Array 1 3383-3830 **** Predicted by CRISPRDetect 2.4 *** >NZ_NVYB01000043.1 Vibrio navarrensis strain WAPHLVBRA00023 NODE_43_length_9498_cov_15.2587, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 3383 28 100.0 32 ............................ GAATTGGGATGAGGATAAATTTGGTTCTAGTC 3443 28 100.0 32 ............................ ATGCTGGGCGGCGAGTTTCCCGTTCGCCGCTT 3503 28 100.0 32 ............................ AGCGACGACCAAGTACATGGGCTTGCCTTTTT 3563 28 100.0 32 ............................ AGCGACGACCAAGTACATGGGCTTGCCTTTTT 3623 28 100.0 32 ............................ TGCTCGAGAAACTGATTCATCAATTGCTGATG 3683 28 100.0 32 ............................ ACAATGGCGGCACGTTCTTGCCAAGCATCAAT 3743 28 100.0 32 ............................ GGAAAAATAGAAAGTCTGTGGGGCAACGGCTT 3803 28 92.9 0 ......................C.A... | ========== ====== ====== ====== ============================ ================================ ================== 8 28 99.1 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : AAGGACAGGTTTTAAGTGGCAGATAGACTCAATTACTATAAATGACCCCGAGCTAGTGAAAATTTTCAACGACACTAAGAAGCAAATCAATTTCAAAAAATACCTTGTTCAGTTAGATTCTGGCTACCAGCTAAATGAAATAATCATACATGGTGGGGAATTTACTGATATAGACCGGTTATTACTTAAATTCAGCGTAGAAAAACTACTCAAGTATTTCGAGTCCCAAAAACCTAACAAACTGCTTAAGAGGGATTCGCAATGCGTGGCATTTTCAGCATGCGGTGAGTTTCGTGACTACGATAGTATGCGGTAGCTTTTGCAGTGCATTGCTCACCCCTTAGCAGGGCGTTAACTGGCAATGAAATTACCCATCTTTTTTGTTGAATCTTAACTTATTGATTTATATTAATAATAAATCGAGTGAAAAATAAAAGGTTATTTTGAGGAATTTGATGTAATTACTATTATTAACAATAGGTTACTGCTAAAGTTCCATA # Right flank : ATATTGGTAACTTTGGCATTTGGGATCAGCCAGTTAACAAAGCGTTCAAGAGGGACTTGGCACGCGTGGCATTTTCGGTTTGCAGTCTGTTTAGTGGTTAAGGCGTAATGCGGTCACTTTTGTAGTGCGTGCCAGCGCCCCTTAACGCGGCGTTAGCTTAAAACATTAAAAATCAATTGTTTGCTGCTTTTTCTTTCTTCCTTTAGCAATTCGTTCAGGTTTGTCGGCAAATCAGCATTGTTTGCTAACGCAAGTTTTGAGCATTGCCTCAATGGAGTTTTGGGGCTACACGAGGTTAGCCAGTTTGGCGTAAAGTCGCTTTGGAAGTTTGGCTTTCGCTTTGTGTTTTCTGAAAGTGTGTTATCAAAATTTATTGGCGTTCAAAGCAAATGAACAGTCACAAAGTTTGAATCAATTCGGGTTTTAAAACTCAAGTGTTTTGCTGGTTTTCCAAGTCAGGTTAACCTTGATTTTGGTAAATCTTAAGGTGCTGAAATTTA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 6409-5961 **** Predicted by CRISPRDetect 2.4 *** >NZ_NVYB01000042.1 Vibrio navarrensis strain WAPHLVBRA00023 NODE_42_length_10579_cov_37.2283, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 6408 28 100.0 32 ............................ CTTTTTGCCAAACCGGAGAAAGTCTGGGAGGT 6348 28 100.0 32 ............................ ATTCTGCCGTTCCGTGGTCTGCGCCCGTTTTC 6288 28 100.0 32 ............................ GTTGTAGGAGAGCGAGGCAAAACGCTGACAGG 6228 28 100.0 32 ............................ TCACTCACTGGCACGCGGCGAATCGAGAGATA 6168 28 100.0 32 ............................ TAACACGGTCAAGATTGACCCGTACTGCTGTT 6108 28 100.0 32 ............................ ATCATCAACGATGACGGTTTACGCCTATGGGG 6048 28 100.0 32 ............................ TATTCTTCGCGCATCCCACGCGCCAGCATAAG 5988 28 96.4 0 .......................G.... | ========== ====== ====== ====== ============================ ================================ ================== 8 28 99.5 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : GATGTAACTTACGTAAGCTTTGTACGCAAACAGGTGAAATCGCCCGAACGAATAGAACGGGATATGCAGCAAAAAGCTGTCCTATGGGCAGCAAAATCCGGCAAACCGCTGGTGGAATGTTTAGCGGATTTGCAACAAAGCAAGCCGACAGCATTGTGCTCTTTGCCGTTTATTTACTTGCATAGCCAGCAAACCAAGCAGCGCTCACCAGACAAAAACAGCAGGTTCCCGCTGTTTATTGAGATGCAGCAGCAAAGCACATCACAAGATGGGAGCTTCGATTGCTATGGTTTGAGTAGCAAAGCGAATGGGCAGTCAATGTTGGCTACCGTACCGCATTTTTAAAATGAACGAAAAAGGGTAGTTTTTACCCTTTATTTTTGCTCTTTAAAAATGTGCTTTAAATACAAATGGTTGCAATAGGTGGCTTTTAACAAGGTAAAAAGATGATTTTTACCCTAACAGCTTGTTGCAGCTTATTTTTATCGCTTTATTCTATT # Right flank : ACAAAAACGCCACGAGCAAAGCTGGTGGCGTTAACATCAATTCTAATCTAATCATAGCAATCGAGCATTTTAGATGCGCCCGTACCCCAAGTCGTACCCAGAGCGATTTTTGCTACAATTAAAAACCGTTTAAACCTTTATTTAATGCGCTCTAACATCACACCCGCTTCCATGTGGTGGGTGTAAGGGAACTGGTCAAACAGAGCGAAACGAGTAATGGTGTGGGTTTCGCTCAAGATTTCGAGGTTCTCGAGCAGGGTCTCTGGGTTGCACGAAATGTACAAAATGCGCTCATAGCCTTGCACCATTTTACAGGTGTCTACATCCATACCTGCGCGCGGAGGATCGACAAAAATGGTGTTGCAGCGGTAACTCTTAAGATCGATGCCATGGTCTTTAAGGCGACGGAATTCACGTTTGCCTTCCATCGCTTCGGTGAATTCTTCCGCTGACATACGGATGATCTGCACGTTCTCAATTTTGTTGGCGGCAATGTTGTA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //