Array 1 3145627-3148896 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP022656.1 Delftia acidovorans strain RAY209 chromosome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 3145627 28 100.0 32 ............................ TGCTGGACGCTGTCGATCTGTCCGGCATTGCG 3145687 28 100.0 32 ............................ AGAGCCGCAGGGCTCTGGCCTGCAATCTCAGA 3145747 28 100.0 32 ............................ ACTGTCATGCACAGCACTGTCCAGGTGGCCCA 3145807 28 100.0 32 ............................ TGTTCGACGCAGTGGATGTGTCCAGCGTTGCG 3145867 28 100.0 32 ............................ CACGAAGTCTTCGTAGTCACCCTGGGAGTCCG 3145927 28 100.0 32 ............................ AACATTGCCGAGCATGAGGCATTCCGGCTGTG 3145987 28 100.0 32 ............................ ACGCTAAGCGTCGCATCGATCTGGGCCTTGCT 3146047 28 100.0 32 ............................ ATTGGGTGCTGGTGCCGCTTTTGGCATGGGCT 3146107 28 100.0 32 ............................ TTTGCCCGGTTTGCCGCAATGGTCAGCGACCG 3146167 28 100.0 32 ............................ AGAAGCGGCGGCGGGGTTGTACCAGGCAAGCG 3146227 28 100.0 32 ............................ AGTGACATGCGACGCTCCGTACACCGCCAGCG 3146287 28 100.0 33 ............................ GGACAGATCGACAGCGTCCAGCAGGTCGTCCAT 3146348 28 100.0 32 ............................ ACTTGCGATATAGCCACTAGTACATGCTGCAT 3146408 28 100.0 32 ............................ TGCTCGGTGCAAGGCATCAAGTTGAAGGTGCG 3146468 28 100.0 32 ............................ TGGTAGGTTTGGCCCTGGTCATTCCTTCGCTC 3146528 28 100.0 32 ............................ TGTACATAGACCCTGGGCTGCTGCAGCAGGTG 3146588 28 100.0 32 ............................ CTGTGCGGTGTGGGATCTGCGGTGACCATCAT 3146648 28 100.0 32 ............................ TGCACAAGACATGGGACAACGGTCAAATCACG 3146708 28 100.0 32 ............................ TTGCGGCCCGCAGGCCAGAAACGAAAAAGGCC 3146768 28 100.0 32 ............................ TCTTCGAACAGCATGCGGGCCTCTGTCAGACT 3146828 28 100.0 32 ............................ GAGTGGGAGCGCTTCAAGCAGTACGCCACCAA 3146888 28 100.0 32 ............................ AGCCGCAGTGACAGCCAAGCCCGCTGCCGTGG 3146948 28 100.0 32 ............................ ACCCTCCTCTGCCTTGTCGTCGGCATCTCGGA 3147008 28 100.0 33 ............................ CCCTGAACTATGGCAAAACGAATGACAGAAGAC 3147069 28 100.0 32 ............................ TTGCGAGGCGTGTGCACCATCTCGTAGTCGCA 3147129 28 100.0 32 ............................ TTGCGAGGCGTGTGCACCATCTCGTAGTCGCA 3147189 28 100.0 32 ............................ AGTCCAGGCGGCAGCACTCTTCCCATGCTTTA 3147249 28 100.0 32 ............................ ATCGGCAACGGCAAGACCTGGGATGCAAAGTG 3147309 28 100.0 32 ............................ TACGTCAACAACATCACGATTAATGGTGTGGA 3147369 28 100.0 32 ............................ AGCCCAGGCGAATGGAGATGATGGCGCCCTTG 3147429 28 100.0 32 ............................ CTCCCCTGCGGCCGCTGATATTGACCACACCT 3147489 28 100.0 32 ............................ AGCTACACGGGGGTGCGCGCTTACTGGCACGA 3147549 28 100.0 32 ............................ CTGGTGCAAGACGCCGAGGTGCGCACGCTGCC 3147609 28 100.0 32 ............................ TTCAACTGGACGCCCGCGCAGATCGGCAAGAA 3147669 28 100.0 32 ............................ AAGACCTGCACCAAGCCGACTGGAGCCGCGTC 3147729 28 100.0 32 ............................ AACACCCCTCCCCTGCTGTCCCTGCGCGTCAC 3147789 28 100.0 32 ............................ TTGCGCTCTTTCTTGCCTGGCTTGCGGCCGTA 3147849 28 100.0 32 ............................ ATCGGGGACGGGCCGGCGCGCGTCTGGGATTG 3147909 28 100.0 32 ............................ AATACGGGGGGTTCAAATAAAACAGCGTGTGC 3147969 28 100.0 32 ............................ TTGGCCTGGACCTGGGCGCTGTATGCCTGGAC 3148029 28 100.0 32 ............................ AACGGCAAAGACAAGCCCACGAAGCCCGCACC 3148089 28 100.0 32 ............................ TGAATGCCCACCAGCGTGCTTTTGCCGCTGAC 3148149 28 100.0 32 ............................ ATCCGCGCCAAAGTGGGAGCGCTGGCCAGGTG 3148209 28 96.4 32 .............G.............. TGTGGGATGTGTCGCGCGCCACCATCGCCTAT 3148269 28 100.0 32 ............................ GAGAGCCCCGCCGCGATGGCGATTGCCTTGGC 3148329 28 100.0 32 ............................ ATGAACGGCGGCACCCGGAACCAGCGGCAGAT 3148389 28 100.0 32 ............................ TCATGAGAGCGGTCATCGCCATGTCTGCGAGC 3148449 28 96.4 32 ............A............... AGGCTCTGCCGTGTCTGCGCCGTCATGTAGCC 3148509 28 96.4 32 ............A............... TCTGCCTCGTTGTTGGCATCAGCGACGGCGAC 3148569 28 100.0 32 ............................ CGCTTCATCTCGGTGATCCACCCATCCACCCA 3148629 28 100.0 32 ............................ AGAGTGCTACCGGGTTGTGCACACGACCCCCA 3148689 28 100.0 32 ............................ ACTCGGACAGCAGCTCAAGCATCTCAGTGCTC 3148749 28 96.4 32 ............A............... CCAAGGAAGCCTCATGACAGCAACCAAAATCC 3148809 28 96.4 32 .....................C...... GCAATGCAACGAGTAACACCGGCAGAGCCATT 3148869 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 55 28 99.7 32 GTTCGCTGCCGCGTAGGCAGCTCAGAAA # Left flank : CCGCGCTGCGCTGCCTGATTGAACAGCCCTGGCTGCAGGGCATGCGCGATCACGTGCACTGCACGCCGCCAGCTTTGGTGCCAGAGGGCGCCGTGCCCTACCTGGTGCAACGCCGGCAATTCAAGACCAGCCCCGACCGCCTGCGCCGCCGCCGCATGCGGCGCAAGGGAGAAACCGCAGAACAGGCCGCGGCCGCCATCCCCGACAGCGTGGAGCGCACCCCGGACCTGCCCTACGTTCAACTGCGCAGCGCCAGCACCGGCCAGCCGTTTTGCCTGTTCGTGGAGCAGAAAGCGGTGCAGGGAACGGCGGGCCAGGAAGGCTTCAACACCTACGGGCTGAGCCTGGGAACTACTGTTCCCTGGTTCTGACCCTTTTTCTGGCGGCCTGAAGACTGTCTTTTAAATCAACAGCTTGGCGGATGCCCTGGAATTTGGGGTGTTTGCCAGCTGGAGGTGAAAGCTCTTTCAAAATCAATGGATTAGGGAATTTTTCGCCGT # Right flank : AGGCTGCTGACTTGGATGCGACAGAGAAGCCTCTGCCCTCAACCTTCCGGGCCATGCTCCGCGTATTCCACAAAGGACGGTGCTTCATCAAACAGTTGCAGGAGCAGTTTCAGGCGCCGGGCGTAGAGACTATGTGGACGATTGAAGACCTGGGCGGCCAGGGCGATGGCTGCGCGGGCGAGGTACCACTCGTTGTCGAATTCGCTGGAGTCCTCGAATACCTTGTGCCGAATTTGCCGGATGTGATTCAGCGCCAGGTCAGCAGCCAGGTCCACCTCGACATCCGCGTCATGCCAGTCCATGTCGGCACAGCGTGTTTCGATCAGGGCAACCAGCCCCATCTCTGCGCGGGCAATGGACAGGGCGATCATTTGCTGCATGGTGGGCCAGGCAGCGGTGTCTACTGGGTGCGACTGCTTGGACGCGGCATCCATGTCGGTAACTCCTCCCGATTCGGTATTGGGGCGTGGCGAGCCACTCTGAATCTATTAGATATCTGT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCGTAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCGCTGCCGCGTAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [56.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //