Array 1 348824-349114 **** Predicted by CRISPRDetect 2.4 *** >NZ_CDNI01000003.1 Paeniclostridium sordellii strain JGS6961, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== ========================================= ================== 348824 26 80.8 38 T....G..T.............AA.. ATGTTTAAATAAATTGAAAATGGTAGTGTGTAAATAGA AT,A [348834,348844] 348891 26 100.0 39 .......................... AATGTTACATTTCCCGTAAATTAAACAAGTCCATTTATT 348956 26 100.0 40 .......................... AAGGAAAATTGTCAATGGACTACTTAAGAATGCGGATAAA 349022 26 100.0 41 .......................... AAGGTATTTGAGGTTTATATTGAGAACCATAAGAATTTATT 349089 26 92.3 0 ......................A.A. | ========== ====== ====== ====== ========================== ========================================= ================== 5 26 94.6 40 GTTATTAAAGAACTATATTGTATTTA # Left flank : GATATGAAACTGGAGGAGCTAAGTTTGAAGCTGGTAGACATACACATAAGACAAGTTCAGGAATTGGAGTTGTAAGAGGTACTGCATATCAAGAATTACTTTGTGATGTTAATTTAATAATACATATTACACATAAGGATTATGATGTAATAGATCATATTTATAAATCTTTTACAACTGATATGCAAAAAACGATGACACTTGGAAGAAATAAAGATATATGCAATTTACTTGATGTTAAGTTAGTAGATATTAATAATTCTAAAGATAAATCAACTGTATTGAAACATAATGCATTTATAGTTAATGATGCTTTTGAAAGCAAAAAAGTTAATTGCACTAGATTTAGGTTAAATACTTTTTACTCATATAATGAAATTTCTAAAAAAGATAAGATAAGGGAATTTGAAAAAGTAATAGCTGGATTTGTATCTAAAGATACTAAAGTTAGACTTAAAAAAAATTATAACTTAGTAGATTCAGAAAACTTAAATGTATAT # Right flank : AGTAATTGGTAGTTAATTTATATATTAAAAAATAATATGATTTTAAGAAAGGGATATAGCTGTTAAGATGGATATGTTTTATGCGAAAGGAAATAAGGAAACAATAGAAGAACACACATATAAAGTGCTTGAACAATTAAATAGAGTAATAGATCTATATAAAGCAAATATAAAATATCATGAGCTAATGAGATTAGCAGTTAAATATCACGATGCAGGTAAAGTAATGCTATCATTTCAAAAGAAATTAAATAACGAGCATTTTAAAAATGTTGAATTTATAAAGCATAAAGATTATATAAAACATAATCATTTATCAAGCTACTTTGTTTTAAATGAAGAGGTTAAAGATCTAGATTATGATGAACTAAGAATGTTATATCAAATTATATATTACCACCATCAGCAAAAGAATAGCATATTTATAAAAAACTTAGATGGAGTAGGAGAAATAATAGACTATATTTCAGAAAATATATTACCTAATTATGACTTTAATT # Questionable array : NO Score: 2.76 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATTAAAGAACTATATTGTATTTA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:84.62%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 2 351385-352334 **** Predicted by CRISPRDetect 2.4 *** >NZ_CDNI01000003.1 Paeniclostridium sordellii strain JGS6961, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 351385 29 100.0 37 ............................. CAAGATATTTCTATGTGTTCTGAATGTGAATCTAAGT 351451 29 100.0 37 ............................. ACAGCTAAGTCTTTAGGTGTTAATTTAGAACAAGTAG 351517 29 100.0 37 ............................. TTGATGGTATATTAGGTGAGCCAGTTAGTAAAATTTT 351583 29 100.0 37 ............................. CAAGTTATTGAAACTGTAATTGAAGATATTAAACCTA 351649 29 100.0 37 ............................. AAAAATGGGACACTGAAAATTATTATTTTTCTTTTAA 351715 29 100.0 38 ............................. ATGAGCATGAACACCAGTACTATTTCCAGTCGTTCCTG 351782 29 100.0 36 ............................. TTAGCTTTGCATATCTCTTTTACTAAATATTCTAGT 351847 29 100.0 37 ............................. TCAGCCAACGCTGGTATCTGTGGTAAATTGATGCCAA 351913 29 100.0 38 ............................. TAGGTAGGTTTGCAATTAGCATAGGTAAAACAGCTTTA 351980 29 100.0 37 ............................. TTCTTCTAGTTTTTACTGATTGTTCTACTGTCACTAT 352046 29 100.0 37 ............................. AGATAAAAAAATGGTGGGGATATACGCAAAAAAACTT 352112 29 100.0 35 ............................. TAAAAAAATTGTATCAGGTTTAGGTTGTAGCTAAT 352176 29 96.6 35 ...................A......... TAAGTGATTTAATCACTTTCGTGAACTCTTTTATT 352240 29 89.7 37 ............TC...C........... TTCTCTTCTACAATATGGATACTCTATATTAGTTGAT 352306 29 93.1 0 A......................A..... | ========== ====== ====== ====== ============================= ====================================== ================== 15 29 98.6 37 GTTATTAAAGAACTATATTGTATGTAAAG # Left flank : GTAAAATACATATATAGTGTAGAGAATTTAAAAAAACATAATTCTGAGTATTTACAAGAAATTAGAAATACTATAAATAATATAAGATTACTAAATGAAAGTGACATTAAAGCAAAAGATATAAAGGTTAGAGAACTTGATACTGTAACTATTATACCAAGAATTTTAGGAACTGAATATAATAGGGAGAATACTATAGTTATTAGACGAGATATTTTGAATAAGTTATTAAAAACTAAAGAAATTAGTTATGATAGCACTAACAATTGTTATTTTATGGATGTTAAATATGATTTTGAACATGGTCTTTATTTAGATTAGAATATATAAATATGTGTATTTGCAGTGACCTAGTTTTATAATTAAATGGTGTTAATGTATTGAAAATACTACGATATAATTAGGTTTAATATAAAAGTGAGAAAACACTATTGAAGGTTCACTGCAAATTACAATAAAATAATGTATGTAAGTATTGAAAATACTTACATACACTTGGG # Right flank : GCAAGGAAAAAATACTATGGATGAAGTAAATGATTAGTTATTAAATACTAAATTAAAAATATAAATGAATGTAGATACTAAGAATGGATTTAATAAAATATAGTTATATAATTATAGCCTAAATCCAAAATACTATAAAAATAATAAAATAAGAAATAATATATAAAAATATACGGAATAATAGTTGATATATAATAAGAAAACCTAGGAGGAACAGAATGAAAATTCAATATGTACAAGGTAAACCATTATTTACAACTATAAATAAAAATAAAAAACAATATCCATATTTAACAGACGATATAGAAACTGATATATGTATAATAGGTGGTGGAGTTACAGGAGCCATAGCATCTTATTATTTTAGTAAACAAAATATTAAAACGGTTATACTAGAGAAAAAAAGAATAGCACATTTAAGCACAAGTGTAACTACATCTCTTTTACAATATGAACTAGATGATAATTTATCAGATCTTCAAGAATATACGAGATTAGAA # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATTAAAGAACTATATTGTATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //