Array 1 174605-174419 **** Predicted by CRISPRDetect 2.4 *** >NZ_LIYL01000059.1 Lysinibacillus sp. FJAT-14222 scaffold3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================================== ================== 174604 36 97.2 54 ....C............................... ATACGTAGGGACGATTAAAATCGCGGTACCACCCTAGTTATGAAAAATACAACA 174514 36 100.0 24 .................................... TAGGACGATATANNNNNNNNNNNN 174454 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ====================================================== ================== 3 36 99.1 40 AGAGTAAGACCTAAAGAAAAAACGTCCCTACGTAAA # Left flank : CATCCTCCTACAACACTGTAGAATGAAAGCAATATGAAACATGTGACAATCCCTAATTTTCCGACCCACGGCCATAGCGTCTTTGGAGCAATATTTCTATATGCTTCAACAGCCTCTTTTTGTGTACTTCTTCCGACTACAAATTCTGCTAATAATAATGGTAAACCGATTAATAATGTAAAACCGATGAAAATAAGGAAGAACGCACCGCCACCTCCAATACCGGCCATATACGGGAACTTCCAAATCGCGCCAAGACCTATTGCTGAACCTGCTGCAGCTAAAATAAAACCTAATTTTGATGTCCATTGCTGTGACTCCATCTCTTTATCTCCTCTCTTCTTCTATTTCTTTGTTTATTACAATTCGGTCTTTATTCATATTGGTCTATCGTGACTCCTTTCTCATACAATTGCTTCCTTTCATATAAAAATCGCCCCTACGAAAACGTAGGGACGATAAAAATATCGCGGTACCACCCTAGTTATGAAGATACAACA # Right flank : TACGTAGGGACGATATATATCGCGGTACCACCCTAGTTGTGAATAAAATTCTTCACCACTTTATTTGATAACGGTATTCACTACCGTCTTCCACTTCCTCACAACGTGTGATTTATGAAAGATGCTCCAGGTCGAAATTCATGATAATCTATATACTGATTCGCACCAACCACCAGCTCTCTGAAATAGGGAGATTTTCACTACTTTATCCTATCATTGCCCAAATATTAATTTCCCGAATTGATACTATCATTTTTATCACACATTAAATACTTGCGTCAATTATTTTTTTGTTTTATCCGCTTATTTTCCGCTATAAAAATTCGAAATATGACTTTTGAATGGATACCTTTGCATTACTTATGGTTTATATTATATTAAATGTGACAGGTTTATAGTTTTTTAGTTCAACTATTTGATCATTAATCCTTTAAACCGACAAAGGTATTTTATCAGGAAAATCAATTGGAAATATAAGGCAAACCATACTACCACTTAAT # Questionable array : NO Score: 4.29 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:-1.00, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGAGTAAGACCTAAAGAAAAAACGTCCCTACGTAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: R [matched AGAGTAAGACCTAAAGAAAAAACGTCCCTACGTAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.80,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.5 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 215427-215931 **** Predicted by CRISPRDetect 2.4 *** >NZ_LIYL01000059.1 Lysinibacillus sp. FJAT-14222 scaffold3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 215427 33 100.0 34 ................................. TATTCCGTTCTCCACAACTTCTAGAGGAAATTCT 215494 33 100.0 34 ................................. AAAATGGAACAATATGAGAGTCAAAGTAATACAA 215561 33 100.0 34 ................................. CTGGTTGTAAGCATCTAGTGAAATAATACCTAAC 215628 33 100.0 35 ................................. AACTTGTTTAGTGGTTGTTATTGATAGAACATTTC 215696 33 100.0 34 ................................. AATCCGTTGTGGAATGTCGATGCTAAAACTGATG 215763 33 100.0 36 ................................. TGGAGTCACTCGTAAGAAGTGAAGTTGTGGAAAAGC 215832 33 87.9 34 ....G............AG......T....... TTGGCATCAAGGGTATTACAGTGATATGTATGAT 215899 32 81.8 0 ......G...A...A....-...C........A | T [215928] ========== ====== ====== ====== ================================= ==================================== ================== 8 33 96.2 35 GTCTCTTCTCGTATGAGGAGAGTGGATTGAAAT # Left flank : CTTCAGACGACACAAAAGAAATAAAATCAGCGAAAGCTACACCAAGAGAAGAACAACAATCAGCGACTGCAACTGACGACGCAACATCAAGCTCAAGCACTGTATGGATTGTAGCAATTATCGCATTACTAGCTGTCATCCTCGGCTTCGTATTTATGAAACGAAAAAAATAATGAAAATCGAAATAAACCAGCAATTGACGAGAAAATCTTGTCATTGCTGGTTTTTTTTGTGGCTTAGAAAATAGGATTAAATCAAGGGAATATATTATACTGATTAAATGTAAAATAATAGTTTTAATTTAGGTTTATTATACAATGTTTTGTTATAATTAGGTAAGGCGCGAATAGCAAGCGAACATAACTTTATAGAGAGATTCGCACCGAAATTCATTTAAATATGATAGCGTTAATTTTGTCGTTTTATTCCTTAAAACCTATGCGCATTAGATATTATGATATAAAAATGATGTATTTGTTATGGATTTATTAAGTTTTGCT # Right flank : AAATAAATAAAATAAGAAGGTGAATATAAATGTTGGTAAAAGACTTTATTGCGCATATTCGAACTAGTGACGGAGCAGAGCAATTGTTAGTAGATCATTTAAAAGAGGTGCAATATATTGCTGAAGAAATCGGACAGAAAATAGGGCTTAAGCATGTAACAGGACTTGCAGGTATGTTGCATGATATGGGCAAATTTAGTGATGCGTTTCAGGAATATATTCGCGATGCGGTGGCAAATCCTTCTGATCCACCAAAACGTGGGAGTGTTGATCACTCGACTGCTGGTGGCAAATTTTTGATGGAGCATTTTCAAAGAGTTAATCCAGTTTCTCCTTTTTTAGTGGAGTGTGTGGCAAATGCTATTTTTTCACATCATGGACAGTTACTAGATATGATAGATATGGATGGACAGTCGCCTTTTGTGAATCGGCTGACATCTGAGAAGAATATTGATTTTTCACTTGTAAAGCAACGTTTTTTACAGCATATGTATGATTTA # Questionable array : NO Score: 9.07 # Score Detail : 1:0, 2:3, 3:3, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCTTCTCGTATGAGGAGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.58%AT] # Reference repeat match prediction: F [matched GTCTCTTCTCGTATGAGGAGAGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.00,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 224384-230934 **** Predicted by CRISPRDetect 2.4 *** >NZ_LIYL01000059.1 Lysinibacillus sp. FJAT-14222 scaffold3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ================================================================ ================== 224384 33 100.0 38 ................................. GTTCGTCGTCTCGTAAGTTCATCAACGACGTTAACACA 224455 33 100.0 35 ................................. GTTCAGTTATTTGTTAAATAGAATGATAAACTTTG 224523 33 100.0 36 ................................. CAAAATACGTTTGTACATTGGAGGCGACAGGATGAT 224592 33 100.0 33 ................................. CGCATTTATCAGTGGATGGCTTTTATTATACGC 224658 33 100.0 35 ................................. GATTTTATCAATGCATTGGAAGTGAGTCGGAACGA 224726 33 100.0 35 ................................. CTAATTTAAGACTTGCTGCAAACAGTGGAATAAAC 224794 33 100.0 34 ................................. TCCTAAACCATCGATAAAACTCGTGATTAATATA 224861 33 100.0 34 ................................. GCATCTTTTAAAGAGTAGTTTAACTTTCCATTTA 224928 33 100.0 34 ................................. ATCCTCCAGGTATAACACTAGCTTGCGGTAAATC 224995 33 100.0 33 ................................. TACTTTGTCAATGTCTTTTAATCGTTCAATGAC 225061 33 100.0 33 ................................. TTATCACCTATTTCCACTATTAATAGTTTTTTC 225127 33 100.0 36 ................................. AAATCTAATAGAAGAACTACTAGTTTTCGGGACAAG 225196 33 100.0 34 ................................. AATATCTCCATCATCTTGACGTGCTGAACGACCA 225263 33 100.0 35 ................................. TTTTATAGAATTGATAAGGAAGGATGAGTGAAAAT 225331 33 100.0 35 ................................. AGGAGCAGTGGCGACAATCGGCGGTGTTGAATACG 225399 33 100.0 35 ................................. AATAGATGATATTGTTATGAATAAATTTGAAGAAC 225467 33 100.0 36 ................................. ATTTAATGATATACAAGACGCAAAGCTGGTGGACGT 225536 33 100.0 37 ................................. TATTCGTCAGTTTGTTGAGATGGCAGACCAGGACGAC 225606 33 100.0 34 ................................. ATCGACCATACGTCCATCAACTGACACGTTACGA 225673 33 100.0 33 ................................. ATCTTAGCGAAGGCGGTGTCTGATGGATGGACT 225739 33 100.0 35 ................................. CTTTTTCATTGCCCTGGGACTTTATGGCGTTGCTA 225807 33 100.0 35 ................................. GTTGTAAGCATCCTCTACACGGTCATAGTGGTCTC 225875 33 100.0 34 ................................. CTAACTTAGTATAACATTAATCAATTTTCTTTGC 225942 33 100.0 36 ................................. TCTGCAAATATCTATTGCATAGTATCGTAATATCTC 226011 33 100.0 33 ................................. ACCTGTTAATAAATTTGTTACGATAGTTTGTAG 226077 33 100.0 37 ................................. AATACTATCTTTGTAGTTATCGTAAAAAATCGAAAAC 226147 33 100.0 35 ................................. CACAGAGGACGGAGAGGGCAATTTGAGATATTGGT 226215 33 100.0 33 ................................. TCCTAAATCACTTAAATTCTTTCTCAATTTAAC 226281 33 100.0 34 ................................. TGGCACTGGGCCTAAGTGGGATCAAAAAGCAAAG 226348 33 100.0 33 ................................. TACCATTAAAGACATACTAGATGGCGATGTAGC 226414 33 100.0 35 ................................. AAACGTTTCGATAATTTGGCAGTCTGATAATTTTT 226482 33 100.0 35 ................................. ATTTCAATGCTGCAAGCGTCACTGATGCCCCACGT 226550 33 100.0 34 ................................. CATTGCCCATCTACCAGCACCTACCGCGCCTTTC 226617 33 100.0 36 ................................. ACGTAATTCATCATCCATGTACTCAGCTAATACATC 226686 33 100.0 35 ................................. TTAGAAGAACATATCTTATGTGATCCACGTATCAA 226754 33 100.0 35 ................................. CAACCATAAATCATAGTTATTGACCATGGATAACA 226822 33 100.0 35 ................................. TCAATGCTTCCGCTTGTGATTTAACCTCTTGCTTC 226890 33 100.0 35 ................................. TAAGGTAGTTGCGAGTTTATTGGCAGATTCATTTA 226958 33 100.0 35 ................................. TTCATCGAATACAGGTTTAGCCACCGTAACATCTT 227026 33 100.0 35 ................................. TTGATTGTAAAAACGAAAAGTAAAAATTAACGCAG 227094 33 100.0 33 ................................. AAGAGAAAGCGCAAAGAGAAATGGAGTTAATGC 227160 33 100.0 34 ................................. ATTGTTTTAGATTTAGAAGTTACTAAGAGTTTTG 227227 33 100.0 34 ................................. GTTATCTAGACGAAGATGATGAACTTTATGAAGA 227294 33 100.0 34 ................................. CTCAAATATAGCTCATAAAAATAATATTTTTGTT 227361 33 100.0 34 ................................. CTCTTGACCAAGAACGTGGATAGCAAAGTAGTCT 227428 33 100.0 33 ................................. TTCCATTAAAGAAAGTTCATCCAAAGATTTTTT 227494 33 100.0 35 ................................. TATTAAATTGTATCAATAATGGCAAGTGTTGTCAG 227562 33 100.0 35 ................................. TTTCGTGGACACGCCAACGAGCAAGGATCGGTATT 227630 33 100.0 34 ................................. ATTGTGGCAAGAAAAATCTAGTCTAGCACACTCG 227697 33 100.0 35 ................................. GCCTGTCCATAGACCAATCTGTTTGAACACTCTCG 227765 33 100.0 64 ................................. GATATCTACAATGATTGAAGCAGAAATTACTGGTGTNTGTCCATAGACTGTTTGAACACTCTCG 227862 33 100.0 34 ................................. GATATCTACAATGATTGAAGCAGAAATTACTGGT 227929 33 100.0 35 ................................. TATAAGGTTTTCAAATATACGTCTTAGGTAAACAA 227997 33 100.0 35 ................................. GCCTGTCCATAGACCAATCTGTTTGAACACTCTCG 228065 33 100.0 34 ................................. GATATCTACAATGATTGAAGCAGAAATTACTGGT 228132 33 100.0 35 ................................. TATAAGGTTTTCAAATATACGTCTTAGGTAAACAA 228200 33 100.0 35 ................................. GCCTGTCCATAGACCAATCTGTTTGAACACTCTCG 228268 33 100.0 34 ................................. GATATCTACAATGATTGAAGCAGAAATTACTGGT 228335 33 100.0 35 ................................. TATAAGGTTTTCAAATATACGTCTTAGGTAAACAA 228403 33 100.0 35 ................................. GCCTGTCCATAGACCAATCTGTTTGAACACTCTCG 228471 33 100.0 34 ................................. GATATCTACAATGATTGAAGCAGAAATTACTGGT 228538 33 100.0 35 ................................. TATAAGGTTTTCAAATATACGTCTTAGGTAAACAA 228606 33 100.0 35 ................................. GCGTTAAGGAATATCAACGTAACTCCAGGAGAGCA 228674 33 100.0 36 ................................. ACCTACTTTTTTTCAATAGTGTCTCCAAAGGTGGTC 228743 33 100.0 33 ................................. ATGCTTAACAGTGATTTTCAAATTTTTATTGAT 228809 33 100.0 35 ................................. TGGTACTTGAACAGTTAAATTTACTTGTAATTGTT 228877 33 100.0 36 ................................. AGCCGTACCATCTTTATTAACTATCATGGCTTTACC 228946 33 100.0 36 ................................. ATGTGCACATACTACACGTTGGTCATCGCATGAAAG 229015 33 100.0 34 ................................. TAGTATTGTACCAGTTGTTTTTGGTACAGCACCT 229082 33 100.0 34 ................................. ATTTAGAAGTGCTTCATCTGGACTAAAGGATTTA 229149 33 100.0 35 ................................. TTTAAATCTACAACTAACTAAATATTGCAACTGGA 229217 33 100.0 36 ................................. CGTACATTAGTTGATCCTATGGACATCGATGAAACA 229286 33 100.0 34 ................................. AATAGCTGATAATCCAATGGAAAAAGATGTACTA 229353 33 100.0 35 ................................. GATCGAGTACAAGCCATTCTTACTAAACGTCCGAA 229421 33 100.0 33 ................................. AAGGTAAGTAAATCTTGCTCATCCTTAAACGTT 229487 33 100.0 36 ................................. CCAACGGCTTGGGCTATGGATGTCTAACGCACCTTG 229556 33 100.0 34 ................................. AAACCATTGTTTCAGTTTCCGTTTAGTGGTCCTT 229623 33 100.0 34 ................................. AGCTGTTTAATATCAGCCTGTAATGCGTCTATTT 229690 33 100.0 35 ................................. AGTACAGGTAAGGGTGCCGGAGGAGGTAGTGCTCC 229758 33 100.0 35 ................................. TATAAGTACCACCTAAAGAAACTCTAACAGCCTGT 229826 33 100.0 33 ................................. TTGAATGAATTCGTAATTTTCGTCGCCAGTACC 229892 33 100.0 34 ................................. CCTGTAAAATCAAACAGTACAGCAGCAATGTCAT 229959 33 100.0 38 ................................. CACCAATGCGCCAAAAGGGACATCATCAGCGTTTTCCC 230030 33 100.0 34 ................................. TATCAGCTTTACCGTAGACACTAGCTAAATCACT 230097 33 100.0 33 ................................. TGCCACTCTGTACCAATCCGTATAATCTAGCAT 230163 33 100.0 34 ................................. TACTATAGTCCAAATGGACAAATGGAAATGGAAG 230230 33 100.0 33 ................................. GTATGAGTACGATGAATACATGTTGTTTAAGCA 230296 33 100.0 35 ................................. TTTAAAGCTAACGACCTGAGCAAGGTTGAAGAAAT 230364 33 100.0 34 ................................. TATGAGTACAAGAATTAGTTATCCAGTAGAAGTT 230431 33 100.0 34 ................................. ATATGATAGTGAACATACATTTGTAAAAGAATCA 230498 33 100.0 36 ................................. TATACTTTCTGTTGCAATTTCCACAAGCTGTGTAAC 230567 33 100.0 33 ................................. CGTGTCGGCATGTTTGATGGTGAAAAATATTAT 230633 33 100.0 34 ................................. CAGAAGGTTTTTACACAGTAATTGCATCATGCAT 230700 33 100.0 34 ................................. AACAATGACAGGAGATAAGATTTTAAAAATTGAT 230767 33 100.0 34 ................................. AACTGGACGTTTTATTTAGAGAATTTCAAAAAGC 230834 33 100.0 35 ................................. TCAACTAAGACACCATTTATAGTTTTTCTACCTAA 230902 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ================================================================ ================== 97 33 100.0 35 GTCACTCTCTGTATGGAGAGTGTGGATTGAAAT # Left flank : GGGATATAGAAGAATATCCACCTTTTTTATGGAAATGAGGGGCTTACATGTTAGTATTAGTCACTTACGATGTTGTCACGAAAACACCTATTGGCCGAAAGCGATTACGAAAGGTTGCAAAAATATGTGAAAATTTCGGAATACGTGTGCAAAATTCAGTTTTTGAGTGTGTAGTAGATGCCACTCAGTTTAAGCAACTACAACTCGCACTACAGGAGATTATTGATGTGGAAGAAGATAGTCTACGTTTCTATCAGCTAGGCAACAATTACAAATCAAAGGTTATTCATATCGGAGCAAAAGAAACATTCAATGTTGAAGATACAATAATTTTATAATCGGTGCGGATGCCAAGCAAACATAAATTCCTAGAGAGATCCGCACCAAATTTTGATGAAAATTCAATCATCAGAAATGGTAAGAATGGTATGAAAGAATTAGAATGAAAAGATAAATAGCAAAAATCGTTTAGAGTTATTATTTTTTTATGAATTTTTGCA # Right flank : TAGCAGGAACGAAATGCTCTACTGTATACGTAAATGTCACTCTCTGTATGGAGAGTGTGGATTGAAATNNNNNNNNNNNNNCTCTGTATGGGTGGATTGAAATGCAACTAGAAAGGAAGAAGTATATGGGAGAAAATGTTACTCTCTGTATGGAGAGTGTGGATTGAAATTTTTTTATATTGGAAGGTTTTAAATTAACATCCCAGTCACTCTCTGTATGGAGAGTGTGGATTGAAATCTTAAACCCTGTAGGCGTTACATAATTAGGTATAGTCACTCTCTGTATGGAGAGTGTGGATTGAAATTGGACCAGGTACGAACCATAAAATTCTTGGGTGTGCGTCACTCTCTGTATGGAGAGTGTGGATTGAAATTAATTTTTCTTTTGGTCTTGGTGCTGTGCTGCCAGTCACTCTTTGTATGGAGAGTGTGGATTGAAATACTAGGCATAATCATGTCACTTGTGGAGGGCATAACGTCACTCTCTGTATGGAGAGTGT # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCTCTGTATGGAGAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.58%AT] # Reference repeat match prediction: F [matched GTCACTCTCTGTATGGAGAGTGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.00,-2.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [80.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.64,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //