Array 1 27695-26812 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAATEJ010000022.1 Streptomyces sp. PRB2-1 22, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================================================================================================================================== ================== 27694 29 100.0 32 ............................. CATCCGCTCCCGCAGGTGGGCGCCAACGGCGG 27633 29 100.0 32 ............................. CGCGCTACACGAGTGAGCGACGTCAGCACCTG 27572 29 96.6 32 .................C........... CTGCCTGGGCAGGGTAGTTGGACGTCCCGGCG 27511 29 82.8 33 ...........T..C......AG...T.. ACGCCGCCGGCCGGGGTAACGCCCTCCAGCGGG 27449 28 75.9 93 ..A.-......T..C......AG...T.. GCCCGCTCCTTCTCCCGCAGTGCCTCGGCGGAGCACCTCCGCTCGCGCGGAGAGGACGACCAGCACTTCGGCGAAGGGGAGGGCCAGCACGGA G [27423] 27327 28 79.3 31 ..A.-......T..C......AG...... CAGGAAGAACAGCTCGTCCTGGGCCCACGGA TA [27301] 27266 28 72.4 33 ..A.-......T..C......AG....AC CAGCCAGGAAGAACACGAATCGACGGCGCCGGA 27205 28 72.4 94 ..A.-......T..C......AG...G.T CTCTTCGAGCGGCAGCGCGCCGCCGGCATCGGAGCACCTCCGCTCGCGCGGAGAGGACAACGCGCCGCTGTATGCCGCCATGGCCACTCCCGGA 27083 28 79.3 32 ..A.-......T..C......AG...... GGCACCGGCGCCACCGGCGGCTCCTTCACGGA A [27057] 27022 28 75.9 152 ..A.-......T..C......AG.....T TGCTGACCTGCGATGTCAGGAGCGGTTTGCAATCGCTTTGCCAATTGGCGCTTCCGCCCCTGCCGGTCGGTCACGTGCTTGGAGGAACGGCTCGCTCATAGCCAGAGTGTAAGCGGCCAATGGTGGCTAAAGGGCGCGATATCACAGGTTAG 26842 29 79.3 0 .G........T........C...C.T.T. | G,A [26834,26836] ========== ====== ====== ====== ============================= ======================================================================================================================================================== ================== 11 29 83.1 56 GCGCGCTCCGCGCGAGCGGAGGTGACCCG # Left flank : CAACTCCTCCCGCGCATCGTCACCGACATCCAGCACCTCCTCGACCCCGACACCCACCACGAAGCCCCCGACCCCGAAGAGACCCTCGTCGACCTCTGGGACCCCGTCACCGGCCCCATCCCCGGCGGCACCAACCACGCCACCTGACCTTTTTGCGGGAGGCCCTTGCCATGCCCTCCATGACCGTCATCGCCGCCACCGCCGTCCCCGACCACCTCCGCGGCGCCCTCACCCGCTGGCTCCTCGAAGTCACCCCCGAGCTCTACATCGGCTCCGTCTCAGCCAAAGTCCGCGAAGAACTCTGGGCCGCCGTCTCCGCCTCCACCGCCGCCGGCACCGCCGTCCTGGCCCACCCCGCCGACAACGAACAAGGCTTCACCCTCCGCACCACCGGCACCCAACGCCGCGAACCCCTCGACTTCGACGGCATGACACTCATCGCCTTCCGCAGGGAAAGCCAAGAAGCGGCAAAGCCCTTCTAACGGCCCACGCCAGGAAGA # Right flank : AGCGGCTATTGGGACATGACAAGGGAATCAGTTCAAGTGAACACATACAAAGTGTCGCAAAGAATGACACCTCACAAGCCATCGCGTTCGTCTTCGTGGTTGAGTACGAGGCGCAGGAGGAGCCAGCCCGGGTAGCGCTCGAAGGGCTGGACCGGGTCGGTGAAGATTTCGGGGTCGTCGAAGACAGGCTTGCCGTTGGGGCGGCGAGTGTAGGGGACGTGGCCGTAGTCGACGCCCTCGGTGGCGTCGTAGGCCAGCCAGGCGATGACTTCGCGTTCGTCTTCGCGCAGGGGGTTGTTGGAGACGCCGCGGGCGTTGATGCCGGTGTCGGTGGGGCGCCAGATCTGGGGGACGGCGAAGGCGAAACGGACGGCGTGGATTTCGTGGGCCTTGTCCGCGGCGCGGCGTTCGAAGGCAGCGGCGGTGTCGCGGTCGCGGTGGTAGTCGTAGTCGGAGAAGACGACGAGGCCGTCGCCTTGGAGGGCGACGACCGAGGGGGC # Questionable array : NO Score: 5.60 # Score Detail : 1:0, 2:3, 3:0, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCGCGCTCCGCGCGAGCGGAGGTGACCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCTCCGCGCGAGCGGAGGTGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.10,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [20.0-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 37462-38477 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAATEJ010000022.1 Streptomyces sp. PRB2-1 22, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ========================================= ================== 37462 29 96.6 32 ............................C CGAGTCCCAGTTTTCCGTCAGGAGTGAGAGAC 37523 29 100.0 33 ............................. GCGCATCCCGTTACTGCGACGGGCAGCTGCGGC 37585 29 100.0 32 ............................. GCCACCCACAGCAGCGTCAGGGCGCCGTGCCC 37646 29 100.0 32 ............................. GCCGAGCCTGCCGCGCGCGGCCCCGTCGGACG 37707 29 100.0 32 ............................. CCGGGGTCTTCGGGGGCGCCGGCTTCGGGCTG 37768 29 100.0 32 ............................. TCGGCGGGGTCGTACATGGCGCGCTCGTGGGT 37829 29 100.0 32 ............................. CCCGCATCCTCGCCGAATACGCCCGCGGCGGC 37890 29 100.0 32 ............................. CTCCAGGTCCGCCGCTAACTACCCCAGCACCA 37951 29 100.0 32 ............................. TTCATCCGGCGGCCCGCAGGACGTCGGCCCGC 38012 29 100.0 32 ............................. CATCCGCCACGTCAGGTATTCAAGCGTCGTGG 38073 29 100.0 41 ............................. GAAGGAACCCCGACCCATGGCCACCCACCGCAGCGCTGTGC 38143 29 100.0 32 ............................. CCGTGAGCGCAATCGACGTGGGCAGCCCCACG 38204 29 100.0 32 ............................. CCGTCGCGTCCGCGGGGGTTCGGTGCGTGGCG 38265 29 96.6 32 ..............G.............. TTGTGGGCATGGGCGATCGTGCTGTCCGAGCC 38326 29 96.6 32 ...............A............. CGGCGCGCGTGGGCGCCGCTGGTCCCGCCGGA 38387 29 100.0 32 ............................. GCCATGGGGGTGTCCTGACGGTGGTGGGGTGG 38448 29 93.1 0 ...............A..A.......... | T [38470] ========== ====== ====== ====== ============================= ========================================= ================== 17 29 99.0 33 GTCCTCTCCGCGCGAGCGGAGGTGTCCCG # Left flank : CTCCTGCTGCAGCTTCGCGAACTCCTCCGGCACCTTCACCTGGAACGGCGGAGAGATCTTCCCCAAATCGTGCAGCCCCGCCCAGAAGGCCGCCACCGCCCGCGCGTCCGCCTCACCCAGCCCGAGTGCCGCCGCAATCCGCGAGCGCATCCCCGGCCCCAGGACACCGTCCCAGAGCGCAGCGAACACTGCGGCGGAATCCAGCATGTGACACACCACCGGGTACACCCGCGGCAAGCCCTGCGCCTTGCCCCACATCCGGCAGTCCACACTGTCCCCCGGCGCCGCGCCGGCCACATTCGCTTCCATGGCTCCACTGCTATCACCCCCCTCCGACAATCCAGCCTGACCTGCACAAACATCCCTAAGCCCTTACTCCTCGCCCTATACTCGCCTTCGTGCGCACGGAAGCCTTGCGTTGGTCCGATCACCTGCCGGACCCCGACAACCCCAACCGCAAAGAAGTTGCAAACCCTCTCTAACGCCGCAGGTCAGGAAGA # Right flank : GTCGGCTACCCGGTCAGGCCCGGGCCATTTCGGTCGCGGCGGTGGGTCGCGTCGCGCCGGCGTAGTCGTCGCCGGGGTAGTGGTACGGCTCGATGCGGATGGTTGCGCCGGTGTGCGGGGCGTCGATCATTTGGCCCCCGCCGATGTAGAGGCCGACGTGGTGGATGTGGGTGGGGGTGCCGTAGAAGACGAGGTCGCCCGGGCGCAGGGGCTGTCCCGGGGGGACCAGGGGGCCGCGGTTGTACTGGGCTTGGGCGGTGCGGGGGAGAGGGATGCCGGCGGCGGTGTAGGCGGCTTGGGTGAGGCCGGAGCAGTCGAAGCCGGCGTCGCCGTGGGTGGGGCCGGTGCCGCCCCACTCGTAGGGGAGGCCGAGTTGGCCTTGGGCGTAGTTGATGGCTTCGAGGGCCGCCGGGGCCGGGTCCGTGGTGGCGCCGAGGCTGCCGGGGCTGGCGTAGAGCGCGGCCTGGGTGAGGACCTGGGAGACGTACCACTCGGCGTGG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCTCCGCGCGAGCGGAGGTGTCCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCTCTCCGCGCGAGCGGAGGTGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.70,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [43.3-21.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 105793-104212 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAATEJ010000027.1 Streptomyces sp. PRB2-1 27, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 105792 29 100.0 36 ............................. GAGCAGCGCCGGTTGCCCACCGGTTGCCGGCCCGCG 105727 29 100.0 36 ............................. CAGGTGGCGGACTGCGCACCCACCATATGGGCGGAC 105662 29 100.0 36 ............................. GTGCCGGCCAACGGGGCGCAGTGCTCCAAGAAGGCA 105597 29 100.0 37 ............................. CGCAGCTCGGGGAGCACGTAGAGGTGCGTCTCGTCCG 105531 29 100.0 34 ............................. CCCTCGTCCTGTTCGGGATGGGCAAGGCCGTGGC 105468 29 100.0 35 ............................. GCGTGAGCGGCGCCATCAGCGGCTGCGGGTCCGCG 105404 29 100.0 36 ............................. GCCGTGAGGGTGGATCCGCTGGAGTCCGGGCGGCCG 105339 29 100.0 36 ............................. AACGGGTGAAGATGGCATGGTTGCCCCGGGCTTGGG 105274 29 100.0 37 ............................. ACTGGGTGGTCACCTGTGTGGCCTGGAACAGCGGCGG 105208 29 100.0 36 ............................. ACGTGCATGAGCCAGAGGCCGGAGCCGACTATGGCG 105143 29 100.0 34 ............................. AGCTGCGCGCCATGCGCGACGCCAGCCGCGGCCT 105080 29 100.0 36 ............................. CTGCAGAGTGCGAGCAGTTGGCGATGCGCCAGCACG 105015 29 100.0 35 ............................. TAGGGCACCGCCCTCCGCCGGATCTTCCTGGAGAC 104951 29 100.0 36 ............................. AGGCGGCGGTGTGCTGCTCGATGGCGTCGACGTCGA 104886 29 100.0 36 ............................. ACTCCGGCTACCTGGAGACGCTCAAGAGCCAACGCC 104821 29 100.0 34 ............................. GCGGAGGGCACGTCGAGGACGTCGCGGATGGCGG 104758 29 96.6 36 .......................C..... ATCCAGGCAACGGCGACGGCGGCGACCTGGACCAGC 104693 29 93.1 36 .......................C.T... CGCACTAACGCTATTACCACGGGCGCTACCGCTGAC 104628 29 82.8 36 .....C..T.......A......C....T AAGTGTTGGCCGGGCCGCCACTGGTGACCGTGTGCG 104563 29 82.8 36 .....C........AC..A....C..... GCGACGCTCCCGCCGTGGACGCTACACACCCGGTGC 104498 29 82.8 36 .....C......T.A.A......C..... GACATGGCGATATCTCTCTGATCAGGCAGTGTTGGG 104433 28 86.2 36 A....C.......-.........C..... AAGCCCTCCGCGGGATGTTCGCGTGCGGGTACAGGG 104369 29 82.8 35 .....C.............T...CA.T.. ATGTGGACCTGCGCGACCTGGTCGACGTGGCCTGG 104305 29 89.7 36 .....T........G........C..... TTCGTTGCCGTCATGAACGGCGCCACGAAGCGCAGC 104240 29 79.3 0 .....C........A.......C..GGG. | ========== ====== ====== ====== ============================= ===================================== ================== 25 29 95.0 36 GCCGTGATCAGCCCTGGAGGGCTTGCAAC # Left flank : AGGAACTGGCGACGACCGTCCACCACCGCACCCTGAAGCGCCAGGTCTCCTACGAAGAGCTCATCCACTTGGAGGCCCTCAAGCTCGTCCGCCTCTGCCTGGAGGGCACGCCGTACAAGCCCTTCCGGCCCTGGTGGTGAGCCGGCCGTGTTCGTGATCCTCGTCTACGACACCGCCGTCGAACGCAACCCGAAGGTCCTCAAGACCTGCCGCAAATACCTCCATTGGACCCAGCGCAGCGTCTTCCAGGGCGAGCTCACTGCGGCGCAGTACCGTGCCCTGATGTCGGCCCTCGGCACGGCGATCGACCCTGACTACGACAGCATCGTGACGTACACGGCACGGTCCCCCGAGTTCGTCGAGTCCACGACCCTCGGGGTTCCGCTGGGCGGGCCCGGCGACATCCTCTGACCTGCGGCGATGCATTACCGATGCACTGCTGCAGAATGGCACCTGCGGAGGCGCGCAGAGGGTCTTCTGACCTGCGATTTTACCGTCGG # Right flank : TGAGGTTTCGCTGGAGGGGCCCGATCAGGTCGTCAGTAGCCCGGGTGGGCTGATGACAACCTGATCGGTGCTGGTAGGGGGGGCCGGGTAAGCGTGGCGCCTAGCCAAAGCCCGACGAGGTGCTGTGGGGGCATTCCTGGGATCTGACCTTGCCCAGGCTGCTGCTCGAATCCTCGGCTCAGCGGCCGCGACGGTAGGTGGACATGGGGTCGCCACTTGGCGGCCGGGGTATTGGAGGCGCTGAGTGGGCCTTGTCTTGGTGCGTAAGTGTGCTGCGGGCCATCGCTGCTTGGGCTTGGGGGCTCGGCGCGGGGCGCTGGGTGAGGCGTTGGAGGCGCCAGGTGAGGACTTGGGCAGGGGATCGGGCGTCGTCGAGTGCTCGTTGGTCGGCTGCTTGGCGGAGGAGATGGGCGGGGTCGTGGCCGGCGGTCCGGGCGTCGCTGAGGGCGGTGGCGAGGGCCGGCCAGGTGGGGTCGTTGAGGATCCGGTCGGCGTGGGTG # Questionable array : NO Score: 3.01 # Score Detail : 1:0, 2:0, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCGTGATCAGCCCTGGAGGGCTTGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.10,-7.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [35-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA // Array 2 114324-114948 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAATEJ010000027.1 Streptomyces sp. PRB2-1 27, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 114324 30 100.0 36 .............................. GACTGCGTGTACGCGAAAGCCGCGCCCGAGACCTCC 114390 30 100.0 37 .............................. ATGAGGAGGTCCGCGAATTCACCGCGGAGAAAACCGC 114457 30 100.0 36 .............................. CTGAGTGATTTCCGGGCTGCCCGGGCACGAGGACCG 114523 30 100.0 36 .............................. GCGGGGGGCGGCCATCGTCGTCCACCCCCTACTCGA 114589 30 100.0 36 .............................. ACTGGCTCCGACGACACACCCGACGGCGCCCCCGAA 114655 30 100.0 36 .............................. GGCCGGGCAGCCTGGATCATGGCGCGGGCGACTGCG 114721 30 100.0 38 .............................. CCGCGTGCGGCACCTCCCCACCGAGCCCGGACGACCCA 114789 29 86.7 35 ..CT..-T...................... AGGTCCGGCACGGCCAGGGTGAGGGTCTGCTCACG 114853 29 83.3 35 ...........A...-.A.......AT... GCGCAGGCGGGGTCGACGTCCCCGGCGGTGATCAC C [114856] 114918 30 80.0 0 A...A............TG.........CT | C [114920] ========== ====== ====== ====== ============================== ====================================== ================== 10 30 95.0 36 GGTCGTCATCAGCCCGGGAGGGCTCGCAAC # Left flank : ACTGGGCGAGAACAGGGTCGTGCTCACGAAGCAACCCGTAGACCACGCCACGGGCGGGACGGTGCAGATCGTCCCAGGCAAGGGACGGCGCGTCCGAGACGACATCGACTCTCAAGCGCATGCCCACCTGCCGGAGTTCCGCCGGCCGGGCCGGGTGAGAGGGGTTAAGGCGACATCCATGGCGAGCAACCTAGCATTGAGAATGCCCATAGAAGGCAATTTCATATGAAAGATCATGATAGCTCCCTAGATATGCTATGCCAGCTCAGGATGACCGAAGAGAACCCAGCGGGGCCACCACACGGTCAGCAAGTTAGCTGCCCCCGCTGACAACAGGCCCCGACCGACCATCCCTCCGACCGACACTCACTAGGCTGAGGGACGCGATGCATCAAACCCAAAACGCTCTGACCTGCGGTGTTGCACTACCGCCGAGTCGCTGCAGAATCGACCGGAAAGCGGCCCCGTGGACGGCCGCTGGCCTGGGCCTTTACCCTCGG # Right flank : TGTACGGCCCGTCGGGCCCTCATCGTGCCTGCTCCCGAAGCACTTCGCTGACTTGAGAGGGAGGGTTGCTGTGCGGCCACGCATTCCCGCGGACCCGCTTCTGCTCGTCGTTGAGATATCCGTACTGCCAACCCAGGTGACCGCTTGAGCAGCGGCGTCGGCGAGGAGGAAAGCGCGCAGGCGGCGTGGCTGTCTCTGTACCGCGGCCGAACTGGGCAGATGCCCGAGCCCCCGGCCCGGGGCGCAATCCCCATGGGCCCAATCCACAGAAGCCGCTGTCGCTCCGCGTTGAGTCGGTGCCGAAAACGGGCTTCCCACGGCCGAGGAGCAGGCAACGGTAGCGCTGCGGAGCAGCACCGCAGATGACTCCGGTCTTCCTCCCGCACTCGTGTACCGCCGACCGCGTCCCCTCCATGCTGACTACGCGCCGTCCGGTGATCTCTCGGTGGTCAACCCGGCGGCGACGAGCTCAGCGTGGCAGCATCGGCGGGATCCAACCA # Questionable array : NO Score: 3.01 # Score Detail : 1:0, 2:0, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTCGTCATCAGCCCGGGAGGGCTCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.90,-8.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-17] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [30.0-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA // Array 1 610436-607418 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAATEJ010000001.1 Streptomyces sp. PRB2-1 1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 610435 28 100.0 33 ............................ CGGTCAGCGCCGCCAGCCGGACAGCCTCCGCTT 610374 28 100.0 33 ............................ CCCGGTGGTGTACGCGGACGGCAGGTCCGGGAA 610313 28 100.0 33 ............................ CGCCTACAACGTCATGGGCTGCGCTTCCGCGAT 610252 28 100.0 33 ............................ GCCGACCTCGAGCGCGCCGGCCAGGAGCGGGCA 610191 28 100.0 33 ............................ CGCCCTGGCGGCCGGCAACCCCGGTGCGTTGGG 610130 28 100.0 33 ............................ CGACCACGGCGTCCCTGCGATGGTCGAGCAGGC 610069 28 100.0 33 ............................ CCTCACCTGGCGCGAACGCTGGGCGCTGGTCGT 610008 28 100.0 33 ............................ GCCGCGGCCGGCCATCCCCTTGACGGCCGCGAT 609947 28 100.0 33 ............................ GAGGCCCCCACCCCACCCTTTTCCGGGTGTTGC 609886 28 100.0 33 ............................ TTGGCCATGCGGCACGGCGAGGGACCGATTATC 609825 28 100.0 33 ............................ TTCACGCTCAACGCGAGCACGAACGTCTACAGC 609764 28 100.0 33 ............................ TACTGGGAGCGGCAGACCTACACCGTGAATGCC 609703 28 100.0 33 ............................ CCTTGCGCCCGCAGCTGCGCCGCCGACCGTGAT 609642 28 100.0 33 ............................ TGCTCGACAGCGCGAGACGAGCTGTCATGCCGG 609581 28 100.0 33 ............................ TTCGGGTCGCGCCGGTCGAACATCGCCTGGCGC 609520 28 100.0 33 ............................ GCTGCGCACGCTCCGCCGGGGGAAGCTGCCGCC 609459 28 100.0 33 ............................ GGCCGCATCCGCGCCAACGTCCGGAACGTGCTG 609398 28 100.0 33 ............................ GTGCAGCAGGTCGTCAGCCGTCAGGCCGTCGTC 609337 28 100.0 33 ............................ GCAGGGACGTGCAGCCCGCGGATCTCTGCGAAA 609276 28 100.0 33 ............................ GCGGCCGGCGTGGCTCGCGGCCCTGACGGATCT 609215 28 100.0 33 ............................ TCGGCCCCAGCACACCCAGTGCCTGCGCCACCA 609154 28 100.0 33 ............................ CTACCTGATCTACGACAACGGATCGACCACCAA 609093 28 100.0 33 ............................ TGCCTTCGTCCTGATCGACCCGCCGCGTTCGGA 609032 28 100.0 33 ............................ GGCGATCGCGACGCGCTGCGGGGTCTCGCCGGC 608971 28 100.0 33 ............................ CACCTCGCGGACCGCGGCGTCCACCTCCAGGCG 608910 28 100.0 33 ............................ GCGGGTGGTCTGCGCGGTCGCCCGCGTCATGCT 608849 28 100.0 33 ............................ GCGGCGCCGGTACGGGCGGCGGCGCAGCTGCGG 608788 28 100.0 33 ............................ GTGCACTGTGGCGTTCGGCCGGTACAAGGTGGC 608727 28 100.0 33 ............................ CGGCGACTACGGCGACCCCACGGCCGACGTGCA 608666 28 100.0 33 ............................ TTCGGTCTTGGCTGCCGACATGACACCTACGGG 608605 28 96.4 34 ..........................T. CCGTCGCGGGAGGGACTGCGGCGTACGGCACGCC 608543 28 96.4 33 ...........G................ CTGGACGGACAGGATGTGGTTCCAGGTGATCTC 608482 28 100.0 33 ............................ GGCGGGCGACCCAGTGATCGCCCGGCCACACAA 608421 28 100.0 33 ............................ GCGCACCGGTGGCCGCATGACCACCGCCTACAC 608360 28 100.0 33 ............................ GTCCACCCACAGCACACCGGATGGCCAATGTGT 608299 28 100.0 33 ............................ CGAGCTGCCGACCGCCCCGGTGCCTCTCCGTGT 608238 28 100.0 33 ............................ TGTGCAGCCGCCGGAAATGCTCCATGCTGATGC 608177 28 96.4 33 ...................C........ GCTGATCAACGCTGTGCCGCCAGAACTGCTCGG 608116 28 100.0 33 ............................ GCTCGGATGGCAGACGATGTACGACTACGACGT 608055 28 100.0 33 ............................ CGGCGACTACGGCGACCCCACGGCCGACGTGCA 607994 28 96.4 33 ..................A......... CGCACGCTGAGACTGGGCGAGCGGTGTCGGGTG 607933 28 96.4 33 ..................A......... GTCCACCCACAGCACACCGGATGGCCAATGTGT 607872 28 100.0 33 ............................ GCCGTCCTGCACACCGAGGTCGGCGGGCCGCAG 607811 28 100.0 33 ............................ CGCATCCACGATCTCGTCCTGCTGCTCCGCGGC 607750 28 96.4 33 ...........G................ TCTGGCGACGGGCTATTTCCGCCTCCTTCCGCA 607689 28 96.4 33 ...........G................ CTCGGCCGGCACCCTGTTCAGCACGTCGTTCAT 607628 28 100.0 33 ............................ CGAGTTGCCGACCGCCCCGGTGCCTCTCCGTGT 607567 28 96.4 33 .........A.................. CCGGATCGGCGCTTATCACCCGCCGGAACTCGC 607506 28 96.4 33 ............T............... ACCGGCATCGCACCGATGCGCGACGGGGTGCGC 607445 28 92.9 0 ..............G..A.......... | ========== ====== ====== ====== ============================ ================================== ================== 50 28 99.2 33 GTCGTCCCCGCACGAGCGGGGGTTCTCC # Left flank : CCAGCCCAACCCCGACGCGCGAACCGCCGCCGCCCCCTCCGGCCACATCCGCTGGAACGCCGGAGTCGCCTTCCCGACGTCATGAACCCCACAGAGCCACACAAAGAGGACCCGCCCCCGCCCTTCGCCCCCCGTCACCTCGTCCAGCAACGCCCGGGTCGCCGGGGCCAGGAACCCGTCCCACATCCACCCCGCCACCGCCGCCGTGTCCAGCAGATGCTGCAGCAGCAGATTCTTACGCCCCCCGGCCCGCCCGGCCGACTTCCCCCACAACACGCCCGCCGCGCGTAACGCATCCCCATCCGCACCGAGACGGATCCCGCCCCCTCCGGCCACGCAACTCTCCTCGCTCGTAAGCTGTTCGCAGCCTAGAGCTGACCACTGACAACCGGAGGACGATGATCAACGCTTCGTTCGCCCTCCGGGCGCGGGCCGTGCGGGCCGGCGGGCAACTCAACGAAATTCGGGCTCCGGCCCGATAGAATCCCTGCTCAGCAAGC # Right flank : GGGGTGGGCGTGGACGGTTTCGAACCGCCGACATCCGCCTTGTAAGGGCGGCGCTCTTTCTCCTCTGACCTGCGAAGTGTCGCTAGAAGAAGATCATCTGGGAGATTTTCGGGAGATCAACTTTCCTCCCAGACCCTCGACCACCCGAGCGCCTTCATCCCGCGCTCGTAGATCCCCTGGAGCCCTTCCAGCCTAGCGCGCCGCATCTCCGGCGTGGGGTGCTGGTACACCGCCTTGATACCCGGCCGCTTGTGGCCGGCCTGCTCGAACGCGAGCGCCGGCTTCACGCCGATCTCATCCTGGTAGGTGTCGTGGGTGTGCCGCAGAGCGCGCATGGTCAGGCCCGGCATGATCGGCGCCCAGGCGGTGCGAGGCGCGTGCCCCTTCGTCGCCACCAGGGCCTCCCTGCCGTCGGCGGCCGGCCGGACCACCTGCCGCCCGAAGTTGCCGCGCCGCCAGTGGCCGCCGGCCCGGGTGCAGAAGAGGAACTCATGCCGCCA # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCACGAGCGGGGGTTCTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-12.90,-13.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA // Array 2 623893-620630 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAATEJ010000001.1 Streptomyces sp. PRB2-1 1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 623892 28 100.0 33 ............................ CCGGGCGGCCAGCTGCGCGCCGAGCGCTTCGGG 623831 28 100.0 33 ............................ CAGATCGTGAGTACGACGGAGTACGCCTCCGTC 623770 28 100.0 33 ............................ TCGGACCTGTCGTCTCCGCCATTACGCCCTCGT 623709 28 100.0 33 ............................ TGCGCACGTCCATCGACATGGGGCCGGGCGCGT 623648 28 100.0 33 ............................ CTTCATCTTCGACGGCGGGACCGTCCCGGACCA 623587 28 100.0 33 ............................ TGCTGCAGGTCCTGTTGGCGCAGGAGGCTTTCG 623526 28 100.0 33 ............................ TTCCCACGTCAGAACACTTTTGAACGTCGTTCT 623465 28 100.0 33 ............................ TCCGTGGTCAGGCACTGGCCTGCCCCCCTCGCT 623404 28 100.0 33 ............................ CCCGGCTGACGAGACCTTCGGTCTCAGCCGGGT 623343 28 100.0 33 ............................ GCCCGAACGACCCGGCGACGGACACCTGCGGGG 623282 28 100.0 33 ............................ CATGGTGCGGGCCTGGTCGATGACGACTTCCTG 623221 28 100.0 33 ............................ CTGCACGAAACTGATCCTCGGCGGCCTGTCGAA 623160 28 100.0 33 ............................ CAGCGCGCGGACGCCGGTGGTGATCGAGCGTCC 623099 28 100.0 33 ............................ GTGGAAGACCGTCGTCAACGGTCCCAACAGCTC 623038 28 100.0 33 ............................ GACGAACGGCTTCTTGGCCGACCTCTTCATCAG 622977 28 100.0 33 ............................ CCGCCTCGACAACTTCGCCCTCGTCTCCGCCGC 622916 28 100.0 33 ............................ CGGCTCCAGCAGCACCCGGGTACGGCGCCGCCA 622855 28 100.0 33 ............................ CTGCTGCGGACCCTCCAGGACATCCGGGCCGCG 622794 28 100.0 33 ............................ CCGCCGGGGCGGTGGCCGCCGTGGCTGAGATCC 622733 28 100.0 33 ............................ GGCCCGCGCGACGGTAGACCTCATCCATCAGAA 622672 28 100.0 33 ............................ TCCGCGCGGCGTTCGGCCCGGCCCTTGTTACGG 622611 28 92.9 33 ...........GT............... GATCTCCCCGGAGATACAGCGCGGCGCCATCGA 622550 28 96.4 33 ...........G................ GTACGTCGGCCCGACTGCACACAGCCTCGGCGT GAC [622529] 622486 28 96.4 33 ...........G................ CTCCGGCGAGAGTGTCGGCCTGCTCCCACAGGG 622425 28 96.4 33 ...........G................ GGTGCTGGAGACGATGCTGCACAAGGCGGCGCA 622364 28 92.9 33 ......T....G................ GCGGGTCCAGCCGAGCCTCGCGCACGTCGTCGA 622303 28 92.9 33 ...........G.......A........ CGCTCTCGTGCACGCCCGGTCACCGCAAGTCGG 622242 28 100.0 33 ............................ CTGGCCCGGCTCTGCACCCGGCCCGACTCCCGG 622181 28 100.0 33 ............................ GTCCTGCGCGAACAGCCGCCCGCCGACGCCTGA 622120 28 100.0 33 ............................ CTGATCGACCCGGCCCCATCCGGCGTTGTATCC 622059 28 100.0 33 ............................ CCCAGCCCCGGAGCCCGTGCAGCTCATCAACAC 621998 28 100.0 33 ............................ GGCCGCCTCGACTGCCGCCCCCGCCTACCTCTC 621937 28 100.0 33 ............................ GATCGCCGAGACGCTCCAGTCGGATTGGGAGAA 621876 28 100.0 33 ............................ CGCCCAGGACGTCGCCACCCAGACCAACTCGCA 621815 28 100.0 33 ............................ CTGCGCGGTGGAGCCGCCCTTGACTACGTATGC 621754 28 100.0 33 ............................ GGGGTTCGGCTGCGCCCATAGGGCCAGGGCGGC 621693 28 100.0 33 ............................ CAGCGGGTCGACCTTCGCGCCCAGCGCCCGCTT 621632 28 100.0 33 ............................ CCCCCGACGCGACGGGCGTTCTCGCCTCGGGGG 621571 28 100.0 33 ............................ ACGCGCAGCTCACGCCGTAGGCCACATCTGGGG 621510 28 96.4 33 ...........G................ CGACTGATCCAGCAGCCTCCGGCGACGCCGAGC 621449 28 96.4 33 ..........A................. GCAGGGGAAGCGCTGCCGCGCTCCATCGGATCG 621388 28 100.0 33 ............................ CCGAGCCGGCCAGGACGAGGACCAGCACGAGGG 621327 28 100.0 33 ............................ GGTCGTATCCGGCGTGTGTGAGCAGGGTGCGTG 621266 28 96.4 33 A........................... CGGGGCTGCGATCACATGGGACACCGTCCAGGC 621205 28 96.4 33 .............A.............. GGTGACGTCGTCGCCGCGCGAGTCGAGGACGGC 621144 28 96.4 33 .............A.............. CAGGGGCGCGCGGATTTCTTCCTGAGCGGGAAG 621083 28 100.0 33 ............................ TTCACGCCCTCCCGCGACAGGTACGGCTCGCCC 621022 28 100.0 33 ............................ CAGCTGCTGCCGGGCCAGGATCAGCGAGAAGAT 620961 28 96.4 33 ...........G................ CCTGTCCGCCCGCCTGATCGAACTCATGCGGTG 620900 28 96.4 33 ...........G................ CTGGTGAGTTGGGCATGCTCAACCGGCGCTGCA 620839 28 96.4 33 .......................C.... TCCTCTACCGGGCGGTGGCCGCTATGAGCGCCG 620778 28 89.3 31 .C......T..G................ CTCCCCTTCCCCCCGGGGGGGTGGGGGAGGG 620719 28 96.4 33 ...........G................ GACGCCCCTGCGGGAGTGCGCTCCGGCAGCGCC 620658 28 92.9 0 ...........G..........C..... | T [620632] ========== ====== ====== ====== ============================ ================================= ================== 54 28 98.5 33 GTCGTCCCCGCACGAGCGGGGGTTCTCC # Left flank : ACGCCGCAAACCCCCGCGGACTCCCCCGAACCTCCGTACGAACAGGGCTCCCCCGTCTGCGAGCCGGCCAACGACCACGCCGCAGCCACCCACTCACGCCCCACCCCCACGATCTGGTCGAACATGCCCGCCGCCGACAGACCACCCTCACCCGCACCGCCACCGCTACACAGCCGCCCACCCCCCGTACGCTCCAGCTCAACGGCGAACAGCGGCATCCGCGCCCAGCACCAAGCCACTGCCTGCCGTTGACGCCACCAACGGGGCCTAATGCCGCAGCTCATCGGCAACTACCCCAGTCCGCGCCACCCTCCGCCCACGAGACCACAACCACGCCCCGCCTCCCCCATAAACTGTCCTCAACCTACAAAGACGGCCCCCAAACACCCGGCGGTAAAGTGATCACCCCTTGGTCCACCAGACCAACACACCTCGGGCCCGGCCACGAACGACTAAAGAAAAACCGACCCTCCGGCCGATAGAATCCCAGCTCAGCAAGT # Right flank : GCCCCGGGGCCGGGGCGATTGGTTGGGGTCGGCATGCGAAGGGACCGTGCGGTGCCGGTCTGGCTCTATGTCGGACTGAGCCGGACCGGCGCGTCGGGGGTCACCCCGCGGGGGGCGGCGGGGAGGGGCGGCGGGCGCGGGCGGAGAGGAGGAGGCCGTCGAAGTCGGTGGGGGTCCAGCGGTCGCGGCCGGCGGTGCGGGTGGCCCAGCCTTGTTCGTTGGGGGCGGGTTCGACGAGGACTGCCTGGCCGTCGCCGATGCGAGCGGCGAGGACTTCCCAGAGGCGGTCGCGGACGCGGCGGTTGGGGTTGCCGACGAAGACGCCCGCGTTGACTTCGACCATCCAGCGGGTGAGGTGGCCGCGCAGGCCCTCGGGGGCGGCGATCAGGACGATGACGGTCATGGGTTCTCGCTGCCGCTCGCAGGGGCGGGGGGTTCGAGTTCGGGGCCGATGACGGCGATGTGCTGCTCGCCGAGGTCGGCCTCGCGGGACCAGTTGA # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCACGAGCGGGGGTTCTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-12.90,-13.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [23.3-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.68 Confidence: LOW] # Array family : NA //