Array 1 28010-22819 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJDV010000026.1 Shewanella sp. SR44-3 NODE_26_length_49830_cov_8.5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 28009 28 100.0 32 ............................ TTGTTGTTGAGTGGTTACGGCTCGCTTCTTGC 27949 28 100.0 32 ............................ TGCACCTGTAGACTGAGCCGCTCGGCCCAGTT 27889 28 100.0 32 ............................ ATTCTTGCAATGTTAAACCAGCTGAAATTTAT 27829 28 100.0 32 ............................ ATCGGCATGAAGCAGGCGCAAGAGTTTGTATA 27769 28 100.0 32 ............................ AGTGATACAATCGTACTCTTCCATTCTTGCAA 27709 28 100.0 32 ............................ CTGTAAAATCGGTGAATTCAGTTAGGCTTGGA 27649 28 100.0 32 ............................ GTCAGCGCCGATAACCCGAATCACTTTTACTC 27589 28 100.0 32 ............................ CAGTCAAAAAACATAGGCGTCCATGTATACAT 27529 28 100.0 32 ............................ GCTAATAAGCCACACGCCATCATTATCTAGCC 27469 28 100.0 32 ............................ ATCAGCAAAAACAGCTGATTCGACAATCTGAT 27409 28 100.0 32 ............................ AGTCCCAGCCGCCGGCTGGAATTGGAATGGCA 27349 28 100.0 32 ............................ TAGACAACGGCGTGGTGTTAGTGGCTCGCCGT 27289 28 100.0 32 ............................ AGTGGCAACGCCTAGGCACTCAATAGCCTGAT 27229 28 100.0 32 ............................ ATGGCGGCGGCCCTTAGCATCTGCTCTAACTC 27169 28 100.0 32 ............................ AACCACCGCTTGAATACGGGCGTCAACTTGGG 27109 28 100.0 32 ............................ TTTAAAGAAGGTAATCGGGCAGTGGGGTGCTT 27049 28 100.0 32 ............................ TAGGGTTTATTCAGAGTCAAGAAACGGTTATA 26989 28 100.0 32 ............................ TTACACCATGAGTTATTTAGCGTCAACTATTA 26929 28 100.0 32 ............................ GCTAAATGTGACATCTGCTGGCTGCATCCTGT 26869 28 100.0 32 ............................ TAGCCTCAATATTGTTTGTGTATGGCACAATG 26809 28 100.0 32 ............................ TTCTGCGGGAACAGTAACTTACACACAATCCC 26749 28 96.4 32 C........................... TAGGCGTTGCTACGGCAAGTAGGTCAGCTGAT 26689 28 100.0 32 ............................ AGATTGGCAAGAAGGCGTTAGATCGAGTTGAT 26629 28 100.0 32 ............................ ATTAGCAACTTCTCCTGTTATGAAATATCTTT 26569 28 100.0 32 ............................ TTGCCGGCGGTGCACTGCTCTCGACCTGCCCA 26509 28 100.0 32 ............................ TGTTGAGAGAACGGTTCACCAAAGAACTCTTC 26449 28 100.0 32 ............................ AGATGGTGCGGACAGTTTTATAGCTACAGACT 26389 28 100.0 32 ............................ TTTTGCCAGTTACCAATGACGCAGGCGAAACC 26329 28 100.0 32 ............................ AATCACCGTTAGGCTTTATAATTAGCGGCATG 26269 28 100.0 32 ............................ TGCAATGTATATTCTTGGTTTCATTATCGCTT 26209 28 100.0 32 ............................ AGCGTAGAATCCACCAACAGATTGAACCCCCA 26149 28 100.0 32 ............................ AATATCATTGCGCTTAACGTGAAGCATAAAGA 26089 28 100.0 32 ............................ CAATCCAGTGCCATCGGTTACAGTGGTAACGC 26029 28 100.0 32 ............................ ATGCTAACAGCGATTTGCGCGGTAACGCCTGC 25969 28 100.0 32 ............................ ATACGCAAACGCCGCGCCCGTTCCATCATCTT 25909 28 100.0 32 ............................ TGACCACCATCCTGCTGCCCACTAGGTCGTAT 25849 28 100.0 32 ............................ TTGAGGCAACACCTGTATGGTAAAGGTTACAT 25789 28 100.0 32 ............................ TTCATTGCGCCCGTCATTAACAGGGTAGCAAG 25729 28 100.0 32 ............................ GTGTCAGGAATGCTCGATTCATCAGCATTATC 25669 28 100.0 32 ............................ AGCAGGAAACCCAATTAAGACTCAACCGCTAA 25609 28 100.0 32 ............................ ATTGAAGAGCATACAAAGCAGTTGTATTTGAT 25549 28 100.0 32 ............................ ATCAGTACCAATGGTCGCGGTCGCAGCAGTAA 25489 28 100.0 32 ............................ TTTAAGCTTGGCCGTCTGCTGTGGGTTATTGA 25429 28 100.0 33 ............................ CAAGCAAAAAATAGGCGGCGACTGGTGGCTGGC 25368 28 100.0 32 ............................ AGATCGTGTTGGGAATGACCCCATGTATATAT 25308 28 100.0 32 ............................ AATGACATGACGCCTTATCAGATTTGGTGCTT 25248 28 100.0 32 ............................ GACAAAGAAAAGGCGGTTGATGCTGCTTTAAG 25188 28 100.0 32 ............................ TTTGGTTATTGCATAGAGGAATACACGGGTTT 25128 28 100.0 32 ............................ TATGACTTCTTTGGCGCCTCATTCTTTGGTGA 25068 28 100.0 32 ............................ ACCTAGATGGTCAGCGTAGGGTTTTGCGAAAG 25008 28 100.0 32 ............................ AAGTGGTGCGGAATGCTTGAAAGGTGTTATTC 24948 28 100.0 32 ............................ TGGTTGGCAAGAGTATTGGTATGAGCTATTTA 24888 28 100.0 32 ............................ TGCATAGCCATAGCTGCAAAGTGTTCGCGCTT 24828 28 100.0 32 ............................ ACTTGAAGGCACGTAACCGATTTTGGTTTTGC 24768 28 100.0 32 ............................ TCCCCGTGATTGCATCAAACAACCTGTGAGCC 24708 28 100.0 32 ............................ TAGAATAATGAGCATTGAAACTGCATTAATTT 24648 28 100.0 32 ............................ ATTCGTAGGCGATATGCTGACAATTGGCAAAA 24588 28 100.0 32 ............................ TATATGATGCGGTGTTGAGATCTTATTTTATT 24528 28 100.0 32 ............................ CTAGACACCAAGCTGGTACATGCCACCAAGGA 24468 28 100.0 32 ............................ GCTGGTCTGCACGGTTCGCCCTTGGGATGCCA 24408 28 100.0 32 ............................ AGACGAGATCATGAGGTGCAGGGCTGGATTTA 24348 28 100.0 32 ............................ CAACTTCTATTGCATTTTCGCTGTAAAAATAG 24288 28 100.0 33 ............................ ATTTGGATATTCAGGTTCATAAAATGATTCTAT 24227 28 96.4 32 ......................T..... GTTAACACCTTCCAACTTATATACAGCAGAGA 24167 28 96.4 32 ......................T..... ATAACTAACCAATCTTTCACCAACTTGCTCAG 24107 28 96.4 32 ......................T..... TGAACATGATTGGTCCATTGCCACGCCGTTAG 24047 28 96.4 32 ......................T..... TTTTTCATGCCTTCAGACCATCCAAAATCAAT 23987 28 96.4 32 ......................T..... TGCTTACATCACCGTTGCTAACGGTGGTGGCG 23927 28 96.4 32 ......................T..... TGACAATATAAACTATCGCGATGTCCCACAAG 23867 28 96.4 32 ......................T..... TTTGCAAAGGTTTGATTAACCGATTTTAAGTA 23807 28 96.4 32 ......................T..... TACAAGGAATTGGGATAACACCGAGCGAAGCC 23747 28 96.4 32 ......................T..... TAATCCCGCCATTGTGGCAGAATAGAGCTTGA 23687 28 100.0 32 ............................ AAAACAGCACCTGGTAACAATTCAGGATACTC 23627 28 100.0 32 ............................ GATAATCACCAATCGCACCAAATACCTTTACA 23567 28 100.0 33 ............................ GATATTGTCATGCGCACCAACAGCGTTTGGATC 23506 28 100.0 32 ............................ ATGTATTGCGCTTGTGTTAAGTCGTCTGGTAA 23446 28 100.0 32 ............................ ATTGCGTGAACCGTTTCCACAGTTGCTATTGC 23386 28 100.0 32 ............................ TCGCATAGTGATAGTCACGCTGGTGGCCGATG 23326 28 100.0 32 ............................ ATCAAAGCCTCCCAGATATTCAGCATATCCTC 23266 28 100.0 32 ............................ ATGTAGGTCAGAGTATTAATGCTGATAGTGAA 23206 28 100.0 32 ............................ GCCCAGCGGGATGGTGAATCGCTGACTTGGTA 23146 28 100.0 32 ............................ AATATCGTTAATCGCCCTCTTTCGAAGGCGGC 23086 28 100.0 32 ............................ CTTAAAGAAGTAACTACTTAATGTGATTGCAG 23026 28 100.0 32 ............................ AATTGATACTGGGTTAGTTTACAGCGAATATG 22966 28 100.0 32 ............................ GGTCGAACAGCAAAAATGCACCAAGACGGCGT 22906 28 100.0 32 ............................ GTTAGCAACAGTGATGTAAGCAGGAAGGTTGG 22846 28 89.3 0 .........................GTG | ========== ====== ====== ====== ============================ ================================= ================== 87 28 99.5 32 GTTCACTGCCGCACAGGCAGCTCAGAAA # Left flank : TACTCGAAAACAGGTTAAATCGACCGAGCGCATTGAGCGGGAAATGCACCAAAAAGCCCAGCGTTGGTCGGTAAAAAGTGGCAAGCCTTTAACTGAATGTTTAAAGGATCTTGAAAAGACCAAACCGACAGGGCATAGCGAGCTGCCGTTTATCTTTTTACACAGCCAAGAAACTAAGCGCCGATCGCCCAATGAAAGCAGTAAGTTCCCATTGTTTATAAGCAGTGTGACAGTTGATGGTAAACAAGGCGTTAAGCAAAACGGTAGTTTTGACTGTTATGGACTGAGTTCGAAAGTAAATCGTGAGGATAACTTAGGGTGCGTGCCGCAGTTTTAACCCCTAGTAATCACCAATAAAGGATGGTTTTAACCCTTTATTTTTGCTCTTTAAAAATTAGCTATTTAAACAATAAGTTACAGCAGGTCGTTTTTAACAAGGTTAAAAGAGGGTTTTTAACCTAACAACTTGTTGTAACTTATTTTATTGGCTGTATTCTATA # Right flank : ACGAGGAACCGAAACGGAGTTTCGCAGTTCGAGGAAGTGAGGTCATGGATGACCGATGTGAACAGGCTCCATGGATGGATTGTCATGGCAGAATGAACCATGACTCAAGTTCACTGCCGCACACGACTGCATGGATGCAGAAGTTAGGGCGACGCAGGACGCTAAAGCCGAGGCAGCTCAGTACAGGTTACTGGTATTAGTGTTGTCATTTTAACGGTTTAATCTAGAATGACTGATGTTTTTGTTTCACAAGAGTGTGAAGTATATGATTTTTGTACCCATCTGCTTAATTTTTATAAATATTTATATAATAAGAGCCGCTTTTAAAAACAAAAGTTGGGCCATAGTGTTTTATGTGTTGGTTGAGTTGTATTTTGCTGTACTTGGCAGTACTACTTATATCTCTAAATTGAGCATGCAAGGATAGAGTGTTGTGGATATTAAAGTCATAAATGAAGAAGCCACTGAGCTTGTTGATATTTTGGTTGCCGGCGTGCGTC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //