Array 1 16053-18590 **** Predicted by CRISPRDetect 2.4 *** >NZ_AJMV01000063.1 Streptococcus parasanguinis F0449 contig00033, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 16053 36 100.0 30 .................................... AAGCGAATTTTTGTCAATCTTTCATAGGAT 16119 36 100.0 29 .................................... TCATAGGATATAAAGCAAAATAGTAATCG 16184 36 100.0 30 .................................... TGGAAACAATTCTTTCGAATAGCCATGCTC 16250 36 100.0 30 .................................... GAGAAATCTCATTTGGTCTAACATCTCTTC 16316 36 100.0 29 .................................... AAGGTAATAGATGATGAACTAGAGGCACT 16381 36 100.0 30 .................................... CACCCCTAGAAGATACACGAAAAGCCTATT 16447 36 100.0 30 .................................... TTCTTGGAACAACTTTTACTTTCAAATACG 16513 36 100.0 30 .................................... CGGTTTATAAAGAAATCTCTCGTGGATTGC 16579 36 100.0 30 .................................... TATTGTCCGTTGCGTACTCCCTCAATCATC 16645 36 100.0 30 .................................... GTGGTCTCATGTTATCACCTTTTAAAATAA 16711 36 100.0 30 .................................... TCTTTCACTTCATGATCTCTTTCAATTACT 16777 36 100.0 30 .................................... TAACAAACCCAGATGTGATTATCGACCAAT 16843 36 100.0 30 .................................... ATATTGACTATCTCGCAGCATACAACGAGG 16909 36 100.0 30 .................................... CTCTCTCGATTAAACCATCTATGCTCTTTA 16975 36 100.0 30 .................................... CTTATCAAATTTCCATAGTCCTAACTTTTT 17041 36 100.0 30 .................................... TGTCGCAGTTGGTTTATCCTCAAGATATAA 17107 36 100.0 30 .................................... CTGATTGCTCGGGCTCGATCTCGCAAGCGT 17173 36 100.0 30 .................................... ATCCCGCTTATGCCACCGGCTCCGGTCCTT 17239 36 100.0 30 .................................... CTCTGAAGACTATCGCAAATGAAACAATAG 17305 36 100.0 30 .................................... CAATTGCTCTAATCGCACAATTGATCAAGG 17371 36 100.0 29 .................................... CCATTTACCGCTAAACTTGTAAGTAGACA 17436 36 100.0 30 .................................... CAATTTCTTGTAATTCTCTTTGAAATTGTT 17502 36 100.0 30 .................................... TGATGGATTGGCAAGATGCTCATAGACCTT 17568 36 100.0 30 .................................... GCTGAGATCGCAATTCTGAGATCAAGTTTA 17634 36 100.0 29 .................................... AGTGATTGGTGACATCCATTTCCCAGTAG 17699 36 100.0 30 .................................... TTGTTATTGATTCAACTCGTATTCAGAAGA 17765 36 100.0 30 .................................... ATGCTGGAGAGGTGGCAACTGCCGAAGTTG 17831 36 100.0 30 .................................... TAATCAAGCCAAAAAGCCGGCAAACTCAAA 17897 36 100.0 30 .................................... CCAGTGTCGGTTCTCATGTCTCCGTTATCA 17963 36 100.0 30 .................................... ACAATGATGTGCTCGTCAATTCCGTGGTTG 18029 36 100.0 30 .................................... GTTGCTTCTCGTTCGTCTAATAGGCTATAT 18095 36 100.0 29 .................................... CTTCTCTTGATACGGTCGTGGCTACGACT 18160 36 100.0 30 .................................... ATTTCGTTGTAAGCCACCTCGAAGCAATCT 18226 36 100.0 30 .................................... GCTACACGTGAATCTTGGTTGAAACAGATG 18292 36 100.0 30 .................................... ATAGCTTGTTCAATCCCAGCCTCGAACGCT 18358 36 100.0 29 .................................... CATCCTTACGTCTGATGTTGTCGGATTCT 18423 36 100.0 30 .................................... TAATCATTTGAAGCAGGATCACCATGATGA 18489 36 94.4 30 ...............................TT... TGATGGTACCGATATATCATAGATTTGCTT 18555 36 77.8 0 A.C........T....T.....G......A..T..G | ========== ====== ====== ====== ==================================== ============================== ================== 39 36 99.3 30 GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Left flank : TGGATGATTACTTATCTTATAAGGAATTTGTTGAGTGTTGTGAACAATTAGAGCGATTAACCATTCACTGTAACATGTTATACACTATTTCATTTCCTTCAAATGAAGGTTTTCTTCATGTCACGAAAGAAGTATTAGAGGAGATTAATATTGTTTCAGATTACGTTGATCATTTTTATTCATTAGAATTTATGTACGAACGTTTTACTAATCAATATCCAATAAATCAAATACCTTGTAAACAAGAGTTTTTATCATCTTTAAGGAAAATTGGACCTTATTTATTTAGTTCGGACATTCTCCATATGAGCTTATCAATTGAGGATCAAGTAGCATTGAGAATATTAAATAATTTGTACCAGTATGAAATGAAAATAAAATTCCGTATTGAACCAGTTAACCCAATGTTATTGAAGTATTTAGAAGAATAGTATTGACGAGTTAAGTCTAAGACCTTATAATGGTTCTGAGCTACAAAAACCAAAATTGACGAATTTGAG # Right flank : GTAACATAAAAGTTTTTTATATCATAGTACCTATATAATACAATCCCCTCCACTTTTTCTTTGACTCTCCTTTCTTATTTTTCTAAAATAGTAGGTATGTGAAGGGAGATTGATATGAAAAAAGGTTTGGTAATTGTGCTTTCTGCTTTGGTCTTGGCTTCGTGTGGTCGTCCTCAGAGGACGGTGTCGCCTAAGAGTTCGGATACCAAGCAGACAAGCACTTCGGAAAAGAAACAGTCTGGCATGGATTTAAAAGCCATCAAGGCTAAGGACTACTCGAGTATCAAGGGAACTTGGATCGATGGTCGTGGCAATGAGCTGGTCTTTGATGACAAAGGCTTGGTCAGCGAGGATGTTGAGCTTGATGCATCGAGCTTTAAGCAGAAGGACCAGATTGCTGAGATGACGGTTAGTGCCAAGTCGGGTGTTGGAGGCTACGGTCTCTTGCTCCTTCCAAAAGGTCAGATAGCGGGCAAAGACGATGCTTCGGATAAGTCCAA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: F [matched GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //