Array 1 1192419-1192916 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAMNG020000001.1 Clostridium estertheticum strain FP4 1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1192419 36 100.0 30 .................................... CAATTGCTGTTAACTGATGTACACCTCTTT 1192485 36 100.0 30 .................................... ACTGCTATTAGAATTATATTATCATAATAG 1192551 36 100.0 30 .................................... ATATCAGATAATTTCATTCTTACCTCCTAT 1192617 36 100.0 30 .................................... ATGTTAACGTGCGCTTCTCTAAATCTTCTT 1192683 36 100.0 30 .................................... TCTTTATATGTTATGTTGTTTCTTGCATAT 1192749 36 100.0 30 .................................... TAAACTTATGGGAGTAAAAACTGATAGTAG 1192815 36 100.0 30 .................................... GAAGAAATAATGGCTGAAATAAGGAAACAA 1192881 36 86.1 0 ..............................CGG.TT | ========== ====== ====== ====== ==================================== ============================== ================== 8 36 98.3 30 GTTTTAGAGTTATGTTATTTTAGATGGTATTAAAAC # Left flank : CTCTAAAAATTTGATCATACATTTTTTTTGCCATTTGTAACACCACTCTCCTAATTTTATTATACTATTTTATTAGTACTAAGTGTTACAACTTTAGTATATCAGGTCAGAGTTAACAATTAAAGAGCTACTTAAAACAATTAATTTTAAATTTGATAGCAATTATTATGATAATCCTTTTGATAACATTATGGGCATATTTGATTTGGTATCTACTTTTAAATTATATAAAGTAATTATAGTAGTAAATGCAAAATGTTATTTTAAAGAAGAGGAATTAGAAGAAATATATAAAGCAGCTAAATATAGAAATATAAATCTTTTACTGATTGAGTCTATTATAGATGCACAATTGAAATATTTAGAAAATAAATTAAGTATTGATAATGATTATGATGAATTTATATTTAAAATGTAATATACTATAAGTATATTATATATCTCTAAACTGACAAGTTATTTTGTTATGAATTATTTATGCTTTAAAATGCTTATTTGAG # Right flank : TGCTACCCCTATTCTGGACATTCTCTAACGAATGCTAACTAATTCATAGATTCCCTTATAAATTGATTTGGACTTATATAATTTAAGCTCCCATGGATTCTTTCTTCATTATAGAATTTTATATATTCATCAATAAGTCTGTAGCCATCAGTGAAGTTTTTAATCTCATTCCAAGCTATACATTCCTTAGAAAGTAAGGAATGAAATGATTCTATATGTGCATTATAGTTAGGTGAATTTACAGGAATACGCTCATGATATATATTGTTCACCTTACATAATTGTTCAAACTTAATTGAAGTAAATTGTGGTCCATTATCACTTCTGAGAATTAAGTTTGAGGTAATTCATTCTCTGTAAGTGCCCTTTTTATTGCTATAATTGCATCATCAGTAGTGGCAGTTGTAGTTATTTCTCTACCAACAATTTTTCTAGAACAAACATCAATAATATCTGTAAGCATAATAAATTGCCCATTTAATGCCTTAACATATTTTATG # Questionable array : NO Score: 3.17 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGTTATGTTATTTTAGATGGTATTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:77.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA // Array 2 1209349-1210245 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAMNG020000001.1 Clostridium estertheticum strain FP4 1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 1209349 32 100.0 34 ................................ ATATTATTAACACCCCTGTACCGTATTATCTTAT 1209415 32 100.0 35 ................................ ATATTTGGCCAGTTCCATGTTTTTGTCTTCTCTAG 1209482 32 100.0 34 ................................ TTATAATAATCTGTCTCATATCCATCAGCGCTTA 1209548 32 100.0 35 ................................ CAACAAAGTCCTTTAGCTATACATTCGTTGATACA 1209615 32 100.0 34 ................................ ACTTAAACAAATAGTTAATGACCTAGGAATAAAT 1209681 32 100.0 35 ................................ TCCAGAACCTTTCACTGTATATTGCTTTGTAATAA 1209748 32 100.0 35 ................................ CATTTCATTACCTCCATTGACAACATTATGTCTTA 1209815 32 100.0 33 ................................ TTACATTTAGCACCGTGGCAGTAACTACTTTGT 1209880 32 100.0 34 ................................ CGAAATAATCCATGCCCTGTATACCAGAACATAG 1209946 32 100.0 35 ................................ ACTATGAAAATTACATTTATCTAAAATGCTATCAT 1210013 32 100.0 35 ................................ AGTTAAGCTTTTAGACAAATGTACGGAGTATGGAG 1210080 32 100.0 34 ................................ CAAGACATGGCGAAACAAAAGGAGTGATTATGAT 1210146 32 100.0 36 ................................ AGAATTAAGGTTAGCAAAACCTACAGGGGATGTAGG 1210214 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 14 32 100.0 35 GTCGCTCCCTATATGGGAGTGTGGATTGAAAT # Left flank : TTTGGATGGATATCCAACCTTTATGTGGAAGTAGGTGATAAAATGTTAGTATTAATAACCTATGATGTAAATACACAAACGCCACTTGGTAGGAAACGTCTGCGCCAGGTTGCAAAGCAATGTGTGAATTATGGTCAGCGTGTTCAAAATTCAGTGTTTGAGTGTGTACTAGATGCAGCTAAATGCCGCGAGGTTCAACATAAGCTTGAGCAGATTATTAATAAGGATACAGATAGTTTGCGGTTTTATTATTTAGGGAACAATTATAAAAGTAAGGTTGAGCATATAGGTGCAAAGGAATCCTTTGACGTTGAGGGTACACTTATAATTTAGTGCGGATATTTAGCAAACATAAAATGCTGGAGCTTTCGCACCGTGAATATAATAGAAATCTCTTATAAAAAATAAAATATTTGATGGGAGCTGGTTGCTTGGGTATTAAAAATGTAAAATTCACTTATAAACTCAATGAAATTAACAGTTTTTAGGTGAATTTTGCT # Right flank : TACAGTACATCACTATGTGCTAAGATAGTTGTCGTAGAGAGAAATATAGTATACTATACAGTATAGACTTTACGAGAGAAGTCTCTTACTCTGAATCATTATTTAAAATTGAAATCGGATTATGAAAAAAACAAGATTGGTACACAAATTATTTTGGGGATTTAACGGATTCCAGAAACAGCAAAAAAGATGTTACTATTAATTGTCTTTTGTGTATGCGTGAAGATATTACATCATTGGCTTTGCAAAAATTAGTATACTACGTTCAGGGGTTTTACTATGCTTTTACGAATCGTCTTATTTTTGAAGAAAACTGTGAAGCTTGGGTACATGGCCCTGTTTACAGAAATGTATATATTAAGTATAGGAAATATAGGTTCAATCCAATAGAATGCATTTGGGGGAGATGTGTATCAAAGGACAAGTTACGCTGAATATAGCTAAAAATCTACTAGAGATTATCCGTACTTACCACATCATTTTCCCGTTTTAGAAGGAAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTATATGGGAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.70,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [78.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : NA //