Array 1 2880854-2877466 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP047973.1 Acinetobacter baumannii strain DETAB-P2 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 2880853 28 100.0 32 ............................ TATTTATGGGTCTTTGACGGTTCCGTTATCTC 2880793 28 100.0 32 ............................ TTTATTTTCACAAGACAAATGTGATCCTAATG 2880733 28 100.0 32 ............................ ATGTACGACGGTGGCTCATTAGGTGCCATGGG 2880673 28 100.0 32 ............................ ATGAAACTAATCCTTGATGTTGAAGTGCCGCT 2880613 28 100.0 32 ............................ AACAACTCAGCAAGTTGATGCCGAATTTATTG 2880553 28 100.0 32 ............................ TTCTTACGAGGCTGTGCCGACGAGCAACACGT 2880493 28 100.0 32 ............................ AGAAACATGGCCATTTACATCGAACTTAGTAA 2880433 28 100.0 32 ............................ TTCAAAATCGATAGGGTTAGATAACTCGAAAG 2880373 28 100.0 32 ............................ TCAAGCTCAAGCAACAAGGTGTCTACAGTGAT 2880313 28 100.0 32 ............................ TACCTCAGTGCAATATCCTTGTGAATTATAAG 2880253 28 100.0 32 ............................ ATAACTTGTCCATTGATGTTCTGTATAAATCT 2880193 28 100.0 32 ............................ GAAAGATCAAGACCGTAGCTATTTTCTTTGTC 2880133 28 100.0 32 ............................ ATTACTACCAAAAGTAACTTCAAAAGATCGAA 2880073 28 100.0 32 ............................ TTGGCGAAGATGAACAGCACTATGTAGGGAGA 2880013 28 100.0 32 ............................ AGATTATTGAGCAAATAATTGCACATTAGTAA 2879953 28 100.0 32 ............................ TCAACCTGAACGCGGACATACATGTTCTGTTT 2879893 28 100.0 32 ............................ TGGTTTAGCTCAATCGGCTGTTTATTCTTATG 2879833 28 100.0 32 ............................ TCAGAGTTGCCGTAAACAATACGAATACGCTG 2879773 28 100.0 32 ............................ TATTATTTACTCATGCGTTTACAGTGCATGAA 2879713 28 100.0 32 ............................ AACAGTTTGTCCGATTAACTTTCCCATATTTC 2879653 28 100.0 32 ............................ AAAGTCATTTCTTCAGTGCGGTAGGATACCGA 2879593 28 100.0 32 ............................ TGGGTCTGTCACGCCGTGGTTATGCTCTGGCA 2879533 28 100.0 32 ............................ ATTCTCTAACCCTGTGTGATAAAAGCCATTCG 2879473 28 100.0 32 ............................ TTATCAATCATCTCCTTAAGCTGCGGTGTACC 2879413 28 100.0 32 ............................ CAAACCCAACATTACAAGAATGGCTAGATTTT 2879353 28 100.0 32 ............................ TCAAAATCGATTGGATTGGACAGCTCGAAAGT 2879293 28 100.0 32 ............................ TGAAAGTAGGCAACTTTAGAGAGTGAATTTGA 2879233 28 100.0 32 ............................ TGAAATTGAGCACATCAAAAATATAATGTTAA 2879173 28 100.0 32 ............................ ATCATGAGCACAGTGCTCCGATCGGACAGGTC 2879113 28 100.0 32 ............................ AGGAAGAGATTGAACAGGGTAAGGCTGTGCCG 2879053 28 100.0 32 ............................ TAATATCACCTGACGATCTTGTAGCGTTTATC 2878993 28 100.0 32 ............................ TGCATTGTAGGCCATGAGTGCTTTATCCATGG 2878933 28 100.0 32 ............................ AATATCGTTGCGCTTCGCAAGATTTTCACTAG 2878873 28 100.0 32 ............................ TGGAACGTTTTCCCAAACAATGATGGCTGGCT 2878813 28 100.0 32 ............................ AGAAAGTTGACACGCTCTATCGTGAATATGAA 2878753 28 100.0 32 ............................ AAGCAGCTTTGAAAGATTCCCAACCACGAACA 2878693 28 100.0 32 ............................ TCTTCCATAGACTGGTAATACTCAGGGCTTAA 2878633 28 100.0 32 ............................ TGTTGAAAGCCAAGGTTTTGAGAGCCACACCA 2878573 28 100.0 32 ............................ ATTCAGGGACTAATCAGAAGCGTCGTGAGTGC 2878513 28 100.0 32 ............................ CGCTTTTGCAGCTTCAGCATGTTTATGCCTTG 2878453 28 100.0 32 ............................ ATGAGTGAGTTTAAAGTCGGGGATCAGATTGT 2878393 28 100.0 32 ............................ TTTCAAGAACCATGTCTTCAACATAGATTGTA 2878333 28 100.0 32 ............................ AACTACGACAAGCGATTGTTAGGCATCCTTCG 2878273 28 100.0 32 ............................ ATGCTTAAAATGTCGGATGCGATGGAATTGCC 2878213 28 100.0 32 ............................ GGCACAGGCATTGCTGAACCGAACGGAGTTAA 2878153 28 100.0 32 ............................ AGCAGGCAAAATATTTTTCTCTGGTGATGCCA 2878093 28 100.0 32 ............................ AGTGCATGTCGATGTAATTATGTTTATGCTTG 2878033 28 100.0 32 ............................ TTTCAAGAACCATGTCTTCAACATAGATTGTA 2877973 28 100.0 32 ............................ AACACGAACCACACCGCTTGTAATCGTAATGT 2877913 28 100.0 32 ............................ TTTAACTTCGCCCCCCTCGCGTGTCATCTCTT 2877853 28 100.0 32 ............................ AAGTAGGCAATGCTAGAGGTATCCTCAAAGGT 2877793 28 100.0 32 ............................ TTGTACAAGCGTATTGAATGTGCCCTCATCAA 2877733 28 100.0 32 ............................ ATCATTGTTTTAAGTGATTCCCAGTGCTGACC 2877673 28 100.0 32 ............................ CTGTGGGTTGATGGTCAAAATATGGACGTTGG 2877613 28 100.0 32 ............................ TTAAGTGGTGTTATCAAAATGAGCAATGATTC 2877553 28 100.0 32 ............................ AATTAAGCACTATCGACACGTTACAAACTAAG 2877493 28 92.9 0 .........A.................G | ========== ====== ====== ====== ============================ ================================ ================== 57 28 99.9 32 GTTGTTCATCGCATAGATGATTTAGAAA # Left flank : ACTTTAAAAATAGAAGCCGTTTTACCTGCATTTGCCTGATAATCGGTTGGAATAAGGAAGTCTTCATTTAATAAAGTTCGAGCACTGAGATAGGGTAAATCAAGTGCTTGTTGTTTACTTAAACGAATCCCGCCTTTTTCAATATTGGAATTAATCGTCTTTAAACTAAAGTGTACAGATTCTTCTAAAGCGTTTATAAAAATATCAGTTTGTGGTTCAGGCATTATCTTCCCCGTTTTGTTATCTAGCCAATTTTTAACATATTATTTGAAAAATGAAAGTATTGAAGGAGAGAGTTGCAACAAATTAAGTCGTAAAGACAATTGGATGAAAATATTATATGCTTCATAAATTTAGCCTAAGAAGATTAGGTTATATTTTTTAAAAATGGAAAAATTAATATAATTCAATAGATTATATTGTTCTTCTATTTTGAAGGTTTTTAATTCATTAAAACTTTATATTATTGTTTTTAAGAGTTTTGTTTTTACTTAGCTCTA # Right flank : AGTTTCTTCCAAAATTTAAGACGACGTATTTTGTCGTTAAAAGGTCGTATTAAACTGATTAAAGCTTTCTCTTTTTAAAACAAAAGATTATATTTTTATGACATTCAAACTTTAACAATAAATTATGCATGTCATTCTCATCTCGGCTTGTGAAAAAAGAGCTTTAAAGAAAACAAGAGCAATTTTGGATAGCTATGCTATTCGTACAGGATATTCGTCTTGGCAAGCACCAATGACAATGGAAGGCTTAAAAGAAATTCGTAGCGCATTAAAAAAAGTAGCCACTCGACAAACTGCGGTAGCCGCTTACATTAATTTTGGTGTACGAAGAATGAAGCTTGCATGGGTTGTTGGAGCAAAACATAAATTTGCCCATGACGGTGCATATCCAGTTGCATCGACCAAGAAACAGCAAAAGTTACTCATGCTTGATGAATGGGTCAAAGTAAGTAGCTTATTGGCAGGTGCAGCAGGGGACATGCATGATATTGGTAAGGCCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: R [matched GTTGTTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [70.0-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 2885943-2893650 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP047973.1 Acinetobacter baumannii strain DETAB-P2 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2885943 29 100.0 31 ............................. CCACCGCCACCACCACCACCTAGCAATGATC 2886003 29 96.6 31 ............................G TTTGGATTTTTATGTAAATTCTGTAGATGAG 2886063 29 96.6 31 ............................T CCGCCACCAGGTGGAAATAATGATGCGCTTT 2886123 29 96.6 31 ............................T TGTTGAATAGCGTCTTTCCATTTGGTTCTAT 2886183 29 96.6 31 ............................T GCAATAACAGACGTTGCGACAAGTCCAGTTG 2886243 29 100.0 31 ............................. AGTCCAAAACGCATTTTTTGGCCTTCCTGTT 2886303 29 96.6 31 ............................G CGTAGCTCGGTTAATCCCGTTCTTAGGCTAA 2886363 29 96.6 31 ............................C ATGTTATAAGCTCGATAATTTAAAATTGGCG 2886423 29 96.6 31 ............................C TTATAGCCAAGTACGGAAACATGAATATGAC 2886483 29 96.6 31 ............................G ATCTGATGAATCCTGAAAAACGTAATGCAGA 2886543 29 100.0 31 ............................. CAAGGACAAGTGTATGAACATTCTCCAGCGT 2886603 29 100.0 31 ............................. TCCGGGTAGAATGTGGTGCCATTGCCAATAG 2886663 29 100.0 31 ............................. GTTAGAACGGATGCACGATGGTTTCAAGACT 2886723 29 100.0 31 ............................. GAAGTATTTTTTGCAGTCGCCCTGAGGCAAT 2886783 29 100.0 31 ............................. TTGAACGTACCCGGAACATAACCTGTACCAC 2886843 29 100.0 31 ............................. CGCTCGTTGACGCCATCAACTAATTTTTGCT 2886903 29 100.0 31 ............................. CTTGACCCGTTATAGATAAATCAGCAATACC 2886963 29 96.6 31 ............................T GAATGTAAAATTAGCCGATGAGGCTCATAAA 2887023 29 96.6 31 ............................T TTCTTTGGCTCATCATCCGATTGTTCATTCA 2887083 29 96.6 31 ............................T TTGGAAACGTTGCTAAAGTTGCTATGGATAC 2887143 29 96.6 31 ............................T GCATCCGTGTCAGGATCTTGCAACTGCCAAT 2887203 29 96.6 31 ............................T TCATTACCGCTTTGTTGAAGCAAATAAAGCC 2887263 29 96.6 31 ............................C TTAGCGTCCATTGCAACTTTAGCAACATTTC 2887323 29 96.6 31 ............................T AAAGAAGCACCAGGACCAATCGATTATTTCC 2887383 29 100.0 31 ............................. TCAAAATCAAGACCAAAAATTTTCCGAGTAT 2887443 29 96.6 31 ............................T AGACAAAGAGCAGCTTTACAACCAAATCAAT 2887503 29 100.0 31 ............................. ATCTGTACATTTGGGGAAAAAGCTCGTCCTA 2887563 29 96.6 31 ............................T GAAATAACAACGGGCTTATTCTGATCACCTG 2887623 29 96.6 31 ............................C TGAGCAAAACAATAACATTTAGACGTTTTCT 2887683 29 96.6 31 ............................T ATCACCATCCTCAATCAATCTCCTACAGTCA 2887743 29 100.0 31 ............................. GTTAAAAGAATTTGGATTGCATATTCTTTTT 2887803 29 100.0 31 ............................. AAGTAGCGGAGTACTACGACATGTTAAAAGC 2887863 29 100.0 31 ............................. GCAACACGGCAATATGTTGGGATGTGGGACG 2887923 29 100.0 31 ............................. TGTAATGCGAGATATTAAGAAAATCATTAAG 2887983 29 100.0 31 ............................. GCCCCCATTACACGCGGGACGATATGAATAG 2888043 29 96.6 31 ............................T TGTTCATGTCGCACATAACGATAAATCTTTC 2888103 29 100.0 31 ............................. TCATCGTAAGCATTGAATCGCGTGCCTTCAA 2888163 29 96.6 31 ............................T TTAAAGCCCCTTTTTAGGGGCTTTTTTATGC 2888223 29 96.6 31 ............................T TTATTTGGCTTTGCATTTAAATCCTTTACTC 2888283 29 100.0 31 ............................. TTCTGCCCGCTTCCGAGACCATAATCATGAC 2888343 29 100.0 31 ............................. TCCAGTCATATCAACATTCGGATTGACTGTA 2888403 29 100.0 31 ............................. TCATATAACGCGCTTCAACTTGAGCCTTTGC 2888463 29 100.0 31 ............................. ATCCCGAAGATGGCGAAATTAAGGTAGTCAA 2888523 29 96.6 31 ............................T GTAGATGGACTTTGGTGTGACTTAAATATTC 2888583 29 96.6 31 ............................T TTTCGGGCATTAAAAAGCCCTCGAATTGAGG 2888643 29 100.0 31 ............................. ATCAAGGCAACCCCTAGTCCAGTAGATAAGC 2888703 29 96.6 31 ............................T TTACTGGAATTGAGCAAAATCGTATTCAATA 2888763 29 96.6 31 ............................T TAACCACTACCGCATTTGCTGCTGCAAGTTC 2888823 29 96.6 31 ............................T TGCGTTCCACTGTTTTATTGATTTTTATGTC 2888883 29 100.0 31 ............................. GCTTGTAGATGATGGCAAAGGTGGTCAAGAG 2888943 29 100.0 30 ............................. AAAAAGAAACAATTGAAGTTTCAGAAGTTG 2889002 29 100.0 31 ............................. TTTTCATGACGACAAGCCCATTGGGACCAAT 2889062 29 100.0 31 ............................. GAAAGCGCTTGGATTGGATATTGCGGTTATC 2889122 29 96.6 31 ............................T TCGGCTAATTCAAATTTAACTCGATTTTCAA 2889182 29 96.6 31 ............................T ATCGACTTACCTGTTCTACTGATCACATCCA 2889242 29 96.6 31 ............................T TCAGAAATAGATTTAATGCTAAAGGCTTTAG 2889302 29 96.6 31 ............................T AGCAAACTCGGAGGAAGCTTGGAATTTAGTT 2889362 29 100.0 31 ............................. GCAAAGTCCGCAGAGGGAGCGTTTGTTAATG 2889422 29 96.6 31 ............................T CTGGAATGCCTGCCTCAAGCAAGCCATCTAA 2889482 29 96.6 31 ............................T TTCTTATGCTGCTGATAACTTTGAGCTGGAC 2889542 29 96.6 32 ............................C TGAAAAGCAATAAACCCACTCAGTAAAGTGGG 2889603 29 100.0 31 ............................. ACAGTGGAAAGATCGCACGGTAAAAATTTTG 2889663 29 96.6 31 ............................T AACTGCCAATCAAAGGATATTTGAGATGGAT 2889723 29 96.6 31 ............................T TTTAGGGCGCTCATTGCTAGCGTATCTTGCA 2889783 29 100.0 31 ............................. CTCAGTAAAGTGGGTTTATTTGGGTTTAAGT 2889843 29 100.0 31 ............................. TCTTGGTTTTGATCTTGAGTAGTATCAACCT 2889903 29 96.6 31 ............................T AATCGCTGCAATTCATTGACAATATCGTCAA 2889963 29 96.6 31 ............................T CCGTATATTGATTCGTAATCAGCAATTGCTT 2890023 29 96.6 31 ............................T GTGCCCAAGATACTATCATTGTCGCCACGTT 2890083 29 100.0 31 ............................. ATGATGCCGCCGATATTGGTGTGAATCCACG 2890143 29 96.6 31 ............................C GTAATCGCCGTGAGAGAGTCGAGCACAAATT 2890203 29 100.0 31 ............................. CAAGACGCTTGAGGTCAGCCATGTTCACAAG 2890263 29 96.6 31 ............................T CTTTGAAAGTACCGTCCCACATCCCAACATA 2890323 29 100.0 31 ............................. AACCGACAAAACAAGGTGAATAATCTAGTCC 2890383 29 100.0 31 ............................. ATACTGCAAACATTTTTCTAGATGGTGAATA 2890443 29 100.0 31 ............................. ACATTCTCCGCCCAGCAAATAATTGCTTTGA 2890503 29 96.6 31 ............................T TGCCGCGTGGGTAATGAACTGCTTTTTGTAC 2890563 29 96.6 31 ............................G TAATCGAATTAGTTGCTCATAATGTCGAAAG 2890623 29 96.6 31 ............................T TCTGGGTTCGGCTCTAATTCCGAAAGCTCTA 2890683 29 96.6 31 ............................G ATTGTTCTGCCTTGCCGGGAAGCTTCATTAA 2890743 29 96.6 31 ............................C AATTTTCTTGCGCAGCTTCTTCTGCATTAGC 2890803 29 96.6 31 ............................T CTAAGGTGCTGCTTGAAGTGCTGAATAGGTT 2890863 29 100.0 31 ............................. ATTAAGCAAGATATTCAAAATACGAAAGATC 2890923 29 100.0 31 ............................. CTAGATCCAGTGTTAATCTGCCAAGTGAAGT 2890983 29 100.0 31 ............................. GAGTCTGCCCCGATCAATCCTTCAGATCCGA 2891043 29 96.6 31 ............................G AAAGAGCGATTTCTTGTGTGGGCATCAATTC 2891103 29 96.6 31 ............................T AACCCTATATGCTTATGAGCCACCGATTTAA 2891163 29 100.0 31 ............................. CAAGAAATAGCAGCAGGCCACCGCATTGATA 2891223 29 96.6 31 ............................T TCTGCGGCTGCTTTGGAGTGGTTATTGTTCA 2891283 29 100.0 31 ............................. AACATTTTACACAGATCAAGCAGCGGGATTT 2891343 29 96.6 31 ............................T ACGACAAAAAGGCTAAAAGATACGTTATTAA 2891403 29 100.0 31 ............................. GTAGTTAGCAACTCATGGAAGGTTTCCATAC 2891463 29 100.0 31 ............................. AACTCAATAGCAGTGGCGTAAGGCGCATTCG 2891523 29 96.6 31 ............................T TGTTGTGTTGAAGCGTAATGATGTGAAGGAT 2891583 29 96.6 31 ............................T TTATGGTCATCAAAGAATGCTTTGATTTGCA 2891643 29 96.6 31 ............................C CGAAAAGCACGCTTTTCATGTTCAGTGTGCC 2891703 29 96.6 31 ............................T TCATCCAAACTTTAAGCGGCGTATGAGTAGA 2891763 29 96.6 30 ............................T GTCCTTAGCGGCAGGTTTTTTATGCCTGAA 2891822 29 100.0 31 ............................. ATGGAGCACGATAACCACAAGGTTCATAAAC 2891882 29 96.6 31 ............................T GAATGTAGAGACGCAAGGAGGGAAGTTAAGG 2891942 29 96.6 31 ............................T CAACATTGTAGGCGCGACTATTGGCTTCTTT 2892002 29 100.0 31 ............................. TCATCACTTGATTTCTTGACCGTTTCTACAA 2892062 29 100.0 31 ............................. AGCACCCCCGTTTGGACAATGAACAGCAAAG 2892122 29 96.6 31 ............................C ACAGGTGTGCCAAATTGAATTGCATCATAAT 2892182 29 96.6 31 ............................G ATAGCGGTGCGTAACGTTCCCGCCACTGCAC 2892242 29 96.6 31 ............................T ACCGGAAGCGCTACCGTTCATTGATGACGAA 2892302 29 96.6 31 ............................G ATTGATATTCCTGGTATCAAAGAAAATGTAG 2892362 29 100.0 31 ............................. AGCACCCCCGTTTGGACAATGAACAGCAAAG 2892422 29 96.6 31 ............................C ACAGGTGTGCCAAATTGAATTGCATCATAAT 2892482 29 96.6 31 ............................G GTATTAGTGCGAATTGGCTTTTAGCCCACGC 2892542 29 89.7 31 ....C.......G...............T TAAATGCTCAACTACTTCTGTAGCTAATGGA 2892602 29 86.2 31 ...GC........C..............T CTCAACTCATTGATTTTTTCTTCTCTTGCCA 2892662 29 89.7 31 ...GC.......................G TGTTTTTCGATATGCTTCGAAAGGTCATCCT 2892722 29 79.3 31 ...TC.....A.CC..............T GATGGTTCAGCATATATAGCTAGACGTACAC 2892782 29 86.2 31 ...GC......TG................ TCACCAAACACAACCAAAGGTGAACGGGTAT 2892842 29 82.8 31 ...GC.......CC..............T TATCTGCCATACCCGACTGCTTTGTTCCTAA 2892902 29 93.1 31 ...GC........................ TTTTTATTCCAAGGGCTTTTGCTTCTTGTGA 2892962 29 86.2 31 ...GC......T................T TCAAATGATTTAATGAGCTTGTAGCCATTTT 2893022 29 89.7 31 ...GC.......T................ CGTCTTCTAATGATGGACTTTAATCCAATAT 2893082 29 82.8 30 A..GA.......TC............... TCTCACTGAAGATATGACCATCACTTTCTT 2893141 29 79.3 31 CG..C.......CC..............T TTATAACCACCAGTTAAAGTATTGACTAAAA G [2893143] 2893202 29 75.9 31 ...GC.G...A..C.AT............ CAATCGGGGTCGTGGTCAAAAAGATTATCAG 2893262 29 93.1 31 ....A.......................G TGTTGATGTTGTTGTTCAGATCGTTTTTGGT 2893322 29 82.8 31 ...GC....T..TC............... TTAAAGCATTTTCATATGAGCCTTCCTCATT 2893382 29 79.3 31 ...TA......TCC..............T TCGGATCAGTCCAGTCATCATCCTCGTCAAT 2893442 29 82.8 31 T..GA.......G...............T ATCATTGCGCGACAGAACGCATCAATTAATG 2893502 29 86.2 31 ...GC.......CC............... GATCTATGCAAGATTTATTGGTCTACATTAG 2893562 29 89.7 30 ...TG.......................C AAGCTGATGCTTCCTTATGGTTACAGTCAG 2893621 29 82.8 0 .G..C...................AT..T | G [2893625] ========== ====== ====== ====== ============================= ================================ ================== 129 29 96.1 31 GTTCTTCATCGCATAGATGATTTAGAAAA # Left flank : ACGTTGGGCTAAAACGTTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAGTTTATTCGGGATGAAGGAAAAAATTCTCACGACACTATTGCTGATATAGCCAACAGCTACCTCGATCATGGAAACTATATTGCCTATGGCTATGCGGCAGTTGCTTTAAATGGAATGGGAATTAGCTTTGCCTTACCTATTTTACACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTCGCTGATCTAGTTAAAGATGCTTTTGTAATGCCAATTGCTTTTACATGTGCAGCAAAAGGATTAAATCAGAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGCAGTAAAATCAAATAAAATCATACATTTAATCCAAGTACCTCATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : TTTGAATCTTAAAAGAAAAAACCCCGAAACTTACGTTTCAGGGCTTTTCACGAATCTTGGGATGGCGTCAATTGAACAAACCCAATAAGCCACTGTTTTATATAACTTAAAATTTATTTAAAAATCCCAGTGTACATCACAGTGTACAAATTATATGTTGCTAGGCCATTTTCTCTAAGTTTAGTTGCTATATCGGGAGTTACATTCATATAAAAACACTCCCCCGCGCGCGCGCGTTTTCTTGATTATTGTCTGACGGTATAGCGGTTTGCTGTGTTTTTTGGCTTCCATCATTTGATTGAGGCAAAATAGAGTATTTTAGCTGCTCCCCTTATTGGTGGCTCAGGGGTCCCGAAAATTTGGGAGATTGAACATGGTGACTTTGGGTAACTCAGTTATCTACTGACTATCTTTAAGCTACTCGCATTTTAGAGATGTCCACACTGTATGACTGTACGAAAGTTTCGTAGTTCATTACCCAACGGAAATTTTCGCATACC # Questionable array : NO Score: 5.51 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.45, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-72] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //