Array 1 7470-11184 **** Predicted by CRISPRDetect 2.4 *** >NZ_ALWJ01000028.1 Sulfobacillus thermosulfidooxidans str. Cutipay ALWJ01000028.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 7470 30 100.0 34 .............................. GGACCAAAGGAGCTAAAAAATGAATCATTTTCCC 7534 30 100.0 36 .............................. CCGCAAATCCGTGAGGGCCGGGACGGCCAGTTCCGC 7600 30 100.0 39 .............................. ATTCGGATTCTCTTGGTCCGGGTCCCACACGTGGTCCGG 7669 30 100.0 35 .............................. CGAGCTTTTCCGCGTCGTCAGTTCGGTGCAGGATC 7734 30 100.0 39 .............................. GCCTCGAACTGGAAAAGGACCGCAAACGCTTAGCCGAAC 7803 30 100.0 39 .............................. TGGTGCCGGCACCGGCGCATCCGCAACAAGCGGCACCCA 7872 30 100.0 35 .............................. ATCAAAAAGATCCCACCCGGCTGGCCGGTCCTCGG 7937 30 100.0 37 .............................. TCGGTATCGCCCGCATTCATGATCCACGCCTCAGACA 8004 30 100.0 39 .............................. GCGCCGTGGCTCCCATGCCCATCTCAATGATCACGGAAT 8073 30 100.0 37 .............................. ACACAATAGGTTCCATACCTCTATTATATCAGATTCA 8140 30 100.0 38 .............................. TAATATATCCCGTATCGGACAGAATGGAGTTCTGTCCG 8208 30 100.0 37 .............................. ACATACATCCAGTCTTGGCCGGCATTGTACACCACCA 8275 30 100.0 34 .............................. GCACTGCCTAAGCTTCCGGATGTGGCTCGCTTGA 8339 30 100.0 37 .............................. CCGTCCTTCCACAAATCGCTCACGTTCGGGACGGTGA 8406 30 100.0 35 .............................. CTCACCGGCATCAAAGGCGGCGTCTCGGAGCTCTC 8471 30 100.0 39 .............................. CCCGAAAGCAGCTTCAAAGATGTCCAACGAGCCGTCCGG 8540 30 100.0 38 .............................. CTCTCGGCGAATCCGCAAATCAGCAACCCGAACTTGAT 8608 30 100.0 37 .............................. TCCGAAAAGCTCCACCACGTACACCTTGACGGATCCA 8675 30 100.0 36 .............................. CCGAATAGGCCGTGGTGCCGACTGGGGATGATGACG 8741 30 100.0 35 .............................. AACATCGAACGCCTTTTTGAGTGCCGTGATGATCG 8806 30 100.0 37 .............................. GAGTAGGTGGACAACGTGCTGTCAAAGAGATAGAAGT 8873 30 100.0 35 .............................. CGGTCATCAACAATACCTCTTCGGCAGTCGGTGTC 8938 30 100.0 34 .............................. CAGCGCCGATACGGTGGAGGTTTCGACTCGGGGT 9002 30 100.0 36 .............................. AATCTCACGATCCAACACAATCGCCAGCGCAATCAT 9068 30 100.0 35 .............................. AATAGAAAGGATGTGATCAGAATTGGCTACAGCTA 9133 30 100.0 38 .............................. AAAAAATCGACATAGCCATAAACGGCACGGATTTTAAC 9201 30 100.0 39 .............................. TCTTCATAATGCCACCGCCTCCAGCGTAGGAGCCACGTC 9270 30 100.0 39 .............................. CTGCCCGCCAGCTTCACAACCCCAGCCGACATCACTAGA 9339 30 100.0 37 .............................. GAAGAATTCGACCAAAACCCCATCATCATTTGCAGGA 9406 30 100.0 36 .............................. AAGAATCTGTATCGCAGTAATAGACTGTGTTTCCCA 9472 30 100.0 40 .............................. TATCAACGGTAGGCGTCGTGACCGGAGGCGTAGAGCCCGG 9542 30 100.0 36 .............................. CTCGATCACGAATCCGTTTGGCTCAGTGATGTCGGA 9608 30 100.0 38 .............................. TTGTCCTGGTCGGCGGTCTTTTCCTGCTGAACCGGTAT 9676 30 100.0 34 .............................. CCTCTTCGGCTGCGCCGCAATCATCGTCGGCCAT 9740 30 100.0 39 .............................. ACCATCTTCGCAACTCCCGGTATCGAGGTATAATCTAGA 9809 30 100.0 38 .............................. GCAATAGTGTCTGCGGGGTCCGCATTCAGAATCGCTCG 9877 30 100.0 40 .............................. GATGATTGCAACCGCAATGGTGGCTTCGGGGCAGTATGAC 9947 30 100.0 35 .............................. TGGTGCACGATGTTGATGCGGCTCCCGTCCTCCGC 10012 30 100.0 39 .............................. TCGATCAGTCCACATCGGGGACACGTGCGCGACGTATTG 10081 30 100.0 37 .............................. ACGGCGACAAACTGGAACCCCATCCGGAGCAAGCGCC 10148 30 100.0 38 .............................. ATTCTGGTAATGGTCTGGAAGGGAGGAGAGGACCTTGG 10216 30 100.0 41 .............................. CCGGTCATGAGCTGGGTGGAATTGCTCGGGACAGCCCGGGG 10287 30 100.0 38 .............................. GAACTCTGCTCCTCGATACCGGCGATGGCACAGGTAGC 10355 30 100.0 37 .............................. AAGACTTTGGTGGCGACCCGAATAGCGCGGATGCCCA 10422 30 100.0 39 .............................. AACCAAATCATCCCAAGCCGACTTAATGCTGGTGCGGTA 10491 30 100.0 36 .............................. GTCTCACTAAGATTAGGATAGTCCAAGTGAGACCAA 10557 30 100.0 37 .............................. TCCACCGTCACCGGCGGGGATCCCCCATAGGCTGCTG 10624 30 100.0 35 .............................. GCCACCAACTTCCTCAGCAACCAGCGCGTGATTGA 10689 30 100.0 36 .............................. CATCTTTGTGTGATCCGATACAAGGGGTATCGGATC 10755 30 100.0 38 .............................. GGCGTCGTTCTCGGCTAAAAAGATGAGCTTCAGCGAGA 10823 30 100.0 37 .............................. AAGCTGACTGGGCCATCGCATATGCCCAATCTGGTAA 10890 30 100.0 39 .............................. TTCATATTTCCGAGGAGATGCGGCGCGGTTATGTCGAGA 10959 30 100.0 37 .............................. CCCGGTGGTGAGATCCACGATTTGCACCAAGCCCCCT 11026 30 100.0 35 .............................. CGCTGATAAAGGGCTTCGCCCAGGCGGGTTGTCGG 11091 30 100.0 34 .............................. AGGCCGTCAACATTCCTGGCGTGTCCAGTTTTGT 11155 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ========================================= ================== 56 30 100.0 37 GTTTGTAGCCTACCTATGAGGAATTGAAAC # Left flank : ACAGCCTCTAGCCGGGTGATTTTGATTGTTACGGTTACTTTAATCGGGTTGATAGGGTCCGGAATCTTCAGTGCACGTCTTTCAGGAACACCTCCTTTAAGGCCGGCTCTTCGCTTGTTTTTAGGCGGTGGTGCCGCAATGCTTATCACGGCCTTAGTTGGACAGTTGGTTCATGCAGCTGCTGTTTAGTTCCATTTAAGTACGACGTTAGCTAAAATCCTTAGTGTTAGAGAAGTCAGTTACGATATCGATTGTCTTCTAAAAAACAATACTTGGATATGGGCAAATCTTAACTATTTGTATCTCTAGTCCTCAAAAACCATAAGGTTGGGATTTCTGTCGTCGATCGCCAGTAGCGCAAAAACCCCCGGGGATCGACGACACACATCAAATCCCCGAAATGCTTACTACACAAGCTATTCACGATTTGTGTCCATAAAGTTTCCTAAAATTTCCATGAACATCGGCGTTGACAACCCAATCATAGAGCCGCAAAATGG # Right flank : CATGAGTCTTTCCCATAGATGCTATTTTTGTTAAGATAACCAAAGATTGCGGAAACATTTTGACAATGGATGAGTGGTCTGCTACCATAAGCACAAATTTCATCAAAGGTTTGCTAGGGTTCCGCTGGGAAGACTAGGACTGGTCCAAGAGCAAACGGCTCACGATTGAGCTACACGGAAGGATAAAAGCCTGGGAGATTTCATCAAGACGGCAGTCTTGGGAGTCTCCCAGGCTTTTTTATAAAACGCCATCTTCTTATCACAGGGAGGTTTCTGCCAAATGGAAATTATGTGGAGTAAAACCTTGCGACCTGGAGGCAAATGGTCGGGAATTGTGGGCCGCGGCAAGTTGTTACGCTTTACCGCGCTAGAAGGCGGTGCCAATCTCTCGATGTTGCTCTATAATGCTTGGAATCCATGTGAACGGTATAACATGCCAGATACCTTGAAAGCTCAACACACGGCCTATTTAACCGCAGGGAATGTCCTCATGAGTGATA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTAGCCTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.20,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [56.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.27 Confidence: HIGH] # Array family : NA // Array 2 31625-32595 **** Predicted by CRISPRDetect 2.4 *** >NZ_ALWJ01000028.1 Sulfobacillus thermosulfidooxidans str. Cutipay ALWJ01000028.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 31625 30 100.0 39 .............................. CAATCAATCTCATATGGCTATAAGTATGATTACCTATTC 31694 30 100.0 36 .............................. ACACTTCCATCATCATTCGTATCGTCCCCCTTCGTA 31760 30 100.0 35 .............................. GGAAAGTGCCACTCAGCACGGGAGCACGAGTCTTG 31825 30 100.0 41 .............................. TTCTAAAAATATTTATGATGGCGAGGAGTGTTTAAAAATAG 31896 30 100.0 39 .............................. ATCACGATCCAGCTCGCACGAACGGCCACGAAAAAGATG 31965 30 100.0 40 .............................. TCATTCCGTCCGCTTCGGTTTCCTTCCCGAAACTATCTAC 32035 30 100.0 34 .............................. CTCCAGTGGTATGTCGAAGAATACACCCTCCGAT 32099 30 100.0 35 .............................. ATCTTAAACACAATAACTTAGGGATATAATTGTGA 32164 30 100.0 36 .............................. CGCAAACATGGTCTCCGTATGGGCATCGGAGGACGG 32230 30 100.0 38 .............................. TCTGAACCCTAACCTTATCGTTGATGACTATCAGTTGG 32298 30 100.0 36 .............................. CGGCCTTGCACCGAAAACCCAGATTGCATCGTGCCA 32364 30 100.0 39 .............................. CCCCAATCGCGCGGCGTGACCGTGGAATCATCCGGCGCG 32433 30 100.0 35 .............................. GCTCAAACGGCCTTTCGGTGGGCGCAGTTGCGCAA 32498 30 100.0 38 .............................. AAGTCCTCTGGACGACGCAAAGTATGGCGCGTGTGGAC 32566 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ========================================= ================== 15 30 100.0 37 GTTTGTAGCCTACCTATGAGGAATTGAAAC # Left flank : TTCTTTGCATCTCGATATCGCCGAGATTTTCAAACCTAATCGTTGATCGGCTAATTTTTACCCTCATTGCGAAACGGATGATAACGCTTAAGGATTTTGGGCGCCTAGAGGGCGGAATCGTTATGTCGGAAAAGGCCCGGAAAACCTTTGTGGAAGGCGAATTGACCGAGGGGAAACTCAAAAAATTACAACGTGAACTCGGGGATATTATTAACCCTAACCCTTGAGAAGACTACCTCGTTATGTATGTCTTGGAGAATCAGTGGTCTCATTCCCGAATTCGTCTAGGGGAGTCGAAAGGTGAAGACGGATTTATTCTCTAGGCATCGGTGAATTTGTCGTCGATCGTCAGTAGCGCAAAAACCCCCGGGGATCGACGACAATCCCCAAAATCCCGAAAGCGTTATGCAATCACCTTTTTGGGATTTTATCGTTAACAACTTCCAACTATTGCCATATAGTCTCTGATTGACAATCCTGTCACAGAGCCGCAAAATGGG # Right flank : CATGGCAATATGGCTTGTGAAAGAATTGAAACTGCATTGGCGACCGCCAGGTGGTCAAGTAATAGATTTTCATGAGGACCTGTATGGTGGTATATGAAATAAGCTAAATGACCTTGTGATGAAACGGGCACAACGTCATTTAGCTTGATTGGCCGATATAAACAATGATTCTTCATATTATATAGTCGGAATCCCGATTTGTAAGTTGATAGCCAATGTTGTATGAAAGAAATATGACCCAAACGATGAGGAGAATGCGTACGGCAAGCCACCAAACGATCCGTACGGTAAACATGACTACTCGTAGGAGCCACAGAAACATTCGGACGGATAGTTTCAGTAACCCATACAAAATCGCGGCAGTGATCCAAAATACTTTGCTGTACCATGGCAGTCCCGATAATTCCTCCATGAGAATTTACCTCCTAACTAATTTGTTGTGCGAATCGTGTTGTTCCTTAATTCCCGGGTTCTCGTTTTGAGTTAGACAATGCTTGGAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTAGCCTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.20,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [55.0-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : NA // Array 3 94253-94416 **** Predicted by CRISPRDetect 2.4 *** >NZ_ALWJ01000028.1 Sulfobacillus thermosulfidooxidans str. Cutipay ALWJ01000028.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 94253 30 100.0 35 .............................. GATTCAAGCCGCCATTTATAACAGCATGCAGCAGA 94318 30 100.0 39 .............................. AAGAGCAAGTCTTACAGAATTTTCTCCGCAAGTATATTG 94387 30 90.0 0 ...T.....C.......A............ | ========== ====== ====== ====== ============================== ======================================= ================== 3 30 96.7 38 GTTCGTAGCTTACCTATGAGGAATTGAAAC # Left flank : AATTACCTCCACGTCACCGGCAAAAATCTTTGGATTGTTTCCCCGAAAAGGCACTATCGCGGTGGGTTCTGATGCCGATCTTGTCATATTCGATCCCGAGGGCAGTATGCTCTGGAGTGCGAAAACCCATCATATGCGTGTCGATTACAATCCCTATGAGGGACGCGTAACCCAAGGGGCTATTCGCTATGTGTATTCTCGCGGAGAGAAAATCGTAGACAACGGGCAATATTTTGGGAAACCAGGTCGTGGTCAATTTCTCGTCCGTAACCATTTCGTAAAACCTTAAGAAACAATGTGAATTTCAGATTTTTACTCTTCCACAGCCCCATTTGTTGTCGTCGATCGCCAGTAGCGCAAAAAACCCCGGGGATCGACGACAATCCCAAAAATCCCGAAACCCTTATGTAGCAAAGGTATAGGGATTTTATCATTATAAACTTCCAATACTTTCCATTAAATATCCAATTGACAATCCTTTCCTAGAGCCGCAAAATAGG # Right flank : CCCCATGGCGGTATCCTTGCGGCGAGCGAACAGAGGAAAGCCCACCGAATTTATTGGAATTTTCAACCCTATTATCGACATCATTTGAAAGATCATGCGAATAGGGATTAAACCGATACGTCGGGATACGCCGACAGTCCTCCGCGGAATAGTGGTGATAGGTATGTAAATGGTGAAACCAATGATCCAGAACGTGTCCCATAGCTAGATGATGCGGCTTGGGTATCAATGGAGTGAGACCTCCTAAACAATAGTCGTAGTTTATTCTAGTTGATGTGTCTGACATAGACCATGGTCTAAATGTGTAACCGACAATAGAGCACATATTTTCATCCGAGCAGAATTTTGAAGAATGTGCATCGAATCTCTATGAAAACTGTTCGATTCGTTCTATTCTCCAATTGAAATGACATTGCAAATGCTAACGACAATTTACACTGATAGATAACTTAAGACCTACCAGGTCCTCTATGACACCGATGTTGGCATCAGTCGGGAAA # Questionable array : NO Score: 8.20 # Score Detail : 1:0, 2:3, 3:3, 4:0.84, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTAGCTTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0 Confidence: HIGH] # Array family : NA // Array 4 103228-104337 **** Predicted by CRISPRDetect 2.4 *** >NZ_ALWJ01000028.1 Sulfobacillus thermosulfidooxidans str. Cutipay ALWJ01000028.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 103228 37 100.0 37 ..................................... GGCGTCTGAGGAACCGGTCGGAGTCGTGCCGCTCTTG 103302 37 100.0 34 ..................................... ACCCCGGATGCGGACCTGCCCCTCCCGTATTGGC 103373 37 100.0 35 ..................................... TAGGTGGTCACATGGTAACCGGTCATGCTAAAGGG 103445 37 100.0 34 ..................................... TTGCCGCAGCTTACCTCTCCAAAGCCCTTGCGCA 103516 37 100.0 34 ..................................... GGAGGGGCGATGCGAAGGCAAGGAGGGGTTTGCG 103587 37 100.0 35 ..................................... CCTTGTCCGGTTTGGTTTCGGGCGGCGGCGTTGCC 103659 37 100.0 34 ..................................... CAGTTGGAGGGTTTCAGGGTTTTGCGGGTCTTTG 103730 37 100.0 33 ..................................... CAGTTGGAGGGTTTCAGGGTTTTGCGGGTCTTT 103800 37 100.0 35 ..................................... CCATGCCTCCACCAAGATTTCTAAGGCTTCTTCGA 103872 37 100.0 34 ..................................... TCCATTTTCTGCACTATTTCGGCATTTCTTCCAG 103943 37 100.0 34 ..................................... CGTTTTCGCAAAGATCGGACTTAATTCCCTAGTA 104014 37 100.0 34 ..................................... TTTGTAAATATTGACGGCATTGAGGCCCTGTCCG 104085 37 100.0 36 ..................................... CCAGACATCCATGCGACAATTCGCATTCGTTTTGAT 104158 37 100.0 33 ..................................... CTTGAAGTGAGCCAGCGGGGATCCCAATTCCTC 104228 37 100.0 36 ..................................... AGAGCATGGAATTGCAACTCGATATGTATGCCGGAG 104301 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 16 37 100.0 35 GTCTCCCGGAGCAAAACCTCCGGGAGAGGATTGAAAC # Left flank : GTGGCACGTGGTCCGGAACAGGACATGTGAAATGATGATAAAGGAGCGAACCATGCACATTTTAGTGGCTTACGATGTCAAAACAGAGACGGTGGAGGGACGAAGGCGCCTTAGGAAAGTTGCTCAACAATGTTTGAATTACGGGCAGCGAGTACAATATTCGGTTTTTGAATGTCAGGTCAACGAGATGACGTTATACAAATTGCAGACCGCACTTGAAGCGATTGTCGAACCCGATGAAGACAGTATTCGAATCTATCACGTTAACCCTTCTAAGACATGGGTCAAGGGAATCGATCGGTACGTGGATTTCGATGAGCCCTTAATTTTTTGATGCGCGGATCCCAAGTGACGATATGGGGACGGGAGGTTCGCGCCAGAACGACCGTCATCCTTCTGGGCGATGAAAAACTTTTTGATGGGTTAAAAAATTCTCTTGCAATCGGGTTCGCGAAATGCGACCCTGGAAACCATACGCCGCAACCATTAGCGGATACGGC # Right flank : CCATTCCATAAGGGACTTAAGGGGGTACTACTCAACGTCTCCCGGAGCAAAACTGGATGTTAGTCTAAATTGTGGACACCTCGAATTGAGACAAGATGATACAATAATTCTCCATTGAGGTGAATCCGATGGCCAATCAATATGATCGAGCGTTTAAAGAACAAGCGGTTCAACTCGTGTTGACCCAACAAAAAAGTGGCGCGCAAGTGGCGCGCGAACTGGGCATTCCCAGCAAAACCTTGTATGCCTGGGTCGCTGCCTACAAAGCCGATCCGGTGGAACCCTTTGTGGGTAGTGGGCATCTGAAAGCGGAAGACCAAGCCCTGCGCGATTTGCCGCGGCGTATTCGGGATCTCGAAGAGGAGAATGCGATCCTAAAAAAAGCGATGCGCCTCGTCACCAACGATCGGAAGTAATCTTTCAGTTCATTCATGAACACCGCTTCACCTTCTCGATCACGAAGATGTGCCAAATCCTCGACGTTTCGCGAAGTGGGTATT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCCGGAGCAAAACCTCCGGGAGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [11,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-10.20,-11.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [43.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.37 Confidence: HIGH] # Array family : NA // Array 1 33317-32496 **** Predicted by CRISPRDetect 2.4 *** >NZ_ALWJ01000036.1 Sulfobacillus thermosulfidooxidans str. Cutipay ALWJ01000036.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 33316 28 100.0 33 ............................ TCCCATTGGCCGAGGCCAGGGCTTGGACGGTGG 33255 28 100.0 33 ............................ TAGGCCGCCACGAGTTTCCCGTTGACATACTTC 33194 28 100.0 33 ............................ CGTGGTCGGCGTGGCTGGGACCACCGTGTCCAC 33133 28 100.0 33 ............................ TGTCCTCGGGCCATAAATTCTTGGGGCAGCCAT 33072 28 100.0 33 ............................ TCCCTCGCCCACACACATCGCAATAATGGCGCA 33011 28 100.0 33 ............................ TATAATGTGACGGAAGGAATCGACGGAGATGGT 32950 28 100.0 33 ............................ ATACCTGGAGTTGGGGTTGTGAATGCTCACCCC 32889 28 100.0 33 ............................ CCGGCTGCCATCGGTGGCCGCGAGCAGGAGACG 32828 28 100.0 33 ............................ CACGACCACCTATACCGGGTGGATCTTGGTCGA 32767 28 100.0 33 ............................ CCCCGGTGTTGAAAGTTCAATAAGTAGCAGAAC 32706 28 100.0 33 ............................ GAAGTCAAGCAGCGGTTGGAATGGACGGAGCAA 32645 28 100.0 33 ............................ CCGGCTGCCATCGGTGGCCGCGAGCAGGAGACG 32584 28 100.0 33 ............................ TTGACCCATTGGGCACCATTCCACCATTGCCAG 32523 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 14 28 100.0 33 GTTTCCCCCGCACACGCGGGGATGGACC # Left flank : GACAGCCGACGCATCCGTCACGCGACTGTGGTCCCCGATCCTCACGGTCCGCTCACTATTGTCAGCGGCGTCCTCCTCTTTATTGACCCCAGCTACATCCCGCACTGGGGAAAATTTCAAGAGGGTGGCCTCTATGATGCGTGTTGCGCCGTCACCCTCAAGCACCCCCATTACGGTCCCGCCGCTCACGGTTTTGCCATCGAAAGCGGGTGGGGCGATGGCACCTATCCGGTTGATCCGAACACCTATCGCATTACGTTTATTCCCTAACCAATCGGCTATCTGTTGATCATAAGAGGGGACAACGCGCCGCAACCCGTAGGCAGCATTTCGTGGTATCATGTTGTGGAGAGATCCTGGGATACCGGGAGGTCGATCTGTTAGAGTTCTGGGATACCCACCAATTACGTTGTTACCGGTGGATGGAATCGTTTTAGCAGGAAAAATGCAAACTGGTCAGAAAAAATAAATTTTCGCGCATGATTTTATTCCTGTCAAGA # Right flank : TTTTTGCAAAGAGTCCACACGCCCAATCAAGAGCAACGCGACGAGCCCGTCTCGGGCTGGCCTCTTAACACCGCACCGGGTGAATCGTGGGCGCCATGCCGGTTTGGCACTGTGCATAATACACGGCAGAAGCCCAATCGTGCAAACTCCCATGCATGCGGCGTTCATGGTCAAAACGAATCCGATTCCGCCCCCCAAATTTGGACATTTGCGATCTCTTTCACGCGGATACGCATGGGGACATCCTATCAGCCCTACGGGCTGGGACTGGGGGACAGGGACCAGGGCGTCACCTTGCCCCTGTTCCCCCGTGCAAAAGTCTCGCTCTGCTATACTCGACAGGCATCCAGGCCGTTTGTCCTCCCGCGACTCGTTGTCGCATCGTCGCCGGAGACCAAGATTCTCCGCTCCCATGCAGCCGATCTGGGTTATAAAAGGCCATCCATCGCGTTATGGCCGCATAGGCCTCGCCATCTGGAGCCAATGCTTGAGTCCAACAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCCCCGCACACGCGGGGATGGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [41.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA //