Array 1 184990-183257 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOAZ01000020.1 Streptacidiphilus jiangxiensis strain CGMCC 4.1857, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 184989 29 100.0 32 ............................. TCGACCGGCGTGTCGTTCTCGGTGTCGATGAC 184928 29 100.0 32 ............................. ACCCACGGGGGAACCACCATGCCCCACACGGC 184867 29 100.0 32 ............................. TCGATCAAGCTGGTTGTTCAGTGGCTCACCGG 184806 29 100.0 32 ............................. TGCGTTTCGAACGTGCTCAGCTGGCCTTCGAT 184745 29 100.0 32 ............................. GGCCGTCGCGCCCACCGCTCTCCCGCGAATCA 184684 29 100.0 33 ............................. TCGGTGACCAACTGGGCGAACGTGTCGTCCTTG 184622 29 100.0 32 ............................. CGGCAGGCCTACGAGAACGGCTTCCGCCTGAC 184561 29 100.0 32 ............................. GCCGCCCGGGCCGCCGAGGCGGCGCCGTGACC 184500 29 100.0 32 ............................. AGCCACGTGGGCATCTACGCGGGCGGCGGCCA 184439 29 96.6 32 ....................A........ GCCGGCGAAAGCCCGGGCGCGCTGCAAGTCGG 184378 29 100.0 32 ............................. CACTGGTCACCGCGCAGCATAGGGACGTTCTG 184317 29 96.6 32 ...........................T. GTCCACCGCTCGCCGTCCCAACGCTCGACCAA 184256 29 96.6 32 ......T...................... CCGTCGGACCAACACCCAAATCCGGGGGACGA 184195 29 93.1 31 ................G.A.......... GGCCCCGGGGTAGGTCCCGGGTCCGGCCGAG 184135 29 96.6 32 ..............T.............. GTGGTGGGGCGGAACATGGTTGACCCCCTCTC 184074 29 100.0 32 ............................. TGGTCCAACCCGGTACGGCACTGGGCGTGGGA 184013 29 96.6 32 ....................A........ TACGCCGACCGCATCAGCCGTCTCGTCCTCCG 183952 27 89.7 32 .....T.......--.............. TCGTAGCCGATCGCGAACAGGTCGGCCCGCCA 183893 29 100.0 32 ............................. CAGGCCGCCGCCGCGCCCGCCGGCCCGTACTT 183832 29 93.1 32 ..............G.........C.... CTCGGACAGGACATCGCCGTCGACACCCGGCT 183771 29 100.0 32 ............................. GGGTCGCGTCGCACTCGGGAGACGTACGAACA 183710 29 96.6 32 ....................C........ GCGATCCCGGCCGCCCAGGCCGCGACGTAGGA 183649 29 96.6 32 ........................A.... AGGTGACGGGACAGGAAGCCCACCACGAGGAT 183588 29 96.6 32 ..............T.............. GTGAGCGCCTTCCCGCCCTTGCCGTCGCTGTC 183527 29 96.6 32 ..............T.............. GTGAGCGCCTTCCCGCCCTTGCCGTCGCTGTC 183466 29 96.6 32 ............................A CGACGACGGCCCGGAGGTCTGGGAGTACCGCA 183405 29 93.1 31 ........................T...T TGGCCACGGTCAGCGGGTGGTGGGCGATGTT 183345 29 93.1 32 ....C.G...................... CAGTGGCACAAGACCTGGAACGCGATCCAGCG 183284 28 93.1 0 .........-............C...... | ========== ====== ====== ====== ============================= ================================= ================== 29 29 97.3 32 CTGCTCCCCGCGCCCGCGGGGATGGTCCC # Left flank : GGGCGCCATCGCCCGCCAGCTCAAGGAGGTCTGCACGGCCAAGACCGCCGACGAGGCCGAGCAGCGGTTCGCCCGCTTCGAAGAGGAATGGGGAGAGCGCTACCCGGCCGTGATCGACACCTGGCGCCGCAGTTGGGAGCACGTGATCGTCTTCATGCGGTTCCCCGCCCCGATCCGCCGCGTCGTCTACACCACCAACATGATCGAGTCCCTCAACGCGAGGTTCCGGCAGGCCTCACGCCGCCGCGGGCACTTCCCCGACGACGACGCGGCCCTCAAAGTCCTCTACCTCGTGATCCAGAACCCGATCAAGAACCACGCCAACGTCACCGGCCGGACCCAGTCCTGGAAGCAGGCCATCAACAGCCTCGCCGGCTACTACGGCGACCGCGTCACCGACCGCTAGACCAGACCGAGCACCTGATCACCCACAAAGGATCAGACACTCCCGGCCCCGGGGATGGTCCCGCCGACCGGCGGCGTTCGTCCGCCGCCCTCAC # Right flank : GGTCCGGTGGCCCGTCTAGCTAGGCTGCGGCATGTGGAGGCCTACGAGTATCTGGTCCAGCTCCGCGACGGGCAGGCAGGCACCTCGGACCTGAAGGTGATGGAACAGGCCCTGGAGCTGCTCGCGCGCGCCGCACCCGCTGAGGAGGAGGCCTGGGAACGCCGCAAAAGGCTGCTAGCCGAGCTCGCCCGGCTATCCCTCGAGTCGCCGCACCGGGACGAGACGCCCGAGTTGGCAGCGCTGAGCATCGTGGCGGGCAGGGCGGCCTGCACCGCGCGCCCGGCGGCAGGGCCCGTTCATGCCACAGCCTGCACCAACCTGGCGCTGGCGCTGCTCGCATCGGCCGACCGCGGCCACAGCGCGCCGGGCGAGGAGGAAGCGTTGCGGGACGAGGCGAGGGACTGGTTGGAGGAGGCGCTGATGGCGCTGCCGCCGGACGACCCCGACCGCTGCGCGGTGTGGCTCGACCTCGCCGTGGTCATCGGTCGGCGCGACCCCGC # Questionable array : NO Score: 5.78 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.66, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGCCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [35.0-21.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //