Array 1 65855-65233 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAARLZ010000014.1 Luteibacter anthropi strain CCUG 25036 NODE_14_length_129095_cov_45.049138, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ==================================== ================== 65854 31 100.0 35 ............................... GTAGTCCAGGGTAGCTACCATGTCTTCGCCAACGC 65788 31 100.0 36 ............................... GCGATGGTCCATCGTGTAACCCAGTCCGCGCACGAG 65721 31 100.0 35 ............................... GTGAAGGTCTACGAGAAGGCCATGCATCGGCGGCG 65655 31 100.0 34 ............................... AAGGGTTGAAGCGTTTAGACGCTGCCTACGAGAA 65590 31 100.0 35 ............................... GTCTGCGGGGCACCAAGGGACGAGCGGAGGAACGC 65524 31 100.0 35 ............................... GTCACGGACCTTGCCGTTGTACGCAACGCCGTGGG 65458 31 96.8 34 ........G...................... CCGAAGCCCGTAGCGGCACATCCCATCACGGAGT 65393 31 100.0 35 ............................... GTTCGGGGTTACAACGGAGATTTTCTGCATGGCCT 65327 31 96.8 34 .....A......................... TCGACCACCGGGCTGGTGTCCTGCGGCGTGACGG 65262 30 80.6 0 A...A....A...C...A....-........ | ========== ====== ====== ====== =============================== ==================================== ================== 10 31 97.4 35 GTCACGCCCTCGCGGGCGTGTGGATTGAAAC # Left flank : TCCTTTTTTATGGAAATGAGGGAGTGGGCTATCCATGATGATGCTGGTCAGCTACGACGTTCGAACCTCTACGGAGGATGGCCCGGGTCGCCTCCGCAGGGTTGCCAAGGCATGCCTCGATTTTGGACAGCGGGTTCAGTACTCCGTATTCGAGATTGAGGTGGAGCCGGCGCAGTGGGTCGCATTGAGGAAGCGCCTGTGCGACATCATTGATCCGGAGGTGGATAGTCTGCGGTTTTATCATCTTGGATCCCGCTGGCAAGATAAGGTGGAGCATATCGGTGCAAAGCCGGTACTGGACCTCAAGGGGCCGTTGATCTTCTAGCGCGAACCGGTAGCGTCCTGGATAATCCCGGGAGGTTCGCGAATTTTTATCTTGTTGATTTTACCGGTTATCTGTTCGTCTCAAGGGCGCGGTGATCTGACCCGCGCCTATTCTTCGTGAGGTTTGCGAATTTTCGGGATTTTTTCCTTTGTTGGCATTGGCTTATGCTGGCGGA # Right flank : CAGGACGCTCCCGCGGTTATACCGGATGTCCGTGGCTATACCCTTGTAGGAATCAGAGAGATGATGGTGTGTCAAAAGTACTTACGCCTCACACGCTTCTGATGTTTATGTAGCGAAACTTGAGCGATATCCGCCGGCCTCAGCCTTCGGTCGCCTCGATATTGTTGAGGGCCTTATGGCGGCATAGTTAATTCTTCGCGACAACCGGTCGCGCGCAGGCGCGCTCCTACGGGGGAGGTGGGGTGGTTTGGCACTTGACGGTGGAATGGGCGTGGCCGGTAGCATCGGGGATGATTTTCGGGGGAGGGTGACGATGAAGCCTTGTTCGTTGCGGCTGGCCGTGGTGCTGGCGGTGCTGTTGATGCCTGCGGTGCGCGCGGCGGATGTGTCGGTGGAGCGCACGCAGCGTATGGCTCGGGCTGTGACTATCGTTCGCGATGACTGGGGTATTGCGCATGTCCATGGCACGACGGATGCGCAGGCGGTTTTCGGTGCGGCCT # Questionable array : NO Score: 9.13 # Score Detail : 1:0, 2:3, 3:3, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACGCCCTCGCGGGCGTGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCTCACGGGCGCGTGGATTGAAAC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.80,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 74451-76297 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAARLZ010000014.1 Luteibacter anthropi strain CCUG 25036 NODE_14_length_129095_cov_45.049138, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ==================================== ================== 74451 31 100.0 35 ............................... ATGGCTGCAAGGGTGAGTTCGGCTGCGTCCATCGT 74517 31 100.0 33 ............................... AAGGCAGTCGCCATGAATCGCGCGGCCATGCGG 74581 31 100.0 34 ............................... ACGGATCCGCACGCGCGGCAGCGGAACGCCAGAG 74646 31 100.0 34 ............................... TTTGACCGTCGATAACTCAATTCAACTATCAATG 74711 31 100.0 36 ............................... TATGGCGGGTACCATGACCTGCTGAAATCGGTTTAG 74778 31 100.0 33 ............................... GTGTCGGTGGTGACGGGTGTCTGGTTTGCCCGC 74842 31 100.0 35 ............................... CGGTGAACGATGAGGCTGACGAGCTCCCCAAGCGT 74908 31 100.0 34 ............................... CCATGGCGGATACGTACTATTTTCGAGTCCGTAC 74973 31 100.0 33 ............................... GAGGCGTTCCGCGCAGTATTGACCACTGGCCTG 75037 31 100.0 35 ............................... TCGTTGGCCAGCTTCGCGAAGGCCGCGACGCTCTC 75103 31 100.0 34 ............................... GATCATGTTCGGCTCCTAAAGCCAGCTGGGCGGC 75168 31 100.0 35 ............................... GTGGTGGCCTATGAGTTGCGCTTGCAGCTTCCGGA 75234 31 100.0 34 ............................... TATTCGGCGATACAGCGACAACGCGCCATCCGTA 75299 31 100.0 35 ............................... TTCAACGACATCACGGGCGCGGTGCTGGTCTTGTC 75365 31 100.0 35 ............................... GATCAGGTTCGCAGCAAGAAGGGCCGTTGTAGCCT 75431 31 100.0 34 ............................... AGCCGCATATCGTCGATCGTCACCACAAGCCGCG 75496 31 100.0 33 ............................... TGGTCAACCTCCTCATCCTTGCCGACGACCTTC 75560 31 100.0 34 ............................... ACGGCCACTTGGCGGCTGTTTGCGATCTGCTTGA 75625 31 100.0 35 ............................... GGGACGACCAGGGGCATCATGGAACTGGCCGAAAC 75691 31 100.0 36 ............................... CATCTCCACCCCTCGAATATCAACTACCAATAGCCG 75758 31 100.0 35 ............................... TTGTTCTCAAGGTAGATGAACATACCGACCATGTC 75824 31 96.8 33 .........................C..... GCCCTGCGCTCCAGCGACCCGCGACAGGCTGGG 75888 31 100.0 34 ............................... ACGCCGACTTGCTCTCGACCTCGATCCGCACACC 75953 31 96.8 35 ...A........................... GGCTGGGTGCGAAAGGTAAGTGGTCTCCGCCGCTT 76019 31 96.8 32 ..........A.................... CACCCCCGATGTAGTGAGCGGGGATGTGGTGG 76082 31 96.8 34 .G............................. TCATACCCACCGCCTGACCCTCGGGGTCCGGGGA 76147 31 100.0 35 ............................... CTGACCCGCTATCGCACCTACGCCACCCGTCACAT 76213 31 93.5 23 ......................A..C..... CGGATCACCGCATCGCTGAAGAA Deletion [76267] 76267 31 71.0 0 A..A..T.T...T..C.....T.TC...... | ========== ====== ====== ====== =============================== ==================================== ================== 29 31 98.3 34 GTCGCACCCTCGCGGGTGCGTGGATTGAAAC # Left flank : GCGCCGAAAGCCGCCCCGAAATCCCCGGCCAAATCGCCAACGTTGCGATGGTGCACCCGTAGCAGCTGCCAATCCGATCGGTCTGTTCGCGATGTTGAATGTGCGTAGAACTCCATCCCTGCTCCCTGTTCATGATGGCTACCGAACTGCTGTGTCCTTAAGGTACACACACTCGTCTCATGGACTGCGACAGATGTTGTTGACTCTTGTCGCCTGTGCGCGGGGGACATCCTAATCAACAGGCATGACGGTATGGAATGGAAGGATTCTCAAAAATGGGGTTGACGTTATTCCTTGTAAGTGACAGGCAAGGTCTATCGAGCGCGAACCGAAAGCGTCCGGGGAAATCCCAGGAGGTTCGCGATTAGCTCAAGTTTATGATTTTTCTTATGTTTACCGATCCGGAGGTTGGGATGGATCGGCTTCCCGGTAGTTCAAAGACCAGGTTCGCGGAATTGATGGTATTTGGCCTTTGGAATTCGGCGTTTATGATGAGGGGA # Right flank : CAGCTTGATGCCAATGCCATCCATATAAGCTTCAAGTCTCATAACCATATGTATGAAGTCACAGCCGGATACCTCTCTACCATCCGTCCACTATTCCATTGCATAAGTAATCTATGCGCCTTACGTACGACACAACCGGTCGCGCGCAAGGCGCGCTCCTACAGAGTTAGCGGGACATTAGCCAGAGCAAGGTTGCGCCCAGCGTCGAGCCCAGCAGGCCTGTGCTGGAGAGGTCCAGCATGTCAGCGGGCCTGGGTCCCTGCCTTCGCAGGGACGACGTGGTGGTCTGCAACGATGCGTCTTGTCGCAATGACTAAATGAACGAGTACTATCACAACAGCGGCCATTGATGATCACGGAAAGTGCCGCACGTGCTGCACTACCCTTTGCAAAGCCAACCTATCCGGACATCACCACATGATCGATGCAAAGTGGCGAACGGCCACGCTTTCATTCCTCACATTTATCGCGGCATCCCCGGACATCGGCATGGCGCCGCC # Questionable array : NO Score: 9.15 # Score Detail : 1:0, 2:3, 3:3, 4:0.91, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCTCGCGGGTGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCCTCACGGGTGCGTGGATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,1.01 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //