Array 1 190453-189550 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP021260.1 Legionella pneumophila strain NY24 (D-7706) chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 190452 37 100.0 36 ..................................... CTGCGGAGCTTTGCAATTGAACGTCTTGTTCAAACA 190379 37 100.0 36 ..................................... TCTGCAGCTGGTTATGCCGTAACCGCAACGACTGCT 190306 37 100.0 32 ..................................... TACAATCATTGAATGTTTGACCAGTCAAAATG 190237 37 100.0 35 ..................................... CCCAAATGGTGGTTGTATTATGTGGACGTGCCACG 190165 37 100.0 39 ..................................... TGGTTATATCCCTTAACGTAAAAACGCCTGTAAACGATG 190089 37 100.0 35 ..................................... AACAAGATCCGCAACCTCCTCTAGTCTAATTATAG 190017 37 100.0 33 ..................................... GTATCAACAGGAGATTCACGACGAATCCGTAAA 189947 37 100.0 33 ..................................... GAATATTTAATATCCAGCCGGTATAGTACAATG 189877 37 100.0 37 ..................................... GTTCTTGTTTGCCATAATTTTCACTGCCCCTCCCTGA 189803 37 100.0 35 ..................................... TCATTATAAGGCAATGCGTCCGTAGATATGCGATA 189731 37 100.0 36 ..................................... TTTTACCTGTTTTATATACATAATCGCTTTCTACTT 189658 37 100.0 35 ..................................... GTCGCATCGTTTTCATGGTCGTAGCCTGACTTCTT 189586 37 81.1 0 ....A......C...........TT...T.A.....T | ========== ====== ====== ====== ===================================== ======================================= ================== 13 37 98.5 35 CCAATAATCCCTCATCTAAAAATCCAACCACTGAAAC # Left flank : TCTTTTGCATCAAAAATTAGTTTAGGTCAAAAGATGCAACTGACCGCATATGGAATGCTTTCTGAATTGATTTTTGAAAAATCATGTACCCGAGGCTATATTATTACTGGTGAAAAAGCCAAAGCCAAATTAATAAAAATTGACGAAAAATCAAAGTTCAAAGTGCTTGAAATTTATGCTAAAATAAAGAAGATTTTTGACACAGAAACATTACCATACAGCACTGCTAATGGACTTCAATGCATTCAGTGTGAGTTTCTAAATCACTGTAACGATAGATTTTAAAATCGTTATATGCTCGCTATTAATACGAGCATAGAAAAACGATTCAATCTTTAATTTTGTTGATTTCAGGGTATCGAAATTTAGATGATTTCTAATTCAAGTATTGCCTTTTTTTTCGAAAAATCAAGTCTAAATAATGCAATTTGCTATTTTTCGAAGAAAACCACTTTTAATTCCTCGTGTTTCTTTAAAATAAACAAAGAGTTAAAATTGCT # Right flank : ACTCCATACTTTATTCTCTGTATACTATTATAGTAAAACTCCATGGAGTTATTATTTTATATAATTAAACATGTCGTAACTCCATGAATGTGACACTTTCATGGAGTTACGACAGCTGTTATGTTTGCTTGTTTTTCATCTTATTTGCTTAATAATTAACTTGATAATTATTAAGTGCTTTTATTTTACTCTGTTGCTTTTTCTGACAATACCTGTCTTTACAGATTATCTTTGTAACAAATTTTCTTAATTTAATTTTCAAAACCATGCCCAACAATGGATTGTCTTTTGTTTTGTACATCTCAACTGAATATAATACTAGTGAATTTATTTTATTAGATAATTATTTCAGTAAGTTCTAATATTCAGGACTAATTTCCCAAGAATATTAACCTCAGCAATATCACTCACTTTAATATCTGGCCAATTATCATTAAGCGTTAAAAGCTCGAATTGTGAGGATGTATAGGACAATTTTTTATATACACAGATGATTGCCT # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCAATAATCCCTCATCTAAAAATCCAACCACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 2 225676-224773 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP021260.1 Legionella pneumophila strain NY24 (D-7706) chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 225675 37 100.0 36 ..................................... CTGCGGAGCTTTGCAATTGAACGTCTTGTTCAAACA 225602 37 100.0 36 ..................................... TCTGCAGCTGGTTATGCCGTAACCGCAACGACTGCT 225529 37 100.0 32 ..................................... TACAATCATTGAATGTTTGACCAGTCAAAATG 225460 37 100.0 35 ..................................... CCCAAATGGTGGTTGTATTATGTGGACGTGCCACG 225388 37 100.0 39 ..................................... TGGTTATATCCCTTAACGTAAAAACGCCTGTAAACGATG 225312 37 100.0 35 ..................................... AACAAGATCCGCAACCTCCTCTAGTCTAATTATAG 225240 37 100.0 33 ..................................... GTATCAACAGGAGATTCACGACGAATCCGTAAA 225170 37 100.0 33 ..................................... GAATATTTAATATCCAGCCGGTATAGTACAATG 225100 37 100.0 37 ..................................... GTTCTTGTTTGCCATAATTTTCACTGCCCCTCCCTGA 225026 37 100.0 35 ..................................... TCATTATAAGGCAATGCGTCCGTAGATATGCGATA 224954 37 100.0 36 ..................................... TTTTACCTGTTTTATATACATAATCGCTTTCTACTT 224881 37 100.0 35 ..................................... GTCGCATCGTTTTCATGGTCGTAGCCTGACTTCTT 224809 37 81.1 0 ....A......C...........TT...T.A.....T | ========== ====== ====== ====== ===================================== ======================================= ================== 13 37 98.5 35 CCAATAATCCCTCATCTAAAAATCCAACCACTGAAAC # Left flank : TCTTTTGCATCAAAAATTAGTTTAGGTCAAAAGATGCAACTGACCGCATATGGAATGCTTTCTGAATTGATTTTTGAAAAATCATGTACCCGAGGCTATATTATTACTGGTGAAAAAGCCAAAGCCAAATTAATAAAAATTGACGAAAAATCAAAGTTCAAAGTGCTTGAAATTTATGCTAAAATAAAGAAGATTTTTGACACAGAAACATTACCATACAGCACTGCTAATGGACTTCAATGCATTCAGTGTGAGTTTCTAAATCACTGTAACGATAGATTTTAAAATCGTTATATGCTCGCTATTAATACGAGCATAGAAAAACGATTCAATCTTTAATTTTGTTGATTTCAGGGTATCGAAATTTAGATGATTTCTAATTCAAGTATTGCCTTTTTTTTCGAAAAATCAAGTCTAAATAATGCAATTTGCTATTTTTCGAAGAAAACCACTTTTAATTCCTCGTGTTTCTTTAAAATAAACAAAGAGTTAAAATTGCT # Right flank : ACTCCATACTTTATTCTCTGTATACTATTATAGTAAAACTCCATGGAGTTATTATTTTATATAATTAAACATGTCGTAACTCCATGAATGTGACACTTTCATGGAGTTACGACAGCTGTTATGTTTGCTTGTTTTTCATCTTATTTGCTTAATAATTAACTTGATAATTATTAAGTGCTTTTATTTTACTCTGTTGCTTTTTCTGACAATACCTGTCTTTACAGATTATCTTTGTAACAAATTTTCTTAATTTAATTTTCAAAACCATGCCCAACAATGGATTGTCTTTTGTTTTGTACATCTCAACTGAATATAATACTAGTGAATTTATTTTATTAGATAATTATTTCAGTAAGTTCTAATATTCAGGACTAATTTCCCAAGAATATTAACCTCAGCAATATCACTCACTTTAATATCTGGCCAATTATCATTAAGCGTTAAAAGCTCGAATTGTGAGGATGTATAGGACAATTTTTTATATACACAGATGATTGCCT # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCAATAATCCCTCATCTAAAAATCCAACCACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //