Array 1 869502-874410 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP089094.1 Microcystis aeruginosa FACHB-905 = DIANCHI905 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================= ================== 869502 37 100.0 36 ..................................... AAAGAGGAAAAAGAAGAAATATTAACCCCTAGCAAT 869575 37 100.0 38 ..................................... ATATTCTTTTAAGACTTTCCGCGCTTTCGGTGAATCGA 869650 37 100.0 35 ..................................... ACCATCAACGGAACCGCAAGATCGATCGCTACCCC 869722 37 100.0 40 ..................................... CGCCGGAAGCTATGGGTGCTGATACCCTTAAATCCCAATC 869799 37 100.0 36 ..................................... TATCAAGGGGATTGAGGATAAATTAAATAAGGTAAG 869872 37 100.0 36 ..................................... GTTGTAATAATATAGTAAAGAAGGAATAACAACAGT 869945 37 100.0 37 ..................................... ATCAAACGCGGTCGATGCTCGATCAATGTCTTCTAAA 870019 37 100.0 36 ..................................... AATCGCACAATCAAAACCATAGCCGATCCTAATATT 870092 37 100.0 34 ..................................... TTTTAGGTGATTTTTTAGGTTGAGATTTAGGATT 870163 37 100.0 35 ..................................... CAAGATGCCGTTTATGGAAAAGGATTTTATCTGAC 870235 37 100.0 33 ..................................... ATAACACTCCTGAGCGCATCCGCCAAGCTGATG 870305 37 100.0 33 ..................................... CCACTAGGAAACTCAACAGAATCGCCTACTTTA 870375 37 100.0 34 ..................................... CAGAATCTCTCTCAGATAAGGAACCCGACTCGTT 870446 37 100.0 34 ..................................... TGGTAAATTATTTGCTAAACTTGTAGCTGATCTT 870517 37 100.0 35 ..................................... TCCCCGCCAGTGACATCCCGACAAGTGCAAGTAAA 870589 37 100.0 39 ..................................... TATTTCTGGAACCGACCAGAAATAGAATTCATCAGCCGC 870665 37 100.0 35 ..................................... ATCGATGGAATTGGGGATGCGATCGAAGACCCGGA 870737 37 100.0 36 ..................................... CTAAGTATTGGACTGCGGCCTTAGCACTCATCCCCA 870810 37 100.0 34 ..................................... TCGCTCCGAAATCTTTGGAGCCACAATTATCGGA 870881 37 100.0 36 ..................................... TTCACTAACCCATCGATATAGGCAATAAAATCAAGC 870954 37 100.0 34 ..................................... TTCCCGTATCCCGGTTCCCCCCAAAAAAGCCCTA 871025 37 100.0 36 ..................................... TCCGACGCACCGCCACCTCAGCCAAAGGAAGATCGG 871098 37 100.0 35 ..................................... GTATTTAAAGCCTTAGATTCTATAGATTCTATGGA 871170 37 100.0 35 ..................................... ATGCCCTTTGCATCGAAACAAACAAAACTCACTTA 871242 37 100.0 36 ..................................... CTCGACTGTTTTCACTACCTGAGCTTGGGCATTGCC 871315 37 100.0 34 ..................................... TTTTACAACTCTTTGCATGGCTTAAAACCTAAGC 871386 37 100.0 39 ..................................... ATCGGAGGTTTATCTGCTAAAAGATTTATAATCTTTATT 871462 37 100.0 34 ..................................... CTTTTTTTATCAGCATACGGGATGGGATATAGCC 871533 37 100.0 34 ..................................... CTCCTTTTGTGAAGGGATCAATTGATTCAAAGTG 871604 37 100.0 34 ..................................... ATCAATTTACTCCTTTTAAATATTAGCTTCTGCC 871675 37 100.0 35 ..................................... CTGTTCCTTTTCAATTGCCTATTCCTTCTCGTAAG 871747 37 100.0 40 ..................................... AGACAATAGCCCATGTCAATGTCATGTGTTATTACCGAAA 871824 37 100.0 35 ..................................... AAATCGTCAAACTAAGCGAAGAGAAGCAAATACTA 871896 37 100.0 34 ..................................... ATTGAATACGATCCCATTATTTAGTCCCTCAAAT 871967 37 100.0 34 ..................................... CTAATAAAAAAGGTATTCCAATGAGGCTACCGGC 872038 37 100.0 36 ..................................... CACCTCCGGTAACGGGTGAGTATATTGGAGCTTCTG 872111 37 100.0 35 ..................................... TTGATTGCTATCATCAAGGCATGAATGACAACCTT 872183 37 100.0 37 ..................................... AGTAATCAGTGAGTATTAAGGAGTGAGCAGTAAACAG 872257 37 100.0 37 ..................................... GGCCGGTGGGGGGGCGAGCGAGCCGCAGACTGCCCGC 872331 37 100.0 35 ..................................... AACTATTTCTAATTCTTTCCCCAATGTTAAACTGG 872403 37 100.0 34 ..................................... AAGTATGTGGGAGAATCATCTTTGAACGTTTGTA 872474 37 100.0 36 ..................................... ATGTAGGCATCTATTTGGGAGACGGTGAGTATATTC 872547 37 100.0 36 ..................................... AGTTGCTCAAAGTATTCTTCTTCAACATTCTGGGGA 872620 37 100.0 35 ..................................... GAATCAAAATCAAAGATGCCAAAACTTTCCCAAAA 872692 37 100.0 35 ..................................... GTGATTGAGGTGTAGGCAGTTCCCGCCCATCTAAC 872764 37 100.0 34 ..................................... AATCTTTGCCGCTCAACCCCCTAATAAGCTCCCT 872835 37 100.0 45 ..................................... ATGGCTTCGGCTCAAACCGGAAAGACAGAAGCGGCGCTGAATACG 872917 37 100.0 35 ..................................... AGGAGCAATATAGGCAATATTACCCCTGATATCAT 872989 37 100.0 36 ..................................... AGAGCATATTCGCTATTTTCGCTAGGGAATGTTAGG 873062 37 100.0 34 ..................................... TTGATTTGATAAATGGCGATTTCAATTTTCTCGA 873133 37 100.0 35 ..................................... TCGCCGGTAAAGCCTTCCTCTACTTTTTCAATAAA 873205 37 100.0 34 ..................................... GCGTCCCGGTTTCCCTTCTTTCCCGTCGCGTCCC 873276 37 100.0 34 ..................................... TCTCCTTGTTCCGCCAATTCCTGGCAGATTTCTT 873347 37 100.0 35 ..................................... GAAGAATTCAATAGGAAAATAAGGAAAATACGACA 873419 37 100.0 36 ..................................... CAAAATCGAGCTAGGCCGCCTCAGTGAGGCGCAAAT 873492 37 100.0 37 ..................................... AGCGGACAAATAAAGAGCGATCGCCTCATCGAGAATA 873566 37 100.0 37 ..................................... ATGTAAACTCCGAGCAACTGATTAACAAATCAAGCAC 873640 37 100.0 35 ..................................... TAGTTAAGTGGATTGTTACGGGAGGTAACATAATT 873712 37 100.0 39 ..................................... CCTTCCGGCCCGGAGACAAATCTGGAACCTATTTCGGAA 873788 37 100.0 38 ..................................... TAGCGGGGAAACTGGGATTACAATAAATTAAAGACATA 873863 37 100.0 33 ..................................... AACGGCTTTGTAGCTGGCTAGACAAGATTGATT 873933 37 100.0 35 ..................................... CACTTAATAGCCAATCAACAAGTTCAATCTGTCTT 874005 37 100.0 39 ..................................... AACGCTTGATTAGGGTTCCAGCCAGCGAAATTATTCACC 874081 37 100.0 36 ..................................... TAGAACAAGCGCAGTGTTGTCTTATCGAATTATATG 874154 37 100.0 34 ..................................... CTTTTTCTTCTAATTTCTGGAATACAGGATAAAA 874225 37 100.0 40 ..................................... ATAGCTAACCTGTTCTACTGGATTTTGAGGTTTATTTATG 874302 37 100.0 35 ..................................... GTCTGTTTACCATTCTTAAGATTTGGGAAGTTATC 874374 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ============================================= ================== 68 37 100.0 36 GTTCCAATTAATCTTAAACCCTATTAGGGATTGAAAC # Left flank : TTTGTTGTCAGTTACGATATTTCCGACGATAAGCGACGAACCAAAATTCACAATACGTTAAAGTCCTACGGCCAACGGGTGCAGTATAGTGTTTTTGAGTGCGATCTAACCGATACCCAGTACGCTAAGCTGCGCGGGCGCTTGAGTAAGTTGATCAAACCCGATACCGATAGCATCCGCTTTTATTTTCTCTGCGCCTGTTGTCGGGGTAAAGTGGAACGTATCGGTGGTGAGTTACCCCGGGATAATACGATTTTTTTTGTTTAGCTCGGTTGCGCCTCGGAATAGCTGTAAAAATCCTTAACTATTATCTGGTGGCTGGAAAGCTTATGCAATATAGATTCGAGATGATTTTCCTTTCTAACGCGGGGCGCACCTTATCCCGTAAGGTTTTGCGGGGTCTTGAAGAACTGGGTCACTTGCTGTACAATAGATTTATTGCGGGTGCGGCGCATACGAACCTTGAAAACCCCATAGCGTATAGCTTTTACCACTGGGCG # Right flank : CTGGAACTTGAAACCTTCTAGTCTATTAATTTCAAAATGAGAATTGCTGTCAGTGAGTTTATCGAACTGCTTGCGTCCAAAATATCCTATAAATTAGAGGAAGTATAAGCTAATTTGTATTGATAGTAAATCTGTTTTTAATAGTATGAGCAACTCTCAATCGCACGCTAAAAACCTTCTCCCTTGTTCCTTCTCCCCACTTCTCCATACCTATTACCTAGCATTATTAGTATTCTATAATACCAATGCTTAGGAAACTATAAAGAAAATCCCAAGATTAGGCGATTCCCTTGGCGAAAAAGGCTATAGTAGCATAAAATCCGTAATTTGATCCACAAAATTGTTATGACAGTTACCAATAGACAAGAGCTAGAAGAACTGATTCAACAGGTGAAAAAAGCTCAACAACAATTTGCCAACTATAGCCAAGAACAAGTAGATCTTATCTTCAAAAAAGCGGCATTAGCAGCCAACAACGCTCGCATTCCCCTGGCTAAAAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAATTAATCTTAAACCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.90,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [43.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.27 Confidence: HIGH] # Array family : NA // Array 2 1225082-1230968 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP089094.1 Microcystis aeruginosa FACHB-905 = DIANCHI905 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================================== ================== 1225082 36 100.0 41 .................................... GCGAGCTTCTAGTAAAGAACGGAAGTTAATTCTTTTATACT 1225159 36 100.0 37 .................................... AATTCAGCAACTTGGCTTTCAAGTTGGTTTACTTCTG 1225232 36 100.0 36 .................................... CATAAAATCGGGAGTGTTTTCCATGTTTTTAGAAAT 1225304 36 100.0 37 .................................... TGGCAAGTTACCCGGAGAGTGGTAATCTGTCCCTGAA 1225377 36 100.0 38 .................................... CAGAAAAAGAAAAACACATTGATCAGCTTAATGATAAT 1225451 36 100.0 42 .................................... CCATGATATTAAAGCAATCGCACCTCAAGGGGATAAATTAAC 1225529 36 100.0 45 .................................... AGTAAAGTCGCCAGACATAACGGGGACTTTGACAGAACTCTCTAC 1225610 36 100.0 35 .................................... ATTTAGCTTGACACGGTTTGAGTTTTGTGTTACCA 1225681 36 100.0 37 .................................... ACTAAGGCTCTTTTATGGATTTTTAGAGCGTCATATA 1225754 36 100.0 36 .................................... AAAATCATTAATGTTCTTTATCAATCTGGAATTTAT 1225826 36 100.0 38 .................................... AAATTCAGACTCTTCTTTTTGAGGCTCAAATCTGTTAT 1225900 36 100.0 41 .................................... GTCTATATAATTATGTCTTGTGGGAAACTTGGCAGTAAAAC 1225977 36 100.0 36 .................................... TTGAGGATCATAATCAATGTGTATCATTTGACCTTT 1226049 36 100.0 41 .................................... TACACAAAAATCGGAGCAAATAATAAAAGAATTAAATACAA 1226126 36 100.0 36 .................................... ACGAAGGCTATGTTACTACGTATTTCGACACTAACA 1226198 36 100.0 38 .................................... AAAATCGGGAGTGCTATTTTCCATGTTTTTAGAGTAAT 1226272 36 100.0 35 .................................... AGAGCGCATGCTAGAGGATGTGGCCCTGTATTTCC 1226343 36 100.0 41 .................................... TTTGGATTTTGATTTTGGTTTTGGTTCATGATTCTCCTTAT 1226420 36 100.0 42 .................................... ACGCCTTGCGTCATCTCACCAATCCAACGAATAGCGCTCCAA 1226498 36 100.0 36 .................................... TCCAGAAATTTGACCTCGACCCGTGAAGGTAGTTGG 1226570 36 100.0 41 .................................... TAAAAAACATCGATAGGTTCATGATTGATGCCAATTACCCC 1226647 36 100.0 37 .................................... GGATTTGAATGATTCGTACACCTTGATAAAATTTTGA 1226720 36 100.0 37 .................................... AACTCTTCATAACGCCCGTCTTGTTTTCGCCAATCAT 1226793 36 100.0 40 .................................... ATTAATGGCATCAGAGCAAGGAATTATTATAGACGAAAAA 1226869 36 100.0 42 .................................... AGTCTATCTACCGTTAAACGATGGAAAGAAAGTGTAAAAAAT 1226947 36 100.0 37 .................................... ACAGTCCATTCTTTTATCTCCGCTAAATTGATATCTT 1227020 36 100.0 36 .................................... TGGTCAAATCGCTGATCTCGTTGTCTATCATCAAGC 1227092 36 100.0 37 .................................... AATGGAAGCATAAGGTAACTCCAAATTAAATACTCTA 1227165 36 100.0 38 .................................... AAACCCGTCAGGTATATCAATTTTAGCCTGTTCATCGA 1227239 36 100.0 39 .................................... GTGAGTGCATGGAAAAAAGAAATCAAAATCCCTGTTTCC 1227314 36 100.0 41 .................................... TTTTGCCTTTTGCCGCAATATATCAAGGTTGCCTATAAATT 1227391 36 100.0 36 .................................... GGGTAAAGCCACCCATGCGTGTGTTGACCAATGTAA 1227463 36 100.0 36 .................................... ATCTTCCTGTTTGGTTTCGCCTGTGAGTAGTTCGCA 1227535 36 100.0 37 .................................... TAACTGCGGGCGCTCACAATCAAACAGAGAATCGATC 1227608 36 100.0 36 .................................... TCTTGGTAATAGGTAATAGGAACGAGGAGAAGCCGA 1227680 36 100.0 38 .................................... TCATTTGATTTTTCCTCGTGTGTTTTTTGCTGATAACT 1227754 36 100.0 36 .................................... GCGCGAGTGCCATTTTCTTGAATCTCTTTTACAGAA 1227826 36 100.0 38 .................................... TCGCCAATTAGTATAAGGCGATTAGCTGGTATATCTAG 1227900 36 100.0 41 .................................... ATGGATATTTAATAATTGATACAGTAGAGGCTTTTTTGTCA 1227977 36 100.0 39 .................................... AATTCTTCTACCCGCAATAATAGCGCTTCGATTTCTAAA 1228052 36 100.0 39 .................................... TCAGCAAAGTCATTGACATCCATAAACCACTCTTCCCAT 1228127 36 100.0 36 .................................... TTGAAAAGTTGTCGTCAATCCTGAAAAAGGAGCATT 1228199 36 100.0 36 .................................... TAGTTGTAGCGTAGCGGGCAACGTTCGAGTAGTTGA 1228271 36 100.0 36 .................................... TTGTTTTTCTGAAATAGTTTTGCCTAATTTTCTTTA 1228343 36 100.0 40 .................................... TTCTCCTGCATTCTCGTTAGACATAGAAACACGGGGGAGA 1228419 36 100.0 38 .................................... GTATCTAACTAATCTCTATTCCGTTACTGTCAGCAAAA 1228493 36 100.0 39 .................................... CAGCAAAGTTTTCTGGTAACTTAAATTTAGGTTTTTTAG 1228568 36 100.0 35 .................................... AAAACTTGCCTAATTCGTTCTTTACCTATTCTTAA 1228639 36 100.0 40 .................................... GATCGCGAAAATGAAAGCCGCCTAAGCCTCTACGATCAAG 1228715 36 100.0 37 .................................... GTGGTGGGACAAATGGCTATATGTGGGGGAGATTTTT 1228788 36 100.0 35 .................................... ATAACAAAATGATATAATTAATGTGACAGATTAAT 1228859 36 100.0 36 .................................... TGATGGCCCTCACCCACGCCGCCCTATCCGTGGCGG 1228931 36 100.0 39 .................................... TTTTTATTGATGGCAAAAGAGTATTTATTTTTATCGATC 1229006 36 100.0 35 .................................... TGATCCGCTTCCCATTGGTGGCCGCAATTATCGCA 1229077 36 100.0 38 .................................... CTAATTAATAAATATACAGAAAATAGCAAACTAGGCTT 1229151 36 100.0 35 .................................... GTCCCGTGATTTTGGCGATTTCCGAGTAGGTTCGG 1229222 36 100.0 38 .................................... CCAAGTGCGATTAGTAACAATTTCTTCTTCGGTTTTGG 1229296 36 100.0 36 .................................... TGGAAAATTTGTGACAAAATGGGATACATAATAGTC 1229368 36 100.0 37 .................................... AAAAGCGACAAAATACCCTAGGTCTTTGACATAAATC 1229441 36 100.0 35 .................................... CATTTGCCACCTGCCAAAAATTGATTAGTTTCTAA 1229512 36 100.0 40 .................................... AGTATAGACCCGCATCATAAGAATCCCGGCTATATCCGAT 1229588 36 100.0 38 .................................... TTTTGTCCTTTGGCAACCATAGTAAAATTGCCAGACAT 1229662 36 100.0 47 .................................... CTAAAAGCGAGATTTGCTTTTGAATTAATCCTTGCTTGGCTTTGTCA 1229745 36 100.0 36 .................................... ATTCTTCGGGTTTTTAGCCCGCAATCAAACCAGTAG 1229817 36 100.0 38 .................................... CACACACACAGTACAATGTTCACTCCGGAGTATATGCA 1229891 36 100.0 38 .................................... ACCTTCCCATTTTCCCACAAATTCACCATTAGGAGTTA 1229965 36 100.0 36 .................................... GGGAAGGGGTTAAATATACCTATGGTCAAAGATTGC 1230037 36 100.0 42 .................................... TTTGTTGGTGTGAGTGTGGCTATTAGTCACGGCCGCATCAAT 1230115 36 100.0 40 .................................... TGATCAGTTAATAATCAATTAAACAATCTTAACGCAATCG 1230191 36 100.0 36 .................................... TAATCAGGATTAAAATCCTCCTCCTGAAGGATTTTG 1230263 36 100.0 42 .................................... TCTCGAAAATAGAAAGCAAGTTTTTCTCTGTTAAGATAGTTA 1230341 36 100.0 37 .................................... TTAAAACCTCGTTGTTCTAAAACTTTATTGTACTCTT 1230414 36 100.0 42 .................................... TGTTCTGTATTGAGCCACAAAGGGTCAAGGGTTACGGATACC 1230492 36 100.0 36 .................................... TGTAAGATTAAATAACTCTACTACTATGATAACCAA 1230564 36 100.0 37 .................................... TAGGTTCCTTTCCGCGCCTCATGGAATGCAATAAATT 1230637 36 100.0 38 .................................... AATCAATATCTAAAAATAGATGTTGTTTGTCAAATAAA 1230711 36 100.0 37 .................................... TGAAGAGGGGGAAAATTTAGGAGTAATCGGCGATTTA 1230784 36 100.0 40 .................................... ACTACTTAAAACTCTTGCCATGTCATCGGGTCGGTTGATG 1230860 36 100.0 36 .................................... TTTTCGGCTAATTTTTTACTGCACTTGTAGCGATAA 1230932 35 77.8 0 .............-T...C....GC.....CTC... | AG [1230941] ========== ====== ====== ====== ==================================== =============================================== ================== 80 36 99.7 38 CTCTCTACTCGCTAGAGAAATTAATTGAATGGAAAC # Left flank : AGTTTTCAATACCTACCTACTTAATCATGTTATTTTATGTCATCGCCTATGATATTCCCTGCAATAAAAGACGTAAAAAAGTGGCTGATTTGCTGGAAGGATACGGCCAACGGGTTCAGTATTCAGTTTTCGAGTGTGTTTTAAGCAAATCTCTATACAATCAGTTAAGAGAACGCCTGCAAAAGCAAATCAAAGAAAACGAGGATAGTATTCGATTTTACCCCATCTCTGGCCATACTTTAGCACAAATAGAGACTTTAGGCGGTGTCCCGCTAACTAAAGCGCCAAGTTCTACGATCATCTGATTCGGTATCATCGACTAGCGACCGACAGGGGTGGGAGCAGATAACCTCGGTTTCCGGTAAAATCCCTCGATCTACCACAGGATAAGGGTTTTGTGGTTTATGGGGTTGACTGCGCGACCGTATCTAGCTATAATTAACTTATCCGTCGCAACTGGCTTCCGAACCCCAATCCTGTTCGGACGTTTGCCCACCGGC # Right flank : CAGACGATTTAAATGCGCGGGCAGCTTATCCTATATGGTAATGTTTAATTATATTCCCACAAAAGTTGCTTATGTCCTTACCTGAACTCCCTCTTCATCTTCAATTAACCCAAATGGTTTCGGGTTACTGGCTATCTCAGGCCATCTATGCTGCGGCTAAATTAAGTCTAGCCGAGCATTTAAGCAAAGGAGCGAAATCCTGTCAAGATTTGGCCTCCCTAACTGAGACTAATCCTGCTGCTTTATACCGACTGATGCGAGCATTAGCTAGTGTAGGAATTTTTCAAGAAACTGAATCTCAACAGTTTATACTAACTCCCTTAGCCGAACATTTATCTAGTGACCATCCCCGGTCAGTAAAAGCGACAGCGATTATGTTAGGAGAAGCCCCCCATTATCAAGCCTGGGGAAATGTGTTACATAGTATTAAAACGGGACAACCATCCTTTGATGATGTCTTTGGGATGGGAGTCTTTGAATATTTTCAAACCCATCCCCTA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTCTACTCGCTAGAGAAATTAATTGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.30,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [41.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA // Array 3 3064870-3065854 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP089094.1 Microcystis aeruginosa FACHB-905 = DIANCHI905 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 3064870 36 100.0 36 .................................... CCGTGATATTCAATGGGGGGCGTCTGGGATTTTTAA 3064942 36 100.0 36 .................................... TCACTACTAATGTGGCATTGTTTTTATGGCCTTTTG 3065014 36 100.0 34 .................................... CCAGCCGTGAACACGCAGCCATGGAGCAGCGTCA 3065084 36 100.0 40 .................................... TCGGTGAGCAGTCTGTGGATTTCTTGTTTGAGGCTTGGCA 3065160 36 100.0 36 .................................... TTTTGTAATACTGATAAATCTATCAGAGAATCAAGA 3065232 36 100.0 38 .................................... TCAGCACAAGAGTTCGAGTTAAAGTGGTACGAAACAAA 3065306 36 100.0 36 .................................... CTAGGGCATGGACACTTTGGCAATTGGCTAAAAGCC 3065378 36 100.0 41 .................................... TAAAATTGCCTCAGCTAGGACGGTTTAACTGGTATGTTTTC 3065455 36 100.0 36 .................................... CCTTACAGCGTAAAATCGATAAACAGAGCAAAACTC 3065527 36 100.0 39 .................................... TAGATTTAATTCAAGAATTAGCCGATAAAATACTGGCAT 3065602 36 100.0 35 .................................... CGAAGCCATAAAGTTCAAGACTCGTAAGAGCGAGC 3065673 36 100.0 36 .................................... GCTTTTGGTACTCAGCAATCATTCTTTCTGGATTAG 3065745 36 100.0 38 .................................... AGGAATTTTTGGTTGTCACTCGTTTCAATCCCTAATAA 3065819 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ========================================= ================== 14 36 100.0 37 GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG # Left flank : CTTCAGCAAACGAACCTGAGTGATCGCACTAATTCCTAGAAGGCTTAACGCGACAATTTATAGCATTTTTATCGATTTTTGTCAAGATATATTTGACACAATTTATTAGAAAAAGGGTTTCTAATTAAAGAGGGCGAATGCAATTCGCCCCTACAATAATATTATTATTATTGTGCCAATGGTAGGGGCGCATCGCGTGCGCCCAGAATGTCCTAAGTAGGTAGGCACAATTATTTGGGCGAATGCAATTCGCCCCTACAATAATATTATTATTATTGTGCCAATGGTAGGGGCGCATCGCGTGCGCCCAGAATGTCCTAAGTAGGTAGGCACAATTATTTGTAGGATGGGTTAGCGGTAGCGTAACATAATCGGGCGTTGGGTTTCATGCTTCAACCCAACCTACGTTCATTTTATATTTAATTCCACCCACCTACTTATAGATATTTCGACAAAATTGAAAGGCAGAAAAAGGGTTTCTAAAAGAAACCCTTTTTCTA # Right flank : GAGTACCCCTTGGAAAGTCTCATCGAGAGGGGAAGACAGACCCCCAAATCGACGCATCTCCAAAAAGGTGGTCCTGGGGGGGATAAAAGTCCCGATACCAAAGGGTAGAACCCTGACTGGGAGAGCAATCGACACATCTAACCAGAGAATCGGGGTTTTAGGTCGGGGAGGGGGTGCATCGATTTTCAGTCAAGAGTTAGGGGACAAGCTAGATGATGTAGAGATTTGGGGGTGGTTGAGGAGGAGAACCTCCCATCACCAATAATCTAGAGACAGCTTCTTCGGAAATCCCATAGAAGCGCACATCATCCTCTTGAGGATTGACCCTTTCTACTACTTTAGCGTACAGTTTCCGCCTCTCGATGTGTAATTAATTTTGCTTAAGTAATTATCTGTAATTAAGTAGCTGGTTATAATTAAATTAAAAATGGATTTTAGGTTCGATCCCCCCTGCCCCCCTTGATCTATCCATTAGTCACATCTTTCTTAACATAAAATTT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.70,-4.90] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [70.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA // Array 4 3272191-3271504 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP089094.1 Microcystis aeruginosa FACHB-905 = DIANCHI905 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ======================================== ================== 3272190 35 100.0 37 ................................... GCGACCACTAGTCCGCTCACGATACCGAACGAATAAA 3272118 35 100.0 40 ................................... TTGACTTTATTCTGTTTAGGAAGGGTCAATTTTCCTTGCT 3272043 35 100.0 39 ................................... CCCAATAAGAGAACAAACCCCATTATAAAAATTGGGGTT 3271969 35 100.0 37 ................................... GAGAAGTTAGATACTTTTGCACTACCCCACACATGAA 3271897 35 100.0 36 ................................... GGTTTTAAACTCCTTCTCCAGAAGAATTGCGGAGAA 3271826 35 100.0 38 ................................... GTGGTATCCTGGCTAGCCACCGTAGTGATTTTCGCCAG 3271753 35 100.0 35 ................................... ATAAAGCTACATCGTCGCTGTTAGCCGCAACATAC 3271683 35 100.0 36 ................................... AAATACCTCCTAGCTGGAATGCGACTAGCGCACCCA 3271612 35 100.0 39 ................................... GATGTGTAGGGTTAATTCATGAATTAACCCTACAATTTT 3271538 35 77.1 0 T..AA........AA.T......C.....A..... | ========== ====== ====== ====== =================================== ======================================== ================== 10 35 97.7 38 CTTGCTTCCAATTCGTGAAGCGTATGAATGGAAAC # Left flank : ATTACGATTCATCAAGTTGGTCATCGTCGAGATATTTATTCTGATTAGTTTTAGTTTAATTACTTCCATTCCAAAAAATTGCTCCTTCTAAAAGCGATCGCACTCCTCCTCATCAAAATCTCCAAAAAAGTTGCTTCTTCCAAAAGTGATCGCTATTCCTCATCATCAAAAAGCGATGTCGTCCTGACAATGAGGGACAGGAAAGCAGTACCCATGTAATTTTAATGGACAAAGCCCTTAAATCTGCGGGTATTAGTCCATAGGAACAGTGATCAGTTATTAGTTATCAGTTATCGGTTATCAACATTTTTCGCGGGTTAGACACAATGGCTGAAAATCTAGAGTTTTCGTTGAGGTGCGTCGATGCCTTGTCCAGTAAGGCTTTGAGCCTGATGACCGAGGTGACTATTGACAATTATTATTAATAATGTCTATGCTTTTCAATATCCCACGAAAAATCGTTGTACAATCCTTGTACAGCCTAGCTTTGCAAAGCTAGT # Right flank : GATGCTTAATTAAGAAAAATCAATGAAAACAAAGATTGTTTAAAAAAAATTATTTAAAATTAACACAATAATTAGAAATTTAGTGATAGATATAAAAGTACAAAAGAGCCAATTAATCTAACAATCCTATTTTTTTAGCCAGAGATAAGTCTTTTCTAGGTCTTTTCAAGGCTGTTGAATATACCTCTTCAACAATCGAGTTTTCTATAGCTTTATGTCCAAATATATAGCCATCACCCTGACTGACGGACACAAGTGGGTCAAAACCTGACAAGACAAGGGTTGCCAAAAAGAAAAATATCTGGGTAGATAGGGAAAAAGCAAGAATCCCTACAAGATGAAAACCGAGAACAGAATCTTCTCCCAAGTTTATTCCTATCTAGAACAAGGAAGCCGATTTGTGGATAAAAGACATTTAACCGTCCTCAGTTGGATGGTGACAGCCCTACTCAGTAGTCAAAGTCTCAATCAAGCCAGATGGGAACCCTTTGTACAAAGCA # Questionable array : NO Score: 3.15 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGCTTCCAATTCGTGAAGCGTATGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [85.0-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 5 3275070-3274315 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP089094.1 Microcystis aeruginosa FACHB-905 = DIANCHI905 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ======================================= ================== 3275069 35 100.0 37 ................................... CCTAATATCTTCCGCAATGGCAAGCACTTCTGGGTTA 3274997 35 100.0 36 ................................... CCTCCTTGCCATGGAAAGGAACTAGTGGTGGGGGGA 3274926 35 100.0 37 ................................... GGCAAGCATCCATGCTACCATCATTAGCAAGCACCGC 3274854 35 97.1 39 .............................A..... AGTCTCTACCTCTGTAACAACAACGGGTACCTCGGCCTG 3274780 35 100.0 36 ................................... TCTTTTTCGGTAGAGGCCTCTGAGGAAACCCTCAAA 3274709 35 100.0 38 ................................... ACTCTATCCTTGGGGATAAGAGCACTTGTTTCCCCCAA 3274636 35 100.0 36 ................................... CCAAATTGTTCTCCTGTGGGAGACAAAATCCACCAA 3274565 35 100.0 37 ................................... GTTTCATCCGTCATCCACCATACAATCGGATCGATGC 3274493 35 100.0 35 ................................... TTTTTCAACATTGTTTTAAGGGACCTAGGGTTAAC 3274423 35 97.1 39 ..................................A GATGTGTAGGGTTAATTCATGAATTGACCCTACAATTTT 3274349 35 77.1 0 T..AA........A..T...T.CC........... | ========== ====== ====== ====== =================================== ======================================= ================== 11 35 97.4 37 CTTGCTTCCAATTCGTGAAGCGTATGAATGGAAAC # Left flank : ACGAGGTTTATATTGGTAGCGCCGATTGGATGACGCGGAACCTGAGTCGTCGCGTGGAAGCAGTGACACCCATCGATGAACCAGCGATCGCCAAGGAACTGGAAGAAATTCTCGGCATCATGTTGTCAGATAACCGACAAGCATGGGAATTACAATCCGATGGCAGTTATATTCAGCGTCGTGCTGACAATGAGGGACAGGAAAGCAGTACCCATGTAATTTTAATGGACAAAGCCCTTAAATCTGCGGGTATTAGTCCATAGGAACAGTGATCAGTTATTAGTTATTAGTTATCGGTTATCAACATTTTTCGCGGGTTAGACACAATGGCTGAAAATCTAGAGTTTTCGTTGAGGTGCGTCGATGCCTTGTCCAGTAAGGCTTTGAGCCTGATGACCGAGGTGACTATTGACAATTATTATTAATAATGTCTATGCTTTTCAATATCCCACGAAAAATCGTTGTACAATCCTTGTACAGCCTAGTTTTGCAAAGCTAGT # Right flank : AGAATGCCAGGGATCAATCCCATCTCATCGGTTAAGAAAAATCCGAGATTTCAGCGAGATTATGCGTCAGTGGGGACAACAATTTCAGAGGAACTTTAACCAGACTGAACTCGGCAGAATAATTTATGCGGGAGGAGATGATTTTTTAGGCATCGTTTATAATAGCCAATTTCCTGATCCACAACTCGACTCGATCGATCTCGATCGAGTTCTCCACTGGCTACAAACTCCTCATAAGTAGAGTTTGCTGAATAAATGTGAAATGTAGGCAAGGTCAGGGTTTTGTGGCTTTTCTCGTGAAACAGGTGCAAGATTTTGAGAGAATCGTGCTTCAAAACCTTGCGTCTTCATCGGCCCGCGTCCTGTAGGGGCGAAGCATTCGGGCAGTAACCTATCGGTGAAACCGTAGATTTTCTATCCGAATGCTTCGCCCGTACTTTTTCAGCAAACCCTAAGCAGCGATCGCACTTTCAAAAGACCAAATAATCACATTTAAAGGA # Questionable array : NO Score: 3.13 # Score Detail : 1:0, 2:0, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGCTTCCAATTCGTGAAGCGTATGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //