Array 1 60793-67222 **** Predicted by CRISPRDetect 2.4 *** >NZ_RHOF01000013.1 Loigolactobacillus jiayinensis strain 257-1 contig13, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 60793 36 100.0 29 .................................... TAAGACTGTCTCATAGTCTTAGTACCGTA 60858 36 100.0 30 .................................... GTCTTACAAGCAGACTTATACGACAACTGT 60924 36 100.0 29 .................................... AATCTGTACTTGCGATGTTAGCCACTCAT 60989 36 100.0 30 .................................... GCGTCTGAGTGCGTTAAAATAGGATATACA 61055 36 100.0 30 .................................... GACTGATAACGGTTATAACGGTACCACAAC 61121 36 100.0 29 .................................... GCATTGTGACGTAAGTATCACCTGTCATG 61186 36 100.0 30 .................................... GAAAAAGGCCAGTGATTCATCGTTGCTGGT 61252 36 100.0 29 .................................... TAAAGTCGTTACATCGACAGAATGAAGCA 61317 36 100.0 30 .................................... ATCAACTGCACTGTCAGCTGTCGATCGTGC 61383 36 100.0 30 .................................... CACGGTGAATAAATATTGTCCTTATTTTAC 61449 36 100.0 30 .................................... CCATTAGCTGCTTGATCGCATCTCCCATTG 61515 36 100.0 30 .................................... GTAAAGCGTCCTATTAATCTGTCGATATTA 61581 36 100.0 30 .................................... GGCTGTTACCAACATCAATCACAACTTGGG 61647 36 100.0 30 .................................... ATGCTTAATATTGGCTTAGGGCTACCGACT 61713 36 100.0 30 .................................... AATAATCTGCTTAACCGCAGGTACACCAAT 61779 36 100.0 30 .................................... GTGAAAGCATGAACTATAGCGAAAAAGTTT 61845 36 100.0 30 .................................... AGGCTTAGTCAAGCAGTTAACCGGCGGTGA 61911 36 100.0 30 .................................... TATAATAAGCGTGCACCGTTTACCATTAGG 61977 36 100.0 30 .................................... AAATATAATCATCATCAGCGCTGTCAACTC 62043 36 100.0 30 .................................... TCCTTGACCTGTAACAATGATATCTAGTTG 62109 36 100.0 30 .................................... AGACAAACCGCAGATTCAAAGCTTTCTAGA 62175 36 100.0 30 .................................... ATGCCAGACCCACAATATCGGTATTTGATT 62241 36 100.0 30 .................................... GGGACTTATTATAAAGACCCTACAGCGGCC 62307 36 100.0 30 .................................... GCCTATCATGATTCAGTACCAGCTATTCGA 62373 36 100.0 30 .................................... CGGCTGTCGCTTTATTAATAGATTTCTCTC 62439 36 100.0 30 .................................... TTGCGTTAGCAGCCTTTTTTACTAATACAG 62505 36 100.0 30 .................................... CCAATCAGTTGCGTGAGAACCGAGCTCTAG 62571 36 100.0 30 .................................... CCCAGCAATGGGCGTTCTTTTCGCGTACAT 62637 36 100.0 30 .................................... AGACGGCATCTATACTGTCGATCACAAAGA 62703 36 100.0 30 .................................... ACAGTAGTTTGGGCTATCCAGTTATCATAA 62769 36 100.0 30 .................................... CTGCACACAGTTTTAGAGTTCGCTTTTTGA 62835 36 100.0 30 .................................... TATACGTTATGCTGGGTTGCTGTCCATGTT 62901 36 100.0 30 .................................... AGGATGTCGTTAACCAAAATCTAAAAAAAT 62967 36 100.0 30 .................................... GATCACATGCCAAACAATACTTGCATAAGT 63033 36 100.0 30 .................................... TAATCAGCCCATGATGACAGCAGAAATTGC 63099 36 100.0 30 .................................... TTCTTGCAGCCAGAGATTTAGGTTTTTGTT 63165 36 100.0 30 .................................... ATTATCCAATAACAGATATAGAATTCAATA 63231 36 100.0 30 .................................... AAACTCTTATCTATTGAATCCGGTAAAAAA 63297 36 100.0 30 .................................... GTGCTGTTGCTGAATCAGCAATATAGAATA 63363 36 100.0 30 .................................... CTGGAATATCCACGCTTTTCTACAATGTCT 63429 36 100.0 30 .................................... TTGTGAGCGCTGATCCAAGAAGCAATGCCG 63495 36 100.0 28 .................................... CTATATGCAAACAGACCAGTATCTGTAT 63559 36 100.0 30 .................................... GTAGTATGTGAATGGTGCCAAATGTTCGTG 63625 36 100.0 30 .................................... TGATTTCTGCTTAACACCTGCCGATTGTGC 63691 36 100.0 30 .................................... CAACAGCAACCGGCACGTCATTTGCCTTGA 63757 36 100.0 30 .................................... GGCAAGACGCATTTAACATTAGGCCACAAA 63823 36 100.0 30 .................................... CCGGTACTGCTGCAGCGACTAGCACGTACA 63889 36 100.0 30 .................................... ATCAGTTTGCAGCTTGGCTTCAACCTGCTT 63955 36 100.0 30 .................................... GTCATAATTAGGTGGTGTATTAAACTCAAA 64021 36 100.0 30 .................................... CGACATGGATAAAGCCAAGGAACTTATAGC 64087 36 100.0 30 .................................... GTATCCACTATCTACATCAATTCTATCAAT 64153 36 100.0 30 .................................... TGGGCATGTGCGCTATGACATGGTCAATTA 64219 36 100.0 29 .................................... TGGACTGATGCTGGTATGACCTATATTAA 64284 36 100.0 30 .................................... GATAAATCATTTGTTATTGCCCGAACGACC 64350 36 100.0 30 .................................... CCGCTTACCGCTCTTATCATAGTAGTAAAC 64416 36 100.0 30 .................................... ATCAACAACACAAACAACACAGGAGGCTGA 64482 36 100.0 30 .................................... TAAGCGGACTGCCGATGCTGTTAGAGGACA 64548 36 100.0 30 .................................... TGATGAGGAGGATTACTACTTTGAGTAAAG 64614 36 100.0 30 .................................... GCTGTCACTCTCATATTCATGAATTGCTTT 64680 36 100.0 30 .................................... ATCTGTAAACTTTTTAGGCACGATCAAATT 64746 36 100.0 30 .................................... ATCATCATCCAGTGTGATTTTAGGTTCGAT 64812 36 100.0 30 .................................... CTCGATCATCTTAGCCTGCTCAATCTTCTT 64878 36 100.0 30 .................................... TCGGTTAAGGCATTCAACACGCTCTGCGTA 64944 36 100.0 30 .................................... ATTGATTATGGTGATTTATGTCGGTTTCAT 65010 36 100.0 30 .................................... TCTACGATTGTCTGAGTGTGATATTTTTGC 65076 36 100.0 29 .................................... CTTAGTTACGTTATAGTCTGGATACTCAG 65141 36 100.0 30 .................................... TGGTGCTACTACAAGTTCTGTCAAATTATT 65207 36 100.0 30 .................................... TGCTGGCACTGAATTAGAAGTGTATGGATA 65273 36 100.0 30 .................................... CGTTGCAGACGCAAGTGATGAGTATATCTA 65339 36 100.0 30 .................................... TGGGGATGTGCTTTTTTATTTAGTATTTTG 65405 36 100.0 30 .................................... ATTATTACCGCATTAATCCCGATTTTAGAA 65471 36 100.0 30 .................................... ATATCCGTTGGCTGACTGTGATTTTCCTTA 65537 36 100.0 30 .................................... ACATCAAAGGTGTATTCGTACATGATTGAT 65603 36 100.0 30 .................................... CTCCTTAACTGGTGGCCCTTGATTACCGTT 65669 36 100.0 30 .................................... ATGGATATCAGCATAAACGATATCAATATT 65735 36 100.0 30 .................................... ATATGGATACGTTGAAAAAGAAATTATAGA 65801 36 100.0 30 .................................... AGCCTACCATGTTAACCGTGGCCTAAACGA 65867 36 100.0 30 .................................... AGCCGTTGGATCGCCACCAGCGGCATAGTG 65933 36 100.0 30 .................................... AGCTACTATGGTTCTTACCGTCATACCTTG 65999 36 100.0 30 .................................... GCAGCTAACAGATGATTTGACACCTTACAA 66065 36 100.0 30 .................................... ACCAGCTTAGCAACAGCGTACGGGGTTGGA 66131 36 100.0 30 .................................... CCTTACCGATATAAGGATTAATAAAATCAT 66197 36 100.0 30 .................................... CTCACGAACAACAACCTTTGGTTCATTCCC 66263 36 100.0 30 .................................... CCACTTGTCAGCTACCTCTACAACCCGCTT 66329 36 100.0 30 .................................... GTCCTTTTGTTCTAGCCAACGGTTAAACCA 66395 36 100.0 30 .................................... AGTGGTAATGCCAGCATACCGATGGATCGT 66461 36 100.0 30 .................................... GACTGTACTCTTATCAAAATTAGCAGCCAC 66527 36 100.0 30 .................................... ATCCACAAATGATAATGTGCCAATTTGCGT 66593 36 100.0 30 .................................... CTGCGTTTCGTCGTAACTTAAAATCGTAAA 66659 36 100.0 30 .................................... CTGGGTATTGGAGTTTATGCTAAATTTCAA 66725 36 100.0 30 .................................... CAAGTCCGGTGTCTACTTTATTGAGGGGTG 66791 36 100.0 30 .................................... ATAAAGAGTTCTTCGAACAAGAACCGCCAA 66857 36 100.0 30 .................................... ATATCCAGTGGCTTTAGAGACAGGCTCGGA 66923 36 100.0 30 .................................... TAATCAAGTGGCTGATCTATCTCGCAAACT 66989 36 100.0 30 .................................... AGCAGTTGATGACACTGGCGCGGCTGCAAG 67055 36 100.0 30 .................................... GTGTTTGGCACCTTGTTGCCAGCTGCATCA 67121 36 100.0 30 .................................... TGTGCTTGTAAGTTGGTTACTCAAAAGTGT 67187 36 91.7 0 .................................TAA | ========== ====== ====== ====== ==================================== ============================== ================== 98 36 99.9 30 GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC # Left flank : AATGAATTCCATTCGTTGAGTAATGCGGTTCATAAATCAGTCTCATCGTACACCACTTGTTGTCGTAATAACTCTGCTGCGGGATTAAAGTTGCCGGAACTTATCCCGTTAGTGGCGCACGAGTATGAGTAGCAAATATATGCGTTTATTAGTTATGTTTGATTTACCAGTAGTAAAGGCAAAAGATCGCCGTGCAGCCGCAAAATTCCGGCAGTATTTATTAGGCGAAGGCTACGTAATGATGCAATATTCAGTTTATTATCGCATCGTTAACGGCTATGATATGTCAAAAAAATACGAGCTGCGGCTAGATGATAATTTGCCCGAAAAAGGGTCAGTGAGATTATTGGTTATAACCGAGAAACAATTCGATGAAATGCGTCTGTTAGTGGGCGATCCGCTGCCTAACGAAGAAAAAGTTGATAGTGGCCAGATGACCACTTTTTAGACAAGCGAAAGAGCCTGATATCCGCGTGATATCAGGCTCTTTTTGTGTACTG # Right flank : AACCCTAATTTCCCAATTTAATAGCTAGGGGTTATCTTTTTACCCAGCGTAAAAATCGATGTGTTATCATATGCATATAGCTTATTTTAGCAAAATAAATGCAGATTTACATACTCCTGGAGTGAATAACTGATGTCTTATCAAACAACCCTAAGTACGCGGCCGTTTATGTACATAGAAACAAAAAAAGTAGCACAGCGGCTCAAAGACGGCCAGTCGACAGCTGAAGTGCGGACCGCCGCACTGACACAGAATTTTTTGCAGTTACCATCGCGTGCCCGACGATCAGCGGCCATTAATGTGATTTTAAAACGACTTGCTAATTTGGATGATTATTTGTTGCGCCAATTTTTAATGGCTGATCGGGAAACGAGTGATTTGATTTTATTGTACGCATTGATGGGCAGTGACCAGTTATTTCAGGAATTTATGCGTCAAGTTTATTTACCGAAACTTACTGGGTTGGACACGACATTGACTAAACAAGATGGACTAAAATT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.10,-0.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //