Array 1 109355-110825 **** Predicted by CRISPRDetect 2.4 *** >NZ_LXHE01000006.1 Moraxella catarrhalis strain Z7574 Z7574_ctg-6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 109355 28 100.0 32 ............................ ACTGCTAAACACCTGCTAGTCAATGAGCTAAC 109415 28 100.0 32 ............................ ACATTGGGGGCATAGTCCAACTTCATGGCATC 109475 28 100.0 32 ............................ TATTTTCTAGCCTGTTAACTCCTATAATAAAA 109535 28 100.0 32 ............................ CTCCGCATTTAAAAAGTTCTTCGCATGCGAAT 109595 28 100.0 32 ............................ TGCCAACAGAATTTTTTTGCTTATATAGTTAT 109655 28 100.0 33 ............................ AATCTAAACAAATAAGCAACAAGCAAGCTAGTA 109716 28 100.0 32 ............................ TAAAACGCGAGCTAAAATGCCGCGGGTACGAG 109776 28 100.0 32 ............................ TGCTAATTACTACAATAAAAAATAATATTAGC 109836 28 100.0 32 ............................ GCCTACCGTTTTTTTCAGGTGGAATTCGCGGC 109896 28 100.0 32 ............................ CATTTTTTTCTTATGCCATTTTGTAAAAATAC 109956 28 100.0 33 ............................ GTAAATGCCGCGAATGCCGCATTTTCCCTGCAT 110017 28 100.0 32 ............................ GCTAACGTTCTAAGCGAGACTGTTGATAGGTC 110077 28 100.0 32 ............................ ATCACGACGGCGACACACTTGTACAAATGCCA 110137 28 100.0 32 ............................ ACTTATTTTTTTAAAAAGTGGCATGGCGGGAA 110197 28 100.0 32 ............................ GCTCACCACAGCCACCCAAGAGCCAATTTCTC 110257 28 96.4 32 .............T.............. TGTAGAAGACGCGTATTATTGTGAGCTTAGCG 110317 28 92.9 32 .............T.....A........ ATTGGTACAATCTTAGCCTCACACCGCTATGA 110377 28 96.4 32 .............T.............. GTACTTGCCAAGTGCAATATCAGTCGTTAAAT 110437 28 92.9 33 .......G.....T.............. ATTGAACAAGCAATTCATAAAGCCTTACACTAT 110498 28 96.4 32 .............T.............. TAAATGGGGTATACACCGTTATGGTTTATCTT 110558 28 96.4 32 .............T.............. ATAACCTGCTAAAGTCGTTGGCTTATTGGTAA 110618 28 96.4 32 .............T.............. ATTAAGGGCTGATTGGCGTGGTGCAAATCACC 110678 28 96.4 32 .............T.............. AATACAGCTATCCAAGTAACTAACCACCCACC 110738 28 96.4 32 .............T.............. CACCGCCGCGTCGTGATGATTACGACAGCCCA 110798 28 96.4 0 .............T.............. | ========== ====== ====== ====== ============================ ================================= ================== 25 28 98.3 32 CTTCACGACCGCACAGGTCGCTTAGAAA # Left flank : CGCATTGCGGCTTGGGTGATGGATGTCCCTGTGCCAAGCAAGATAACTGTGGTATTGGCGATGGGGATATTATAATAGTGGTTTTCGTATTTGGTTTCGGTGAGATACAGGATGCGCCCGTCTTTTTGCATGACTCGGCAATGCTCAAGATAAAATACATTGGCGCGCTTGGAGTGCAAAATTGCCTTAAGATCCGTGGGTTTGAGCGTATCCATGACGTCAATTTCCTTAATGATGAATTTAATTTAATCACACCCATTATAGCCTGTCAAGCGATGATGCGACCAAATTATAAGCTTATATTATCCATCTGCCATATCAGTTATGCTATACTAAATTTGCCATCAGATGATGATGGGTGTAAAAAAACCTTTATTTTTTCAACTATTTAAAAACTTAATAAAATCAATAAGTTATAACTAGTCAACTTTTGATTGGATAAAAAGGGTCAATCCATCATAAATGGCTGTTATTTCTTAATTTTTTCGGTTATAATTACA # Right flank : AATTTAATGGACAAACCAAAACTAATTCAACAATAGATCAGAACATGACCGAAAACAGGACAGAAAAAGGTATTAGTAGAAATATTATGCTAGTATCTTCTGGGAGTTCTGAGATGTCAGGCGCAGTAGAAGTTGGAAAGAGTCAAGAAATTAACACTAATACAGGTTGGACTACCAGTATATCTTTAGATCATGTTGGCAAATTAGATCATGATATTATGGAATTTAGAATGAAGCAGCCCGAGGAGTATGACAAAGCATATCAAGAAGCAGCTAAAAATTTAGGTATAGACCCACAACAAGATTATTTGCAATTAGAAAGTACGGATAGGCTGAATATGCGAGATGCTTTAAATCCAATCGCTATGCAGAAAAACCAAACATATCTCGGACAATCCAAACCTACAAATGGACTGCCGCAGAACATCGGTGATGTGGCGGCGAAACATTTAAAAAAAATAATAATGAAATAGAGATGCACTATCAAGACGCTATACAGG # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACGACCGCACAGGTCGCTTAGAAA # Alternate repeat : CTTCACGACCGCATAGGTCGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTTCACGACCGCACAGGTCGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.40,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //