Array 1 208973-208543 **** Predicted by CRISPRDetect 2.4 *** >NZ_WCTU01000004.1 Bacteroides uniformis strain BIOML-A14 scaffold4_size334961, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 208972 47 100.0 29 ............................................... GAAACACTCGGGTACATACATTGTTAGGT 208896 47 100.0 30 ............................................... AGGCTTTCGAGTGGATAACGGAGAAGGTTG 208819 47 100.0 29 ............................................... GAAATCCAAAAAAATGTAATCCCAAGCGC 208743 47 100.0 30 ............................................... TTTCACAGACTTTAAAACGTCTAAAGCTAT 208666 47 100.0 30 ............................................... TATCAGTAATCAACAATACAATTTGCGGCT 208589 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 6 47 100.0 30 GTTGTGATTTGCTTTCATTTTAGTATCTTTGAACCATTGGAAACAGC # Left flank : GCCTCGCTCTTTTTCAGGTAGAACGACACCTTTACATTTGCCTGATTCATAACCTATTCCTTTGTTTGCAAAATTATTATATAGCGAGCAAATGAATGGCATGAAAAATATAGCGGAATATAGAAAAAGCCCCCTTGACTTCCAATCTGAGACTGTATTTTTTCCTGATACGGAAAATTTTGACTAACTTTGCATTAGCAAAAAACAGACAGAACAGCGTTCTTGCGGTGGTGAACAGGGGTAGAAAAACAGTTTTGGAAGTAAATTTCATACCTATTTTCAATCCCGAAAAGGCAACGGATAAGTAGCGATTTGTTTGCCTAACTCCCCAAAAACAGGTCAAAAACCTCAAATGGAAGAATGTGGAACAAAACGACTTATCCCTTTCTCGTCCAAGCACTTTGCATTATTCCTCTGAAATCCATCCGTATGTGAGCGAGTTTTAGTATCTTTGAACCATTGGAAACAGCTAACATACTATCGAATTTGCACCCCTTTTG # Right flank : TGATTACAAGTAACAATCTAATATTCAAACGATTACACATAGTATTAGAATATAAAAAAAGAATGCTGCTTCTAAAAAAATCCCGCCATTGCGCGGGATTTTTTTAGAATAATTCTAATTGTTGTCCAGGCGTATTCACATCCACAGTCTTTTTCCCATAAAAAAGTGCTATATTTCCAAATTGCTTGTCCGTAATGCACATAATTCCGACACTTCCATAGTCCGGTAAGAAAGATTTAACTCTTTTTATATGTACCTCCGCATTCTCACAACTCGCACAATGACGAACATATATAGAGAACTGGAACATCGTAAATCCATCCTTTTGCAGATTTTTTCTAAATTCCGCATACGCCTTTTTATCCTTCTTGGTTTCGGTAGGCAAATCAAACAACACTAATACCCACATAATGCGATATTCACTAAACCGGTCCATCACATCTCTGGATAGGATATTTTACGCAACTCACCACTGAAACATTTATACAGAGAAGCCGTAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCATTTTAGTATCTTTGAACCATTGGAAACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: R [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.00,-1.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [80.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 2 286517-286240 **** Predicted by CRISPRDetect 2.4 *** >NZ_WCTU01000004.1 Bacteroides uniformis strain BIOML-A14 scaffold4_size334961, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 286516 47 93.6 30 ....................GCT........................ AAGCCGTCCGCATCGTACAGTCTCACGGCA 286439 47 100.0 29 ............................................... AGGACGGGCAGCCGAGCGATTTTCTTAAA 286363 47 100.0 30 ............................................... CTTTCTCTTTTAGGAACTGCTTTATATTCT 286286 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 4 47 98.4 30 GTTGTGATTTGCTTTCATTTTAGTATCTTTGAACCATTGGAAACAGC # Left flank : TGTTCTGTATGGCAGGGCCTGCTTTCCATATTTCGTCCAGAAACACGACATCGGCTGTGGGCAGATAGCCGTCGATGGCACGTTCGTACTTATCGGATTCTTTCAGCCGGCTGATGCTGACGGGACCGAATATCTCGTCGGGTGTAGAGAATCGGGACATCAGGTATTCGAAGGCACGGGCATCTGTAAAAGCAGACTTTAGCCGCCTGGCTACCATTGACTTGGCTACTCCCGGAGGCCCCAGGAGCAGGATGCTCTCACCTGCCAGGGCTGCCAGCAGGGAGAGGTTTATTTCGGTTTCTTTTTCGTATACTCCCCGGTTCATTTCGGAAAGGAGGAGGCGGATGCGTTGGATCATTTCCACAATATGATTTATTTATAGTCAGTACTCATGTATAAAGAAAAGTGTGTAAAGATACCAAATAGTAGCGAAATCAGAGAGATTCTTATTAAGATTCACTATCTTTGGAAAACAAATACACACAGACACGCACACACAC # Right flank : AAAAACAAATCGGCTTTGCCCCGTTCGGCTGTTGTGATTTGCTTTCATTTTAGTATATTTGTTGTAATCTGAAGTATCTTATTTGATTATCAACGCTTTGTAGAAAACTCGCATGAGAACGGGCAACGGATAAGAAAATTCCAAGCTGTTTAGAATCACTATATTCCTCATGCTTTCAAATAACTCTTTTTTCTTGATGCAAAGGTAGCATTTTTTCGTGATTGCCGGTAATTTTCGGGCATAAAATATCACGGTCATTTCAAGAAACATATACAGCGGACATGACAGCCATACCGTAGCCGAATCCCCGTAACTCACAGGCAAAGGTAACCCGTGTCCTGCTCGTACAAGCAAGGTCAAGCCCTCCGGGTGTCGTGGAAAAATCATCCTCGCCCGGAGGGCTTGCGGTATTTTTCCCGCCAACCTTGCATGTACGGGACACGACCTTTTATGGCCTGTAGTTACGGGAACTCCGGCCCCGAAAAGCCGGATCACTAAAA # Questionable array : NO Score: 5.78 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCATTTTAGTATCTTTGAACCATTGGAAACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: R [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.00,-1.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //