Array 1 25490-30081 **** Predicted by CRISPRDetect 2.4 *** >NZ_VAFS01000035.1 Acinetobacter baumannii strain Aci00834 isolate Aci00834 Aci00834-merged_contig_35, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 25490 30 96.7 30 ............................A. TTCCGCAACTCGCTACTTCCCTGATGCAGA 25550 30 96.7 30 .............................G GAAGATTTGCTTATGGCGTTCTGGAAAGAA 25610 30 96.7 30 ............................A. TGCTTAGTAATGCGCAAAAACGGTCATCCA 25670 30 93.3 30 ............................AG CAGAAGAACGCAGAAAAGCGAGAAGCTTAA 25730 30 96.7 30 ............................A. CTTGAAAGGCTTGAGCTTAAAGCTTTTTAC 25790 30 96.7 30 .............................A CAGCTGGCCGCGTATATAACGGCTCAGTAT 25850 30 93.3 30 ............................AC AACTCGATGTTGGGTATGCAGAGAGCCTTG 25910 30 93.3 30 ............................AA ACTTACACTTCTCAGCGTCAAACCATGCGT 25970 30 93.3 30 ............................GA TTACATCCACGAAAAGAGCTTTAATCAGGA 26030 30 96.7 30 .............................G GCAGAACTTTTCATGACGCTCATTCTCTAA 26090 30 96.7 30 ............................A. ACCTATCAACGTTAAACCAACGATTGCCAG 26150 30 93.3 30 ............................GA TGCAGAAGATGTTTTAGAACGTTATGACGA 26210 30 96.7 30 ............................A. TGGGATGTTATGAATATTCGACATTACCAA 26270 30 96.7 30 ............................A. CAAAATAGAGTTGGCCTTCCTGTTTGGCCT 26330 30 100.0 30 .............................. CAAACGCTTCAACCAGCCACGTCTTTGAAG 26390 30 96.7 30 .............................C TTCCGCCAAATTCTAGGAGGTTAACATGCT 26450 30 100.0 30 .............................. GTGCATACTTATTGCCGCCAGCAAGTAAAC 26510 30 96.7 30 .............................C CTTCGGGAGGTTTTCTTTTGGGGTGATCAT 26570 30 93.3 30 ............................AA GTTTCGGCCTAATGGATGCGGTCTTGAAAA 26630 30 93.3 30 ............................AA GGACTATCCGTCCCTTTGCCGTTTTTGTAC 26690 30 93.3 30 ............................AC CCTCGGGTGGTTTTTTATTGAGGTGATCAT 26750 30 93.3 30 ............................AG TGGCGCGTTCAAGCGTGCCATTGAAGCATA 26810 30 93.3 30 ............................CA GAAGTAAGTCTTGCAGATGCACGATCTAAA 26870 30 96.7 30 ............................A. CCGCCGATAAAACCCTTACCCGATACGCCC 26930 30 96.7 30 .............................C AGCTCCCGATTCAACATCCAACAACATGCT 26990 30 100.0 30 .............................. TGAAAGACTTGAACGTGGTCAAGTCCTCCT 27050 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 27110 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 27170 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 27230 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 27290 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 27350 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 27410 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 27470 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 27530 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 27590 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 27650 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 27710 30 96.7 30 ............................A. CTGCAAGACCACTGATAGTTGTTGAGAATC 27770 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 27830 30 93.3 30 ............................CC AAGCGTGACTAACTCACCAGTTGTCACAGG 27890 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 27950 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 28010 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 28070 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 28130 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 28190 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 28250 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 28310 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 28370 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 28430 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 28490 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 28550 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 28610 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 28670 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 28730 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 28790 30 100.0 30 .............................. CTCATCGTGAAGGTTTTGCAAATATGCCTT 28850 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 28910 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 28970 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 29031 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 29091 30 100.0 30 .............................. CAACTGTGTAACCAGATTTCGCTTTAAAAG 29151 30 96.7 30 ............................A. CAATGTAATGCTCAGGCGATGCCTTATCAT 29211 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 29271 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 29331 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 29391 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 29451 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 29511 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 29572 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 29632 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 29692 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 29752 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 29812 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 29872 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 29932 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 29992 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 30052 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 77 30 95.6 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.32 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.28, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //