Array 1 404133-402443 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJKO01000001.1 Moorella sp. E306M sequence1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 404132 30 100.0 35 .............................. TCGCGTTTTACAAACCGGTCGATCCAGACGAACTG 404067 30 100.0 35 .............................. TCAGGCCGCAGGTGATTGTGGCCCTGGGTGCTTCG 404002 30 100.0 36 .............................. GTGCAGCCCGGCTCTATGAAGGCATGGAGCAGCGTA 403936 30 100.0 36 .............................. TGCCTCCACATCGAGGACACGGATGGGGCTTCATTA 403870 30 100.0 35 .............................. TTATCACCTTGTAAAAATTTTGATTGTACCCACGA 403805 30 100.0 36 .............................. TACGGGCGTCAATCATGCTGTCGCCCTTTACGACGA 403739 30 100.0 38 .............................. CGAAAAGTAATGTGGGAATGGTGGAGATGTAGAAAAGA 403671 30 100.0 37 .............................. ATAGGGCTACAGCCATACTTGACAGCTACATGCACCG 403604 30 100.0 37 .............................. CGCTAAGATGCGTGACGACCATTGTGCGGTCATTCTG 403537 30 100.0 37 .............................. ATGGGGCCTGTTCCGGTAACCCTGGTCCCGGCGGGTG 403470 30 100.0 37 .............................. CGATACCGCCGCCTCAAGAGCGGCCTCGTCAACGACA 403403 30 100.0 37 .............................. CGATACCGCCGCCTCAAGAGCGGCCTCGTCAACGACA 403336 30 100.0 36 .............................. AATAACCCCAAAAAAATATACGCCTCTTCGGCGTAA 403270 30 100.0 37 .............................. CGGAACTGACTGATCCACAGAAACAGCCGTTAATTGA 403203 30 100.0 37 .............................. CCCTCGCGTTCACTATAGTCGCCGTATATTATCGCAA 403136 30 100.0 36 .............................. GCGTGTCGCAGGATGATGCTGGCCGCGGCGGCCAGC 403070 30 100.0 39 .............................. TGGGCAATGTCTTCGGCTACCAAGCGCAGGGTATCGTTC 403001 30 100.0 35 .............................. CTCTGGCCAACATGCCGGCCCTGGTTGGCGGTAAG 402936 30 100.0 35 .............................. CTGGAACATCAGTCGCCATTGCAGGCCCTCTATAC 402871 30 100.0 36 .............................. CCCGGCCTTTTTTGATTTAGGGGTGAGAAGATGAAA 402805 30 100.0 36 .............................. CCAGAAGTAATAATCCCAATGCTTCCGGGGTTCGCC 402739 30 100.0 35 .............................. ACAAGTAACTAACAAAAGCCGTAAAAACCTAATAA 402674 30 100.0 37 .............................. TACAGTTAAGCCCGGAGATACTCTTTGGGCGATAGCT 402607 30 100.0 38 .............................. TCAATAAATCCGCACTCTGCCAGAACGGCAGGGGCTTT 402539 30 100.0 37 .............................. TATTTTTGCAAACGATTAGCCTAAAATTAGCCCATAA 402472 30 96.7 0 ............................T. | ========== ====== ====== ====== ============================== ======================================= ================== 26 30 99.9 36 GTTCGCAGCCTACCTATGAGGAATTGAAAC # Left flank : GGCAGAGTTTCAGACATTCCACCCTGCAGGCACCTGATGGAAAAAAGAAGACATATTACTATCATCCTATAGAAAAAAATTCCGCCAGCAGATAAAAAATAATCTTCTCAAGAAGGCTGCAGTCCTGGGAATAAACTTGCCGCCGGATATACCCCTAGAATTACATAACGTAAAGGGGAGCGACATGAAAGTAGTTTATTATAAGGATACAGTAATCAAAGGCTGGTTGGGTAAATATATGCTAACAGGTGATCTGCAGTTAATTCGCCTGGTCTTTAGTGTGGGTATCGGCGCCAAAAATTCCCAGGGTTTTGGTATGCTGGAACCTGTAATTTAAGCAGGAAAAATGTCGTCGACCTTGAATAATGTAAAAATCCCTGGGGATCGACGACAGTGAAGATATCAAAAAATCCTTGAATTTACTGTATCCTTTACTTTAGATTAAGTTTTTGCTGGAAATATGCTATAATAAAAAAGCAGCCAAACTAGTATATAAATGG # Right flank : CCTCTACAGCAGTATATATCTGCTCGCTGCTATATCTCGTTCGCAGCCTACAACAAATAGCCACAGTACGCGAGCGCCTCATGAAAGAGCTTTATGGTGAGAACCAAAGTCCATTTAGTCAATAATCAGGTCCACAAATTTAAACTCCAGGGTGTCCACCAGGCCGCGGTTGGTCAGGCGCAGTTCCGGGAGGACCGGCAGAGAGAGGAGGGCCATGGTCATAAAAGGCGATACCAGGCGGCAGCCCAGCTCCTGCCAGGCCCGCTGGACGGCGGTAAGCTCTCCGGCTACTTCTTCCACCGGCCGGTCTGACATGAGCCCGGCGATGGGCAGAGGCAGGAGGGCCAGGATTTTGCCGTCCCGAACGGCTACCATACCGCCGCCGCACTGGGCCAGGGTATTACCGGCCAGGGCCATGTCGGCATCGTTCATGCCGACAATGAGGAGATTGTGACTGTCGTGGGCGACCGTGGAAGCGACGGCCCCGCCTTGAAAGCCGA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCAGCCTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.20,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : NA // Array 2 682394-681407 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJKO01000001.1 Moorella sp. E306M sequence1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================================================================================================================================================================================== ================== 682393 37 89.2 194 ....T......A....T...........A........ GGTAAGGATTGAGCCAAAGATGGTGTGCGCGAAACCCCAGTGGAGCTACAAAATCCGGATGTTTCGCGATGCGGCATTTTTATGGACGGCCCGGGCAGTTACAGGAGCCCAGGCTGGTCAAAAAACGCCCGGGCCGCTAGGTTCGCGCTGGGTGGCCGCTAAAGCCGTCCAGAAAAAGAACTTTTGCGCGGTCT C [682391] 682161 37 100.0 35 ..................................... ACAAGCAGGCTGGAATAGTCCTGCACTCCTTCCGT 682089 37 100.0 33 ..................................... GAGCGACCCAGGATAGCCGGGATAGTGAGCCCG 682019 37 100.0 33 ..................................... GAGCGACCCAGGATAGCCGGGATAGTGAGCCCG 681949 37 100.0 34 ..................................... TTCATTACTTGTAAGACAGCGCGAATAGTAGTAC 681878 37 100.0 36 ..................................... GCTTCTGCTTGCGTTTTGGCGTAATTTCGTCTAGCT 681805 37 100.0 37 ..................................... CATTGGTGTAGCAGGGAGGATTTGAACCTCCACCCTC 681731 37 100.0 34 ..................................... ACTTTGACAGTAAACCCCCTTCAGACATAATAGC 681660 37 100.0 34 ..................................... AGACTGTTGCGCCCTGGCAACATGACTTCACCCC 681589 37 100.0 35 ..................................... CTGCGCTGTCTCGTCCGGCCTGTCCTGCCAGCTGT 681517 37 100.0 37 ..................................... GGTTAGCAACCCTTGCTTAGACTCCCCAAACACAGGT 681443 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ================================================================================================================================================================================================== ================== 12 37 99.1 49 GTTGCACCCGGCTTCCATGCCGGGTGAGGATTGAAAC # Left flank : CCTTACCGATCAGGCCCGCCGAACCTTTTTGGAGGCCTATCAGAAAAGGAAACAGGAAGAACTCATCCATCCTTTGTTAGGTCAACGGATACCCGTCGGGCTTCTTCCCCACATCCAGGCGCGCCTGCTGGCGCGACATCTTCGCCAGGATGCGGCCGAATATGCGCCGTTTGTTGCCCGATGAAGCGGATGGACATCATCGTTGCTTACGATGTAAATATGGAAAGCAAAGAAGGGCAGGCCCGCCTGCGGAAGGTGGCCACTATTTGCAAGAACTTTGGCCAACGGGTCCAGTATTCTCTTTTTGAATGCCGGGTAACACCGGCCCAGCTTGAAGAACTCATTTACAGCCTCCGGAAAGTCATTGATGAGAAACGAGACAGCCTCCGCATCTACATATTGCATGGCGGCCGGGAGGGTTCCCTCAGGGTTTACGGCCAGGACCGGTATGTGGACTTCGATGGGCCGCTGATTCTGTGAAGGCCCTGGCGGGACGTTGC # Right flank : ATTTTTAAGGAGGATTATCCCCTATACTTGCGATTGGTGCCAAGGTGGGTTGTATTTGACGCTTTCTGGGAAGCTGTTTCTGCCTTTCACTAGCTCCAGAAGGTTGCGGGAACCATTTCCGATTTAGGCCAGGAACACAGGACGAGGCAAGAATGGAGCCGGTGATGGCCGCTTTACGAGAATTGTCCTGTCGGCCGGAAATTCAGGTTTTAGACCCCGGCAGTCACTGCGTGGTTCTTCGGGAATGGCTGGCTAAGAGACCGGATGTGGAAGCGGTTTACTCCAACCGCAGCGACGGTACCTTTATTTTCTCGCAGCCGCCAGCCGCCCTGGCCAACGCCCGGATCCGTCCCTGGTGGCAGAGGGCCATGGCCGGGGAAGAGTATATATCAACGGTGTATGTGTCAGCTATTACCCGGAAACCCTGTCGCACCCTGTCTTTGCCTATACGGGACGGCAGCGGCAGGATCGTTGGCGTGCTGGCAGCCGATGTTTCGCTG # Questionable array : NO Score: 4.75 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:-1.45, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCACCCGGCTTCCATGCCGGGTGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-14.10,-14.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.05,4.87 Confidence: MEDIUM] # Array family : NA // Array 3 2005764-2006191 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJKO01000001.1 Moorella sp. E306M sequence1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 2005764 30 96.7 36 .............................T TAGCCGATTGGGAGATGCGTCTTGAAATCCCTCAGG 2005830 30 100.0 37 .............................. ACGTCAAATACTTTGATTAAGCCCGCTAGGCCAGTAC 2005897 30 100.0 37 .............................. GCGGGCGTAAATGTAAGGGACACCTAATAGGTTACAG 2005964 30 100.0 37 .............................. CCGGTAGGTTATACTTACCGCAAGATTATCGCTTATA 2006031 30 100.0 36 .............................. ACTTCCCGGCCACCGCGCCAGGGTCAGGTAAACCGT 2006097 30 100.0 35 .............................. AGGAAGTCCTGCAAACCCTGTGTCGGATCATACGC 2006162 30 86.7 0 .............T............T.TT | ========== ====== ====== ====== ============================== ===================================== ================== 7 30 97.6 36 GTTTTTGACCCGACTATAGGGGACGGAAAC # Left flank : GGCAAATGGGAGTTCCCCGGGGGTAAAGTAGAGCCAAAGGAAAAACCTAAAGACTGCCTGATCCGCGAGCTAAAAGAAGAGCTGGGGATAGAAGTAGAGGTAATAGATATTTTTCACGCCTTCACTTATCAGTATCCCTGGGGTAAAATGCAATTTATAGCCTATTTGGCCAGGCTGACACCAGCCTCTAGAGAACCGGAAGCCATAGAATGCGAAGACTACCGCTGGGTGCCAATCAAAGATTTGCCAGAGTACGATTTTGTCCCGGCGGATTGGGAGATAGTAGGCGAGCTGTTAAAACTGATCGCTATTCATTGATGTGAGGGAACAGGTTCTAGCGCCAGGATATCTCCAGGGCAAACTTAAAACAAGCATTCTTCTTTGCTGAATTATTAATTTGTCGTCGAACTCCAAGGATTTTTACCTTATTGGAGGTCGACGACAAAAATGAAGCCTGTCGATCCTTGGAAGCCCTGTGATTCCTAACTTTCTTAATGGGG # Right flank : TGCAAAAGACAAGCAGGAATCAGCAAGAAAATGGCGAAACAAAACAGAAAGAAAATTATTCCAAGGGAAATTCAGGTATTGGAGTTTTCGCTGTGTGGCAGGATTTAAAAATTCTCGATTTGGAAGTAACCCTGGTGGCGGAAGATGAGCTCAGGCTGCCCTTTTTTCGTGAAAACGCCCTGCGGGTAGGCCTGGGGACCTCTTTTCGCCAGACGGTATGCATCAATAAAAAACAAGAGGCCTGCCAGGGCTGTGCCCTGGAGGGCCTCTGCGCTTACAGCAAAATATTTGCAGTGCCTTCATATCCCTATATAAGTTTTTTTAACCCTGATACTTTAGCGATATTATCCCCCGGCACTCCTTTTAAGTTAAACCTGCGCCTTTTCGGGCCAGCGGTGGCCTGCTTCCCATATTTTTATTTCAGCCTAGAAAACCTGGCTGGCCGGGGTATCGGCTTGCGCAATAGCGCCGGCAAACGAGGGCGTTTTATCTTGCAAGAA # Questionable array : NO Score: 3.14 # Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGACCCGACTATAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.60,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0.27 Confidence: MEDIUM] # Array family : NA // Array 4 2014630-2014865 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJKO01000001.1 Moorella sp. E306M sequence1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 2014630 30 100.0 40 .............................. TCCGAAATCCCAGGAACCTGGGCATTGAGCTATTCCGGGG 2014700 30 100.0 38 .............................. CCTGTTGACGCGTCGATCTGTTGCCTGTCTGTTGACGT 2014768 30 100.0 38 .............................. GGCTTCTTCCACTTTATATTCCCTCCCTTCCTAGATAT 2014836 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================== ================== 4 30 100.0 39 GTTTTTGACCCGACTATAGGGGACGGAAAT # Left flank : TGGTATATTAACCTCCCGGGGTTTCACTTTCAGGAGTCAGCGCCAGGTAATGTTAAATTTACACCTGGCCACTGAGCTTTTGCAGAAGGATTTGCAGGACAGGGAGTTTAATAAAATTATGCAGGTGCCCATTAAGGCCCAGAGGAGTAATTCCGTGCAGGAGATGCAATTGGCTGAGCTTCTTGATGAACTGCGTACGAAAAGGAATAACTCCCTGGTCGCGCACGGCATGAGGCCGGTGAGCCAGGAAGACGCCATAAACGGCCTGGAAGCAGCCAGGACGATTTTAACCCTGGTTTTAGCCAGGGGAAACGAGCTTTTAGCCACATATCCATTGCAGGAAGAAAACATTAGGCTGTTAGTGAAACTGCTTGCTGACAGCTAGCGGCTGCTGGCTAAATGTCGTCGATCTCCAGGGATTTTTACATTATTGGAGGTCGACGACAAAAATGAAGCCTGTGGATCCTTGGAAGCCTTGTGATACCTAACTTTTTTGATGG # Right flank : TCGAGAATAAAATAGGCCGCCCTACGCGGCCTTTTTTTGTGCGCCCGGCATGGGCGTTAACTTAGTGGTGAAAGTCCACTGCAGGCGAGGCAGCACGAGTCTGCTAGCCAAAGGCAAGGGTGCCCATCGCGAGGTGGGATCTGAAGGAAGCCGGAGGCAAAGCCACGGCCCGATGAACAAGAACCCCATAGGAGGCTAGACCATCCGGATGAGCTGGCGAAACACAGCGAAATCCCAGGCTGCCAAGGGATGGTAGAGTATATGGGGCGGGCGCGGGGCGAAGGTTAACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGGGCCTCATGAGCTTAAC # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGACCCGACTATAGGGGACGGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.60,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [58.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA // Array 5 2015469-2016437 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJKO01000001.1 Moorella sp. E306M sequence1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================== ================== 2015469 29 100.0 36 ............................. TCCAGCGCCCCGCCTTTTTTTCTTGCCACCTTTCCT 2015534 29 100.0 38 ............................. TTCGGGCGGTTCATGTATGGTTCCTCCTCTCGTATGTA 2015601 29 100.0 38 ............................. TTATAAACTGGGCCATGGAGGTGCCCGGCGTGGGGGGA 2015668 29 100.0 39 ............................. TTTTCCGCAATCTCAAGCACTCAATTGACACCCAGGGCC 2015736 29 100.0 40 ............................. CGCTTATCTATATATGCACCAGAAACTTCGCCATCCTCAT 2015805 29 100.0 37 ............................. TCTATACCACTTCCGTAATACTTGGCCGTAAAGCTCG 2015871 29 100.0 39 ............................. TCGCTGGAACAGGCGCTACTGCTTGTACTGTTTATACGC 2015939 29 100.0 38 ............................. TGTAGCCTGCCTGGCGGTATCTGGGCAAAAGCACCTTT 2016006 29 100.0 37 ............................. TGATGAGGCGGAACGCGATAAACACTGAACTCATTTC 2016072 29 100.0 39 ............................. TTTTTTGCCGGGATAGGCTCCCGGCGGGCCGATCTATCA 2016140 29 100.0 38 ............................. TGCTTCCTCGGCGTCGAGGCCGAGAACCTCAAGGCAGA 2016207 29 100.0 37 ............................. TCAGTAAAAGCAGTGTTAGAAGCTATTTATTTAACTA 2016273 29 100.0 38 ............................. CGTGACCGCCCACTGGCGGCCGCCAAGGGAGACATATC 2016340 29 100.0 40 ............................. CGCTTATCTATATATGCACCAGAAACTTCGCCATCCTCAT 2016409 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ======================================== ================== 15 29 100.0 38 GTTTTTGACCCGACTATAGGGGACGGAAA # Left flank : TAGCCAAAGGCAAGGGTGCCCATCGCGAGGTGGGATCTGAAGGAAGCCGGAGGCAAAGCCACGGCCCGATGAACAAGAACCCCATAGGAGGCTAGACCATCCGGATGAGCTGGCGAAACACAGCGAAATCCCAGGCTGCCAAGGGATGGTAGAGTATATGGGGCGGGCGCGGGGCGAAGGTTAACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGGGCCTCATGAGCTTAACCGAACGCTATCTCAGTCTTCGTCAAGCTTGGTGAACCGCCGGATGCGGACCCGCATGTCCGGTGGTGTGAGGGGACGGGGGCTAGCCGCCCCCTCCTACTCGAT # Right flank : AGCCGGGACGGAGAATGAGACAGCCCTGGCAAAGATATCTATCACTTTCCACCAGGGTTGATTACCTATCATAATAAAAACCGCCAGGATAACCGCCCGGCGGTTTTTAAAGCCTTCCATTAGGCAGGCGTGTTTCCAGAGAGAGATTCCTTTTACGCCGGAAATAAGCAGGAAAATTTGAAATAAGGACGAATTGGAATAGTGAAATAAGGTGATATAATGAGCTTTAACCCCGGCCTCCGACCAGGCGAAATAATCGATAACCAACGCCTAACAGAGATTTTTCGCTGTAGTCGCCAGGGTGGCATGCGGCGGTCACACCAAACCAATACCTTGGTCATAGTGTCCGATCATACCCGCTCCCTCTATGAAGACCGTTGGATAGGCAATACATTCCACTATACTGGCATGGGCCAGCGGGGTGATCAGGACTTAAATTTCATGCAGAATAAAACCCTGGCCGAATCACGCCACAACGGGGTGGATGTCCACCTTTTTGA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGACCCGACTATAGGGGACGGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.72%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.60,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [28.3-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA //