Array 1 42400-43159 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_BCYD01000060.1 Bifidobacterium pseudocatenulatum strain CA-K29b, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                	Insertion/Deletion
==========	======	======	======	====================================	===============================	==================
     42400	    36	 100.0	    30	....................................	GGAGAAAAAATGCCACACAACCGCGTGCGA 	
     42466	    36	 100.0	    30	....................................	TGTCGTCGGATGCGAGCTTCACGACGCCTT 	
     42532	    36	 100.0	    31	....................................	TCCATGTGGACGCGCCAATATCCGCCAAGCT	
     42599	    36	 100.0	    30	....................................	AGCCGTCTCCGTTGTGGTGTTCCATGCGGA 	
     42665	    36	 100.0	    30	....................................	TCACGTCCGAATACTGCCAGCCGGTCGTGT 	
     42731	    36	 100.0	    29	....................................	TCAGTCAATATCGACGGTAATACTACTGC  	
     42796	    36	  94.4	    29	...........T.....................T..	TCAGTCAATATCGACGGTAATACTACTGC  	
     42861	    36	  97.2	    29	...........T........................	GAAGGTTTTCGCGGACGGTCACATCGAGG  	
     42926	    36	  97.2	    30	................................T...	CGGGTCTGAACGTCGGCGGCACTCACAGAT 	
     42992	    36	 100.0	    30	....................................	TGTCACACGGTTGAATAAGGTCGGCAATGC 	
     43058	    36	 100.0	    30	....................................	TCACGAACGGGAGCTTGTCGTCTCCGACCT 	
     43124	    36	 100.0	     0	....................................	|                              	
==========	======	======	======	====================================	===============================	==================
        12	    36	  99.1	    30	GTTTCAGATGCCTGTCAGATCAAAGACTTAGACCAC	                               	       

# Left flank :   ATTGCGCAGGAGTACTAGATTATGATGCTTTGTTTCAAAAGGCTGCAGTTAAGAAGTTAAATGACGGATTTAATCCTGAAGAATTGAGTAGATTATTGTTGTTACAAACTGAGATAAAGTCGATTATTCAAGAAGAAATATGGAGAGAGAATTTGCCTCTGAGTATTCTTGATGAAGCTGATATAAAGTCAATGATAGCAATGGCTAAACCGCGTGTTGATACCAGTTCTCTGGGTTCTCTTTATGATAAAATTCAACTGGTAGTTGATACTGCCGGCGCTCTTGCCGAGGGCAGGATGCTTGTGATGCTTCATATAACTCAATATTGTGATAATGGCCAATTACTTTATTTGCATCGAGAATTATTAAGACACCATATGCAGCTTCTGGACCTGGAATGCTGCGACAAAAAAGTCCTTTTGACAGAGGGAAGAAGTCGGTATATCGATGGAGATTATGTTCAGTTCTCATAGAACGTTCAGGATTCTCCAAGGCTATCG
# Right flank :  CCGGAGGGAAAGTGGATGTGACCTTGACAGAGTTTGTGCTTGAGGATCTTGTGCCAGTCGGCGAACTCAGTAATGGACGCACCGCTACGGTGCTGTCTAAGGCCGACCGTGCGCCGGTCCTTGTCGTCAAACGGAACGCTGTCCTACGTGCTCATGGGTATCAACGATTATCAGAATTTTCTCGACCGTCTTAGGGGCGAAGAGGACGTTATCCATGCGCAATGTGTTTTGTTAAATTGAAGTAGTCCAAAATGGCGTGTCAATCCAGTCCGAACGAGGTGATGACGTTTTCTTGGACTCCCCGACCGGGAGGAAAACCCCTTATGGCGAAGTACAGCAGGGAGCAGCGTGACAGGGCCGTGGACCTGTACGTCAAATACGAGCGCTGCGCCCGCCGACGTGATCCGCGAGCTTGGCTATCCCAGCAAGGGCGCGTTGCTGTCGTGGTACGCGGACCGGCTCGAGGAGGAGCGCACCGGCGTCCCCTCTAGGCGCGGGGA

# Questionable array : NO	 Score: 6.21
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTCAGATGCCTGTCAGATCAAAGACTTAGACCAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:55.56%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-1.80,-2.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-2] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [60.0-46.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.68,0.37   Confidence: LOW] 

# Array family : NA
//