Array 1 74853-79292 **** Predicted by CRISPRDetect 2.4 *** >NZ_VKNW01000007.1 Chryseobacterium echinoideorum strain CC-CZW010 scaffold7.1-size242687, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 74853 47 87.2 30 AAAA......A.............C...................... GAAAATTATGAAGAATATAAGTCAGGTTTA GCG,C [74857,74862] 74934 47 100.0 30 ............................................... AACATAGGGACTAATTTTCCCATCGGCATT 75011 47 100.0 30 ............................................... CTACGTTGCTGTGCCTTTTTCTCAATATCC 75088 47 100.0 30 ............................................... ACTTTTAAAGATTTCTCAAGCGGCAATTCA 75165 47 100.0 30 ............................................... ATTAGTTTTAAACGTGCCGTGGACCGTCGA 75242 47 100.0 30 ............................................... ATTGTTATTTATATTAATAATTACCATTAT 75319 47 100.0 30 ............................................... AGCCTATCAACAAGGTATTCCAAGACAATG 75396 47 100.0 30 ............................................... CCTATAGAGGTGGACTAAGACTATAATTAT 75473 47 100.0 30 ............................................... TTAAAAAAATAATATTATGATTACTACTTT 75550 47 100.0 30 ............................................... CAGTAGAAGGTGATAACAAAGCCATTGACA 75627 47 100.0 30 ............................................... CAATATGCCGCGCAAGATCTGATATATTGA 75704 47 100.0 30 ............................................... TCATTAGTTACAATTTCTTTTACAAATCCT 75781 47 100.0 30 ............................................... TATGTACTCTATATACTCGCCAACTGCTTT 75858 47 100.0 30 ............................................... AAGCTCTCTTCTGAGTACGTGTAAGTTACG 75935 47 100.0 30 ............................................... CCAATCTTGCGTCATCATATTTAACATTAT 76012 47 100.0 30 ............................................... GAATCTTCAGACTCAGCTTGCTGCACTGCA 76089 47 100.0 30 ............................................... GAAGCAACAAAATTTATTCAGTCGGTGCAG 76166 47 100.0 30 ............................................... CATATTCCAAAACCTGCAATGGAAATGTTT 76243 47 100.0 30 ............................................... TGCTTTCGAATTAGGATTAGATATTGTGTA 76320 47 100.0 30 ............................................... AATAAAGTACCAACCCAAAAGCCCCGGAAT 76397 47 100.0 30 ............................................... GTAATTGCGCTATTGAAAAAGTCACCAGGT 76474 47 100.0 30 ............................................... TGACATTAGCCCCGACGTTGCAAGATTGTA 76551 47 100.0 30 ............................................... ACAAACTAAGTGATATACTGTAATGAACTG 76628 47 100.0 30 ............................................... TGCTCGCTTCTAAAGGGCTTGCATCTGATT 76705 47 100.0 30 ............................................... CCTAATGGTACTAATAATCTTGTAACCGAT 76782 47 100.0 30 ............................................... AACATAGGAACTAACTTTCCCATTGGCATG 76859 47 100.0 30 ............................................... GTTAAAGAAGGATCTAATTTCTGTTTTTTT 76936 47 100.0 30 ............................................... CTCATAGAGAGTTCTAACCATCTTTGTATT 77013 47 100.0 30 ............................................... CCTACGTTGATAGAAGAAAGCCAAAATCTT 77090 47 100.0 30 ............................................... TTTTTCTTATGACATCTCACCTTACGCCAA 77167 47 100.0 30 ............................................... AGATTAGGAGTTCGAGTCTCTTTAAGATCA 77244 47 100.0 30 ............................................... TGCGAGGGTACTGAGGATTATACTGTTATG 77321 47 100.0 30 ............................................... GGACAGACAACAACGTTGCACAATTGCCGG 77398 47 100.0 30 ............................................... GTGAGCTAAAAGGAGCAGAAGTTGGTTCTG 77475 47 100.0 30 ............................................... AATAAGGGGAGATATGATTTTCGATAAGGA 77552 47 100.0 30 ............................................... TCTAATGTTAGAACTACTTTTGCTTCAAAT 77629 47 100.0 30 ............................................... CCTCTCTATGCTTACATGAATATGATCATC 77706 47 100.0 30 ............................................... TGGTGGCTGTATGTTTTGATTTTTGTTTCC 77783 47 100.0 30 ............................................... ATACAAAGATATATTAAATATTTAATACTT 77860 47 100.0 30 ............................................... CAAATGAAATGACTTATGGTATTGCAGTTA 77937 47 100.0 30 ............................................... TGACTTTATCAGAAGGATTGAAAAAGTCTT 78014 47 100.0 30 ............................................... ATATTTAGTGAACTAAAAGCGATTAGAAAA 78091 47 100.0 30 ............................................... GATATGAGAACCCTGCCTTTTTCTGCAAGT 78168 47 100.0 30 ............................................... TCCCGAAGTATTCCGACGAATTTTACCGCA 78245 47 100.0 30 ............................................... CTTTACCGAAGCTTCTGAACGATTGATTAA 78322 47 100.0 30 ............................................... TACTGGTTTTGAATTGTTTCTTGAAAAATT 78399 47 100.0 30 ............................................... GCCGACAAAAGATAAACATCTCAGCATCGA 78476 47 100.0 30 ............................................... CATCACCGCTGCATAAAAAATCTCATCACG 78553 47 100.0 30 ............................................... CTTTTGAGAATATGGAGCGTAATTTTAACC 78630 47 100.0 30 ............................................... AAGATTATAAAGGATTTGCAAGGAGATTCT 78707 47 100.0 30 ............................................... GAAACATCAATACTCCTATTTGATAATGTC 78784 47 100.0 30 ............................................... ACCATGCTTCGACCAGATGCTTTCTGTCGA 78861 47 100.0 30 ............................................... TCATCAATCATACCTGACTGTTCTTTCAAG 78938 47 100.0 30 ............................................... AAATGGCTTCCGATGCAATAGGCGGAATTT 79015 47 100.0 30 ............................................... CACGGCTTCCGGCGAAGCATGCCGTAACCT 79092 47 100.0 30 ............................................... GATGCAGGATATAGATATATATCACAGCTT 79169 47 100.0 30 ............................................... ATGCGGAAGCGGATGGATGATATTCACGTT 79246 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 58 47 99.8 30 GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATGAAGGACAAC # Left flank : ATATCTTTAAACTGCTCATCAGTAAGCTGGCTGGCTGATTTTATTTTCATCATTGTAAAGCATTTTAAAATAAAGTATTTTTATTGCATACTGAAGTGTTTTTGATCTTCTAACGATAACTGATACAAATTTATTATTTCGCCATCAATATTTATTTCAAATTCATTACAAACAACTGTATTTTAGTTATTTATAACATCCTGTTACTTGCTTCATGCCACTATTATTTCCTATTAAGTAATTTGAATTTGGGAATATTAGGCAATAAAGTTCTACAATACAAAAGTTTTAATTTGATAAACCAGTTAACCTACGAAGAATGCTCGTCGAAGGTATAGGTTTTCGTATGCAAATAATTTATTTCAATTGTGAATTGCTCTAGCTGAGGAATTAGTAAATCTACTGCTAATTATTGAATCCGTCTTTTTGGCTTCACCTTTCTGGCTTCCAATTCTAAGTGCTTTTGAGATGTAATATAACACAACAACTTAGTATAATTG # Right flank : CCTCAAAAAATAATCTACTGGTTTTCAGTAGATTATTTTTATTTTTAGGATTTAAAATTCAGAACAATTCGAGCTGTTGGAAGGTTGGAGGGGGTTCTTCTTTATTTCTGGCAAAAAAGATTTCGATATCTCCAAATTGTTTATCGGTAATGCACATAATGGCAACTTTTCCGGCTTTCGGAAGCATAAATTTTACCCTTTTAATATGAACTTCTGCATTTTCGCGGCTCGGACAGTGTCGTACATACATCGAAAACTGAAACAAGGTAAACCCATCATCAATCAGTGCCTTCCGAAAACGGTTGGCATCTTTCATATTCGCTTTCGTTTCGGTCGGGAGGTCATATAGTACTAAAACCCACATAATTCGGTATGCATTAAACCTTTCGGCATTCATAGCAGTTCAGGATAAGAGATCAGCCGTTTTTCTCCTGTGTAGCATTTGTAAAGCGACGAAGCCGTAGTTTTTACCGCAACCAGCAACGGTCTTGTCTTGTCAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATGAAGGACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATGAAGAACAAC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-2.90,-2.70] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [71.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //