Array 1 214148-219636 **** Predicted by CRISPRDetect 2.4 *** >NZ_AAOH01000006.1 Pseudoalteromonas tunicata D2 1099591001424, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 214148 28 100.0 32 ............................ TTTTGGAGTTGATTATGAGCAAGCACAAAATC 214208 28 100.0 32 ............................ GGGCAGTGGCAAAAGTTATGAGTGCGTTGTAC 214268 28 100.0 32 ............................ TTTCCAAGATGAGCATAAATTACTAGCGCTAA 214328 28 100.0 32 ............................ AAACGGATCAAAATCAGGTTTAAATCTAAATA 214388 28 100.0 32 ............................ ATTTTAATACGCTTTTGCAATCATAATGAATA 214448 28 100.0 32 ............................ ACGGCAAAACCGTCGACGTCGTAGCCGTATAA 214508 28 100.0 32 ............................ GCCGTCCCTGTCCCAAAGAACCGCGCTTGCTT 214568 28 100.0 32 ............................ TTGCTTTTGATAAATTCGCAAGGCCTGATTCA 214628 28 100.0 32 ............................ AAAATAAAACTAAGGAATAAGACTAAAAACAG 214688 28 100.0 32 ............................ TCGAAATGGATTATAAGACCCAACAAGATTTT 214748 28 100.0 32 ............................ ACTATCTTTGGTTTGTGCAAACTCAGTTATGT 214808 28 100.0 32 ............................ TCTTCTTCTACTACCATACCCAACTCTAAATA 214868 28 100.0 32 ............................ GTACTCATACCCGTCTTGCTCGGCCGCTGCTA 214928 28 100.0 32 ............................ ACGGTCACAATCCGCTTCAATATCCCAAGCGC 214988 28 100.0 32 ............................ AAATTCAACAGTAGAATTCATGAAAAAAATAC 215048 28 100.0 32 ............................ ATTTACTTACCGCTCGATGACCGAATCTGTGA 215108 28 100.0 32 ............................ TTCAACCCACTGACCATCAACTAAAATTTTAA 215168 28 100.0 32 ............................ TCTGTCAGATATTAGCTTGACGTATTTATTGG 215228 28 100.0 32 ............................ GCACTAATAACGAAGTGGTAAGCGGTCGTTTA 215288 28 100.0 32 ............................ AGAATTAAATAATATATCACCTCCTCCATTAG 215348 28 100.0 32 ............................ AACAGGAGAGAATTTAAGCGCCTTACCTGTCA 215408 28 100.0 32 ............................ ATCAGTTTCACTAGTACCGATGGTGCTACGTA 215468 28 100.0 32 ............................ TTTTATAATCGACCAGCTGACAAGTATACTGA 215528 28 100.0 32 ............................ CGTCGTGCTAAGTAACGTTAACGTTTATATGA 215588 28 100.0 32 ............................ TTGGAAACTGGGTAAAACACGTGTTGTTTTCA 215648 28 100.0 32 ............................ TAAAAAGAGCTTTAGCTAAAAACACAAAAACC 215708 28 100.0 32 ............................ TGTAAAAGTAAATCCGAGCATATCATCAGATT 215768 28 100.0 32 ............................ CACTAACAACCGCACGCATTGCGGAATCTCCA 215828 28 100.0 32 ............................ TTCACCGCATCTTTTAGATAGTTATCAATTAG 215888 28 100.0 32 ............................ ATGAACGGCGGCGAGCATTACGCGTTCCGCGT 215948 28 100.0 32 ............................ ATGAACGGCGGCGAGCATTACGCGTTCCGCGT 216008 28 100.0 32 ............................ ATTGTGAATAACATTGTTTTGTTCATGTGATA 216068 28 100.0 32 ............................ TTTTCTTGCTCGTACTTAGCTTTTTGATGCTC 216128 28 100.0 32 ............................ TATGCGCTCGCGACCGTTAGTAACAGGTTGGT 216188 28 100.0 32 ............................ TAACCGTAAAACGTTGGGGCTTATTTATGTGA 216248 28 100.0 32 ............................ TTAAACCCCAACCATTTGGATCTGACTCTAAT 216308 28 100.0 32 ............................ AATAAGTAATAGAGTTATTGTTCGCTGTCATG 216368 28 100.0 32 ............................ TAAAAATTTATTGGGATCAGCCATAGGGCCAC 216428 28 100.0 32 ............................ AAATCAACAAAGCACAAGCAAACTACGACAAA 216488 28 100.0 32 ............................ ACTCGATGATTTTTTTAAATCTGACGCAACTT 216548 28 100.0 32 ............................ TGTGGCTGCTGAAAAGGACGCCAGCAATTGTT 216608 28 100.0 32 ............................ TGTCATAATCTTACGTTGTGTTGCTAGGTCTC 216668 28 100.0 32 ............................ TGTTTTATCAGCTAAAGCCGTACAAAGTGCGC 216728 28 100.0 32 ............................ ACTAAAAATAGTTAAAGCGCCTCTGCTGTTGT 216788 28 100.0 32 ............................ TCTCCCCGATGAAATTTACGATTTTTTCAGCA 216848 28 100.0 32 ............................ ACATAAGCACCTCTTAGATCGAAAAAGGGGCG 216908 28 100.0 32 ............................ GTCAACAATCGACACTGTTGTCGGCGCGAACA 216968 28 100.0 32 ............................ GGTATAAAGTCAAAGTCAAAAGTAAGGTTATT 217028 28 100.0 32 ............................ TTCAGTCGGGTTTAACTCGTAGAGACGGTTTT 217088 28 100.0 32 ............................ GAAAAATCAGCCTGTCTTTTATATGTATGAGC 217148 28 96.4 32 ............G............... ATGCTTAAATAAACATTGAATCCATTCAGTTC 217208 28 100.0 32 ............................ TAACGGCATTATCGGGTATAAAGTGGCCCGCT 217268 28 100.0 32 ............................ TATAAACACTTGTTCTGCCCCTTCTTCATCCT 217328 28 100.0 32 ............................ AAGAGCGTCAATCTTAACTAATTTTGACTGAT 217388 28 100.0 32 ............................ ACCAAGTGCGCCAAGATAATCAACGTAAACAG 217448 28 100.0 32 ............................ TTGAGATTTTCGAGGGTTTCATTTTCGTCTAG 217508 28 100.0 32 ............................ TAACAACTGTTGCCCTTGGTATAGGGGGTATT 217568 28 100.0 32 ............................ GCTACAATAAACACTCAATCGAACAATTACAT 217628 28 100.0 32 ............................ TCAATCAGAAAAGGCTCTGAATCTGTTGAAAT 217688 28 100.0 32 ............................ GCCTAGGCTCGGCACCGCCGAAACCAAAGAGG 217748 28 100.0 32 ............................ GATAACTGGCCTCACCAACTCAGCAGGGGCAA 217808 28 100.0 32 ............................ TGAATAACAATATTAAAACCATCAAATACTCG 217868 28 100.0 32 ............................ ATTTTTAGCCATAAAAAACAATGTTGCTGCGG 217928 28 100.0 32 ............................ GATAACCGACATTGCTAAATTCGAGCTGTTAT 217988 28 100.0 32 ............................ GTCAGGCGTAGTTGCAATGGATGTTAAAATAG 218048 28 100.0 32 ............................ TGCGCTATCGATGCGTTATACCAAAACGCCTG 218108 28 100.0 32 ............................ GTAACAGCCATTACTAACTCTGTAATCATTTC 218168 28 100.0 32 ............................ GATAAATCAGCAGGTGTACATAAACGATGGCC 218228 28 100.0 32 ............................ TTAATTGTAAGTTATAAAACGTTGTTTCGTTT 218288 28 100.0 32 ............................ TGTTCCATGCCGTCCACCTATCAATGGTGAGG 218348 28 100.0 32 ............................ TTAATTGTAAGTTATAAAACGTTGTTTCGTTT 218408 28 100.0 32 ............................ TGTTCCATGCCGTCCACCTATCAATGGTGAGG 218468 28 100.0 32 ............................ GGAATTGTTGAGCCAGGTCGATTTATCGACCA 218528 28 100.0 32 ............................ ATTTGTTAATTCGTTTTGCTTGATAAACACAA 218588 28 100.0 32 ............................ GTTAAAGGGCTAGGCTATGACGATTAAGACGA 218648 28 100.0 32 ............................ ACAATGAATACATCTAGCATAACCATCTTTTC 218708 28 100.0 32 ............................ GTAAACCGGATAACGCAGCTTTATTGACCTTT 218768 28 100.0 32 ............................ TTATTTCTCTCAGAGAGAGGTGCTGATACATT 218828 28 100.0 32 ............................ ATGATCCCAATCATAGCCGCGCCGCTAGCGAA 218888 28 100.0 32 ............................ TGTAAGTTCTGTCTGGCCGTTTAACTTCTTGA 218948 28 100.0 32 ............................ TGATTAACTCTGTTAGTTCAGATGGTAGGTGT 219008 28 100.0 32 ............................ TCAGTATTAATGCTGGTTAATGTTTCAGTACG 219068 28 100.0 32 ............................ GTTATTGAAGCCAGTTCTAAAGGCAATAATCC 219128 28 100.0 32 ............................ TTTTCGTTATTAGTGCACGGCCACGCTTAAGC 219188 28 100.0 32 ............................ TCAACAAGGCTGGTTGTGTTTGTATCTATCTG 219248 28 100.0 32 ............................ GTTCAACTTCACTTTAATTGATGTTTGACCGT 219308 28 100.0 32 ............................ TTGTTTCATAGCGATCACCGAAATTCTCTAAG 219368 28 100.0 33 ............................ TGTAGGTATCAAGTCTTGGCTCTCTAGTGTTAT 219429 28 100.0 32 ............................ TGATGCTAACATAGAGAAAGTGGCTTTAGCTG 219489 28 96.4 32 ..........A................. AGAAGGTGCTAATTATGGCGTGATGGACTGGC 219549 28 96.4 32 ..........A................. TTTTAACGCTTTACGCGCAATGCTTTTAGACT 219609 28 92.9 0 ..........A...........T..... | ========== ====== ====== ====== ============================ ================================= ================== 92 28 99.8 32 GTTCACTGCCGCACAGGCAGCTCAGAAA # Left flank : AAGTTTGCTTAATGATCTTCAAGGATTGAATTGGTTAGGCCCGCTAAATGGTTATTGCAAACTAAGCGATATTTTAACTGTTCCAGAAAATACTCAACATCGTATTGTTTCTGAAAAAAGAAGTAATTTAAGTAAGGCAAAACTAAGGCGCTTAATTGTCAGAGGTAGTATCGATAAAGAAGGTGAAAAACGTTACAAGGTAAAGATGTTAAGTCAAGGTTTTAATAATCCTTACTTAGATTTGTTTAGCAGCTCAACAGAGCAAATACACCGCAAATTCTTTGAGTTTAGTGAACTCAAATCTGAACCTGTTAATGGTACATTCGATTCTTATGGGTTAAGTAAAGTAGCTACTATACCTTGGTTTTAACCTTTTAATTTTGCTCTTTAAAAATATGACATAAAAACAGTGAGTTACAGCAGGTCAAATTTTATTAGGTTAAATTTAAATTTTTAATCTAATTACCTGTTGTAACTTACTTTTTGCCTGATATTCTATT # Right flank : ATTAATTTTATCGGAACGTGCTTTAGCCCATGCCCATAGCGAAAAGCACCAAGCCAACCACACTGCATTGCAGTTGAATGAGTACGCCAAGTTAAGCGAGTGGATAAACGACCCCGCTACGCAAGTGCTGTGGGAGTTTGAGCGCAGCGAGCTGTTGTTTGTAAAACGACTCGGTGAGGGATCAATCAAGGTTGTTGTGCGTTATCAAGGGAAAAGGGTTGATCTGGACTTATTAATCAATGCGCTGAAAGTCAAAACCAAAACCATCGAGAGCGGTATAAATGGAGGCTTGTATGAAGTATGGCGGTAGGGCGAGAATCGAACTCACATCACTGTTAAACAGCCCCTTACCAATCGGGGTACACCACCGCCTGACTAATTATTGCCCACAACCAAGGTGATTGCAATATGACCACTCAAATTGAGATCCTTACCCAAGGCAATGCCGCTGAGGTACTGGCGGCCATTGCTGATAAATTTAATGATCTGAGTGAGCCAAT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //