGTGCCCG 1840423 32 100.0 36 ................................ AGCTTCACCGCGCCCAGGTGGCGGGACTGCGGGAGT 1840355 32 100.0 36 ................................ GGCGTCCTGCTCAGGGCCGCCTTCCACCGCGCCGGG 1840287 32 100.0 36 ................................ TCCAGCTCCTTGGCGTACTTGAGCTCCACCTGGCGC 1840219 32 100.0 34 ................................ AGCCGCTCGAACGCCTCGTGCTCCACTTCGGTAA 1840153 32 100.0 34 ................................ GTCCGCCTGGGTTACCTGGACCCGCGCCAGATCG 1840087 32 90.6 36 .........C.C.T.................. AGGTAGAAACCTGGCATGCTCCAGTTGCGTGTCTGG G [1840073] 1840018 32 90.6 35 .........C.C.T.................. TGCAGCGTGGTTGTGATGCTCATGTCGCCGCAGAT 1839951 32 96.9 36 ............................G... ATAGGTGGGGATCATGAACTGGTGATGCTCTCGGGT 1839883 32 90.6 35 .........C..........TC.......... ATGGCAAGCGGCAAGACCACGCCGCCCCAGCACCT 1839816 31 78.1 0 .C...A...-..A....T......A.C..... | ========== ====== ====== ====== ================================ ====================================== ================== 31 32 98.3 35 GTCGCGCCCTGTGCGGGCGCGTGGGTTGAAAC # Left flank : CAACGTGGTGCTGAACGTGGCCTTCGGCCAGCCCACCATGGCGGTGGACACGCACATCTTCCGCGTGAGCAACCGCACGGGCCTCGCCCCCGGCAAGAACCCGCTGGCCGTGGAAATGCAGTTGCTGAAACGCGTGCCCGCCGAATATGCCGTGGATTCGCACCACTGGCTCATCCTGCTGGGCCGCTACGTCTGCCAGGCGAGAAAGCCGCGGTGCTGGGAATGCGTGGTGGCGCCGTGGTGCGATTACCAGCCGAAGACGCCAGCGCCCTGAGGGCGGGTCCTTCCGCTCCCTCCCTTTCCTTTTTTTCTTGGTGCCGGGCGTTGCGAACCCCGAGTGACCGGCTTGTCCGCCTGGGGTTCGCGCGGGTGCAAGTGGTTGAGGGCAAAGGGAATTTTTCCTGGGTGGGGGGCGGGGAGCGGAAGCTGCGGGTCGGTTGGGGTGGGTTCGCGGATGCGTGGGAGAAATGGCTGGGGTGGCGCGGGTTTATAAAGGTGCC # Right flank : AATAACTGTACGGCTCGCATCACGCGCGAGCTTTCGGCAGCATCCTGGATGGGCGCGCGGATGGAAACAACGAGAGGCGTAGCGGCAAGATGTTCGTCGTCGATCCACGCCCCGTGCAAACATGGAATGGGTGGGTTGCAATGTCCGCCGGGTGCACCCCATCCATATCCAGCGGCATCGCTGCGCTTGCTCTGGGGCTCTTACATCGGAGACCGATTGACCCCCATCCGCATCGCCACCCGCCGCTCCATCGGCAACCCATGGGCAGCCTCCACGTCCATCACCCCCTGCAGCCGCGGCCCGGGCGGCGAGACCGGGCGGAACCCCAGCCTCGCGTAGGCTGGCGCGCTCCATGGCAGGTCGGCGAAGGTGGTCAGCGTCAGCGCCACCAGGCCCTGCGCCGCGGCATGCGCCTGCGCGGCCTGGATGAGCCTCGTGCCGATGCCCATGCGCTGCCAGTCCGCGTGCACCGACAGTTCCCAGAGATGCAGTTCCTGTCC # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCTGTGCGGGCGCGTGGGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCTGTGCGGGCGCGTGGGTTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [25-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //