Array 1 984041-984856 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP031733.1 Streptococcus chenjunshii strain Z15 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ===================================== ================== 984041 24 100.0 37 ........................ CTAACTAACCTCTGTCATTCTATGTTTTTAAAAATTT 984102 24 100.0 37 ........................ CAAACTGATCTTTATTATCAACGACGTGTGTCCATTT 984163 24 100.0 37 ........................ TAATCTGATTTTGGAAATAGTGAAATACCAATCATTT 984224 24 100.0 37 ........................ TAGAAAATCTTGGCGCTATGGGTATGCCTTACCATTT 984285 24 100.0 37 ........................ TGGGCAGAATTTCAAGAAGCAGGCGTATTGTTTATTT 984346 24 100.0 37 ........................ TTCATTTGAGCTTAGCTTTACCAAATGGTAAATATTT 984407 24 100.0 37 ........................ TGACTACGATACAGAGACTGTATATGTTGACAGATTT 984468 24 100.0 37 ........................ TAGATTGTGTGTAAGTGTTGCGATACCTTCTGCATTT 984529 24 100.0 37 ........................ CAAACAGCTCCGCCTACTGGCTGATCACTGAAAATTT 984590 24 100.0 37 ........................ GGTTTCACAACCTCAAATTTGATGCCTCTTTTAATTT 984651 24 100.0 37 ........................ TAACCGTCCTCAGTCTTTTCATAAGGAACACTAATTT 984712 24 100.0 37 ........................ CGAACACAAATCGTAAGGAATAAGAAAGGTTGAATTT 984773 24 100.0 37 ........................ CTGATGGACAGCGTCAAAGGAGACTTCTACCTTATTT 984834 23 91.7 0 ....................-.G. | ========== ====== ====== ====== ======================== ===================================== ================== 14 24 99.4 37 TACCCGCACACGCGGGGGTGATCC # Left flank : ATGAAAATACTATTATAGAAATAGGAGCAATTAAAGTTAATCAAAATCAGATCGAAGAATTTGAGTATTTAGTGCACTACGATAAGGCGCTGCCAAAGAGTATAAGCCGGCTGACCGGGATAAGTCAGGAACTTTTGAATCGTGAAGGCATGGCCCTTTCGACTGTATTACAAGAATTTTTAAATTTCATCGAAAACCTGGACCTGATTGGTTATGGTATTAATTTCGATATAAAATTTATAAATAGGGAATTAGCGCAATTAAATTATCCTTTGTTGAAGAATAAAACGCATGATTTAATGAGAACTGTAAAAAATGAAAAGCTATTTTTACCTAATTACAAACTCCAAACAGTACTAAAGGCATATGGTATCGAAGAGAAAGTACCTCACAGGGCTCTTCCAGATTCAAAACTCATTTATAAGCTATCTACTAAAGTAAATAAATTTTGGAAGAAGTTTAATCATGAATAGCGACTTTATTGGGATCTTTTAGTATTT # Right flank : CTCCTGCCGGAATTTTTCTACCATTGGTCAAGTTCCTTAAGGGATTTTCTTGAAAAAATGTTTTAATCGGCTATAGTTAGAGAGTGATTTCAGCTGTTTTTCTCAAAAAGTGCAAGCTAAAATAACATCTTACTTTGTCATTTCTTTGATAGGGTGTTAAGTGATATGGCAATAGATAAACTTGCTGATTTTGGGCTAATTTGTAATTGTAATATTTGTACACTCAAAAAGACTCCACAATCTCTGTCGGGGGTTCCCCGCTACAGAAATTATAGAGCCACTTAAATTTAGGCTAAGTCCGTTTTAGTTGTTTTCAAATGATTCAAATCTTTTTAGCAGTCTGAGCTATCTTAGCTAGTTTCTTTTGACGTTCTTGGTCACTGATTTTTTCAATTCCAGTTAGCTGATTGATTTTAACCGGTCGAATGCCGCAGCTTTTCAAAATCTGCCCCTTTAAAACTTTTCCGTAATCCTGAGCAAAGGGTGTAATAAAAGCCGGT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TACCCGCACACGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched TCCCCGCACACGCGGGGGTGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.90,-9.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 997429-997596 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP031733.1 Streptococcus chenjunshii strain Z15 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 997429 36 100.0 30 .................................... GTGTTTCTCGTCCTCAGCTTTTTAAAGTTT 997495 36 100.0 30 .................................... CTACACGGCCAATAGGAAAACCTACAGTAG 997561 36 94.4 0 ................A.................G. | ========== ====== ====== ====== ==================================== ============================== ================== 3 36 98.1 30 GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Left flank : CTAGAACTTATTAAAGTTTTGGGGGTAAAAGTAGAAACAAGCAGTGATACTGTTTTTGAAAAGTGCTTGGAAATTTTACAAATTTATAAGTATCTTAGTAAAAAACGTTTGTTAGTCTTTATCAATAGCGGCTCCTATTTAACAAGAAAAGAGGTTAAAGAGCTGCTTGATTATATTAGCTTAACCAACCAAACAGTCCTTTTTCTTGAACCGCGTAAGCTCTATGATTTTTCTCAGTATATTTTAGATAGAGACTATTTTTTAATTGATGGAATAAAGCATTAGGAAGGATTGCTGGAGCTAATACCGATAATGTAAAAGGAGTTTAGCTGCTTGTTTTGATGAAGATCAGAGCATCAATAGAAAATAGCGCTGAAACCTTGATTTTAAAGCATTTTTTAGATAAAATAGAAGTAATAAAATGGAACTGTTTGATACTGAAGTCTGGCTGGGACGAATAGTGCGATTACGAAATTTCGTAACAAAAAATGTTCTACGAG # Right flank : CCAAGAGCACTGCAACTGCGTAAGTGCTAGTAGCCCCAGTCCGCTGGTTTTAGGATTTGTGTTCTCTTCTTTCCTTGCAATCTGCCTTAGTTAGCGGTACAATAGGGGTGAGGGAAGCGTGCTGCTTCTTCCTGAAAGGAGGTTGTCTTATGCTTTACTTAACTGTTTTTTTGGTTTCTCTTGCTTTGCTGGTAGCAATCGGAATTCCTTATGTGATTGATTTGTTTAAAGCAATGGAAGCCTTTAAAAAAGCCGATGGTGAATCTCTCCACAGTCAATTATGGGATATGTTCGGATTTCACCGTCATTTGCATGGATAGGCAGGTTTGCCTGCTTTCAGATGAGAGACAGATTTTTTTGGGTCTGTCTCTTTTTATTAAGGGATAAAATTCGTTAAGAAGTCCCTGATTGCTCCTGCTATGATGAATAGAAGAGGGCAGCCGGCTGTTGAGTTGTTAAAACTTTCGTCCGTTACGGCACTTCGTCAGCAGAGCAGCAGA # Questionable array : NO Score: 5.26 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [60.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //