Array 1 101882-99091 **** Predicted by CRISPRDetect 2.4 *** >NZ_NESG01000002.1 Limnohabitans sp. G3-2 LimC-G3-2-C2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 101881 28 100.0 32 ............................ GCGTTGACGCTGACCGCGCTCGCACTGAGCTT 101821 28 100.0 32 ............................ AAATATGGGACACCGCGCAAGCCATTACCCAA 101761 28 100.0 32 ............................ AATGCCGAAGTGGAAAACCACAGCTTTGAGGT 101701 28 100.0 32 ............................ TCGGCGTGGGTTAGGCCGCGTTTGGGGGTCAT 101641 28 100.0 32 ............................ CAGGCGGCCGACGTCAAAACGAGAAACGACCA 101581 28 100.0 32 ............................ ACTGTGCGCGAGTTCAATCCCCACTATGACCC 101521 28 100.0 32 ............................ AATTGCTTGGCCTCTTTGACCGCTGCGGCGCG 101461 28 100.0 32 ............................ TGCTCGGCCAGGGTGATGCGCTCGGCGTAGTT 101401 28 100.0 32 ............................ TCATAAGCACAAACGGCCCCGGCAATGGCCAT 101341 28 100.0 32 ............................ TCGATGACCGATTGCGCCACGCTGTTGCAGAT 101281 28 100.0 32 ............................ TTGATGTTGCCAAGACAATTCTGAACCGTGAA 101221 28 100.0 32 ............................ ACAACTGCCCGATGCCAACATGGCAAGACCAC 101161 28 100.0 33 ............................ TTGATGCCGTCCGCCGTCTCAATGGCTTCTTTT 101100 28 100.0 32 ............................ ATCGCCCATGCATGACAGCACGTCATCCCAAA 101040 28 100.0 32 ............................ TCAAGTGGGCGTGGGAGATCAACGTGCCCGAG 100980 28 100.0 32 ............................ AGCGTGAGGCGCGTGCCGCCCCGGCTTAAAAA 100920 28 100.0 32 ............................ CTGGCAAGCGCCCGCCGTGGGCGCCCGCCAGC 100860 28 100.0 32 ............................ ATTGACAAGCTGGAGGCACAGCGCACATGGGT 100800 28 100.0 32 ............................ GAATAAGGGGCTTTGCCATCGATTTCCATAAT 100740 28 100.0 32 ............................ ACAAAGGTCAGGCTGGCCGCCGCGCCGCTGTT 100680 28 100.0 32 ............................ ACTTGGGCCGGGTAGAGCGTGGCGCTGGCCAC 100620 28 100.0 32 ............................ GACACCGAGCCCAACGTGCTCGACACCCTGAA 100560 28 100.0 32 ............................ TATTCAGAATGGCTCCGGCTTGGGGCGACCCT 100500 28 100.0 32 ............................ TTACTCAGAATGGCTGCGGCTTGGGGCAACCC 100440 28 100.0 32 ............................ ATTGGCCAGTAAAGCGCCCACGTGCGCACCAT 100380 28 100.0 32 ............................ ACCGGGCGTAATGCATTGACAAAATCCAACCC 100320 28 100.0 32 ............................ TTGGACTAAGGATCATTCACGAAGCGCTTGCA 100260 28 100.0 32 ............................ GCAGGCGTGACAGACGAGCGTGGTGGCGAATC 100200 28 100.0 33 ............................ ACATAGCGCGCGTACAGCGTGTGTGTGCCTGCG 100139 28 100.0 32 ............................ AAGAAGGGCTTGGTGCAGGTGTAGGGCGTGCC 100079 28 100.0 32 ............................ AATTCAGCTTGACTTGGACATGACCGCACCAA 100019 28 100.0 32 ............................ GCCTTGGCCCTCGCGCAAGTGATGCACTTGGG 99959 28 100.0 32 ............................ TACACGGGCCAAGCGGGCACCGTCCACAACCC 99899 28 100.0 32 ............................ TTTTGGCCGCATCCCTTGTCGGTTGGGTACTG 99839 28 100.0 32 ............................ GTTTTCGGGCCACTGGCCTCAAGCCCCTCATC 99779 28 100.0 33 ............................ ATCCAGGCGCTGATCGTCAAAGCCAGGGATGAA 99718 28 100.0 32 ............................ TCAGTTAGCGAAACTCATTTGTGTCGCTTCTT 99658 28 100.0 32 ............................ GCTCAGCGCGAGGTGCTGGTGCATGGACAGCG 99598 28 100.0 32 ............................ ATGCCCCGCAATGTTGCACCAAGTCGCAGCCA 99538 28 100.0 32 ............................ AAAGGGAAGGCGCAGGAGAATCAAATGACTAC 99478 28 100.0 32 ............................ TTGGAGGCGCTGGCAGATCAGCCAGCACCCGT 99418 28 100.0 32 ............................ AAAACAACAGCGGCAAAACACCACCCAAGCCT 99358 28 96.4 32 .......................G.... ACCACCCCCATCGCACCCCTCAAGCGCTTTGA 99298 28 100.0 32 ............................ AGCTTGCAGTAGCTGTCGCCGCCGTTGGCCGA 99238 28 100.0 32 ............................ GCCGTGCCTGGAAGCGGCGCCAAGCTCGACGC 99178 28 100.0 32 ............................ TCGCAGGTGCTCAAGACCGAGGTGTTGCTGAA 99118 28 96.4 0 ..........................G. | ========== ====== ====== ====== ============================ ================================= ================== 47 28 99.8 32 GTTCACTGCCGTGTAGGCAGCTCAGAAA # Left flank : TGCAAGCCCAGCCGTGGCTCGGGGCCATGCGCGAACTGGTGCAAACCAGCCCTATCGCCACCGTGCCCGCCACGGCGCAGCACCGCGGCGTGCGCCGCGTACAGGTGCAAAGCAGTCCCGAGCGGGTGAAGCGCCGCTTGGTCAAACGCCTCATGCAGCGCGAGGGCATCAGCGAGGCGCAGGCGCAAGCATGCATCCACGTGCCGCTAGCGCCCAAGCTGAGCGACCCGTTCATCAACCTGCAAAGCAACAGCACAGGCGGGCAGCGCTTTCGCCTCTTCGTCCGCCACGGCCCCATTCAGACCAAGCCTGTGTCGGGCGAATTTGGTGCCTACGGTTTGAGTAGTCAAGCTACCGTGCCCTGGTTCTGACCCTTTTTTTCTGGCCCAGTTGCAAACCCTTGTAAATCAAGGACTTGCAACAGGGGTTGGAATTTGGGATTTTTTGGACATCCCTAAAAATACCCTGACGGGTCAAACACTTAGTGGCGATTGGGTGTA # Right flank : GATGACCCGTGGGCGGCTATTTCTCCAGAGAAGCTTTAGCAGCCTGCTGCGCCTTGTAAACCAGTTTGCGCGCCATGCTCCAGCGGTGCACTTCGCTCGGGCCGTCATAAATGCGGAAGGCGCGCATGTCCATGAAGATGCGCATCACGGGGGTTTCGGTGGTCACGCCTTGACCGCCGAGAATTTGCACGCAGCGGTCCACCACGCGCCATTCGGCTTCGGAGCAAGCCACTTTGGCGCGGCTCGATTCAAAGCCGCCTTTGTGGCCTTGGTCCAGCAGCCAGGCGGTGTGCCAGATGTGCAGCCGTGCGGTGTGCAGGTCGATGTCGTTGTCGGCCAGCATGAAACCCACACCCTCGTGCTCGGCCAGTGCTTTGCCAAAGGCTTGGCGGCGGCTGGCGTAGGCCAGTGCGATGTCGTGTGCGCGCCGGGCCTGTCCCAGCCAGCGCATGCAGTGCGTCAGGCGTGCGGGTGCCAAGCGAATTTGGGCGTAGCGAAAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGTAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTGTAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [45.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //