Array 1 10299-10626 **** Predicted by CRISPRDetect 2.4 *** >NZ_FUGE01000226.1 Psychrobacter piechaudii isolate Psychrobacter_piechaudii, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 10299 28 100.0 32 ............................ TACAATGCCGCTATCACGAGTTATTGTTAAAG 10359 28 100.0 32 ............................ TAGCAAATGCCAGACGAGTTACTGAGCTATCA 10419 28 100.0 32 ............................ ATTTAAGATAGGTATAAACAATAAAACATTGA 10479 28 100.0 32 ............................ AATTTTCCAGATGCTTTGAGGTCGTACAGTAG 10539 28 100.0 32 ............................ CTAAGGCTTTCAAGTGAACTGTCGCAAATACT 10599 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 6 28 100.0 32 CTTCCTCACCGCATAGGTGACTTAGAAA # Left flank : GCATGTGAAGCGCATCAATGAGGTTGGTGACAAAGCCAAAGGGCACGTTGTGATCAGACGCTACCGCCGTAAAAACGTGCTCAAGCAGGCTGAAGCATTCGCTGAGCACAAAGGCATTATGCTGGAGGCGGCACTGATACACTGCGCCAAACACAAGCAGGATAACAAACCCTATCCTTATATCAACTTAAGGAGCCTCAGCAACAATCAACCTTACGCATTATCTATCATTCAAGAAATGGCAGATAATGAGACTCAAGGGTCGTTTAACAGCTATGGCATTAACAATGCGGCAGATAAGGTTACTGTGCCCCATTGGTAAGCTACTTATAAGGTAATGACGAATTACCCAAAAATTGGGACAAAAAACCCTTTTTTTGAGCTATTTAAAAACTTTTAATAAAATCAATCAGTTACATTAGGGCGAAAAACGGAGGGTAAAACAGGGTGTTTCACTCTCCACGCCTTGTTGTAACTGAGTTTTTTGAGGTATAATCCCC # Right flank : TTAAAAGATTAAGCTCG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCCTCACCGCATAGGTGACTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched CTTCATCACCGCTCAGGTGACTTAGAAA with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.70,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [56.7-20.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 9932-12783 **** Predicted by CRISPRDetect 2.4 *** >NZ_FUGE01000244.1 Psychrobacter piechaudii isolate Psychrobacter_piechaudii, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 9932 28 100.0 32 ............................ GCTGGAAGCTAAGGTTGATCAGGTTATAAAAA 9992 28 100.0 32 ............................ AATAATTGACTTTCTCGATGAGCATGAGGGCT 10052 28 100.0 32 ............................ TATATATGCTGTTTACTTTTGTTGTGGTGATG 10112 28 100.0 32 ............................ ACACAGCACTATGGACACGCCGCAATATGCTA 10172 28 100.0 32 ............................ GTAATTGATGCACTTAGATAATGATAAGCTGG 10232 28 100.0 32 ............................ AATCACAGAAAAGCGGATATGGCATTTGGAAA 10292 28 100.0 33 ............................ TATCCTTATCTGTGCCGTTAATTATCTTACGGG 10353 28 100.0 32 ............................ CTCAAGAGGGAGAGGGTGATTGTAAAAAGATT 10413 28 100.0 32 ............................ AATAACAGTTATCCCCATGCTCAAGGGCATTG 10473 28 100.0 32 ............................ TCAGCGACCACATCTTGGCTCAACCTCTTGCC 10533 28 100.0 32 ............................ GTAACGGCGTGGATAGGACGGTAAGACTTGGC 10593 28 100.0 32 ............................ TCGCAGATTAAGACTTCATCAACTTCAAACAT 10653 28 96.4 32 .........G.................. TTTTCGATAAGTTGTTGCTCTTTGTCCAAGTC 10713 28 100.0 32 ............................ AATCACAGTGCGAAAGATTGATGATTATTACA 10773 28 100.0 32 ............................ TAGTGCGGTAGTAGATGGTGATGTATGAAAGT 10833 28 100.0 32 ............................ TGTTAATGAACCGCCGATTTGCTAATGCATCT 10893 28 100.0 32 ............................ AGTCTTAACTGCAATAGCATCAATACTACTGG 10953 28 100.0 32 ............................ CACCGGTCAAAAGTCATGGGTACTAACCCTTA 11013 28 100.0 33 ............................ TTCGCCTCCATCTCGCTCATTTCTGCTTCATAT 11074 28 100.0 32 ............................ ATGCCAACAATCTCACCGCTTTGGATTTTCTC 11134 28 100.0 32 ............................ TTGGCTTGCAGTGGGTGAGCAATGGTTTTACC 11194 28 100.0 33 ............................ CGATTTAGACCGTCTAGCGTGTCTATGTTGTTA 11255 28 100.0 32 ............................ ACTGCTTGATAGTAAAGGCTCGCAGTTGACTG 11315 28 100.0 32 ............................ TGGTAACGCTCACCCACTTTCTTAATGAACCA 11375 28 100.0 32 ............................ ATGTTCACCCCCTATGCTTCACATTTAGCGAC 11435 28 100.0 32 ............................ CCGAGTCCTCGGGCGTTTTGAGATTGCCGAGC 11495 28 100.0 32 ............................ TCGCAGATCAATAGCAAGATGCACGCAAGGAG 11555 28 100.0 32 ............................ TCGCAGATGCCAAACAGTTTGCCCCCTGAAAG 11615 28 100.0 32 ............................ TTTGACTGTTACGTCTCCTACCATCGCACCGT 11675 28 100.0 32 ............................ AACCAGCTAACACCCATTCAGTCATTACTTGC 11735 28 100.0 32 ............................ TTATACAAGCGTCAACGTACGACAATGAGCTT 11795 28 100.0 32 ............................ TGAGTTTTGGGCTGCTATCAATAAGATGCAGA 11855 28 100.0 32 ............................ TTGACGATGCCGTCACGTTCGTTTAATTGCTT 11915 28 100.0 32 ............................ TTATCTCCGTCTATCAATTCAACCGTTCATAT 11975 28 100.0 32 ............................ TTTCTTGAAGCAGCCATCGCGATTGTTTCTAA 12035 28 100.0 32 ............................ TTCGCGTTAAATTCGACGTCAATGCCTTCTTC 12095 28 100.0 32 ............................ AATGGGTGGCGCTTCAAGCCACGAATGGGTTC 12155 28 100.0 32 ............................ GCAACAAGAACACTTCAAAATTGGCACATATT 12215 28 100.0 32 ............................ TTTTGCATTGTGATAGCCCCGTCTTTATGGAA 12275 28 100.0 32 ............................ TGACTCATACTGAGTAGTGATCACGTCATTGC 12335 28 100.0 32 ............................ TATGATGAGTGGCTAAAAGACAATCCTATGCC 12395 28 100.0 33 ............................ GTCCTCGTAGTAAGCACGCTCAGATGGGTAAGT 12456 28 100.0 32 ............................ CACGCAAAGCGAACTGAGTTATCTAGCTTTTT 12516 28 100.0 32 ............................ TGATGATCTGTTAGTGCCATCTTTTATCCTGT 12576 28 100.0 32 ............................ TTTTGAGCCTGTTTACGAGCCTCAATAATGTT 12636 28 100.0 32 ............................ TTAAATGGCAGTTTTTGAAGCCTATCTACCTA 12696 28 100.0 32 ............................ TTAGCCCATTGCGTGAATTTAGCAGCGTATTC 12756 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 48 28 99.9 32 CTTCACCACCGCATAGGTGGCTTAGAAA # Left flank : GCATATCAAGCCGATTAAAAATGTGCCAAGTAATATAAAAGGCTATGTCAGCGTACACCGTTATCGCTTTAAACCTATCGAGGTGCAAGCGCAAAGCCTGGCTAAAAAACTGAATATTAGCTTGGATGACGCAATGGCAACGGTCGCTAAACGCACGCCTGAAAAGGCTGTGCCTTATGTTAGACTTACCAGCGAAACCAATAAAGCACCTTACTTACTTAAAGTGCTACAGCAACCCGCTGATGAACCTAAATCAGGACTGTTTAATGCGTATGGCATGAATGGCATGCGTGACAACGTGACTGTACCATTGTGGTAGGAGTGCGATCAAGCTGGTCATGATGAGTGGCCCAAAAAGAGGGTATAAAACCCCTCTTTTTGCACTAATTAAAAACTTGTAATAAAATCATATAGTTATGTTATGGTCAAAAAAAGAGGGTGAAATATGGCTTTTACCCTCTAGGCCATGTCACAACTCAACTTTTTAAGTTATAATTCCT # Right flank : ACTCGACTGCAACGATAGAGCTAGTGATTGTCGCAACCAATCAACTAGAAACAGTGGATGCGATGACAAGCTATGCTAAGCGTTGGGAAATTGAGACTTTATTTGCTTGTCTAAAGGGGCGTGGCTTTAATCTTGAAGATACCCACTTAACCCATCTTGATCGGGTCAGTAAATTAGTCGCAGTGAACGCCTTAGCATTTTGTTGGGCTTATCATGTCGGTATTTATAAAGACAAAAATAAGCCGTTAAAGCGCAAGTTAAAGGCAAACGCTCGACCTCAAGCCAGTTTGTTTGCGCTTGGCTTGGATGTGTTGATTGAGGGCCTTCGCTTGGTGTTCTTTAACAATGATAAGACTGTACTTCGACAGTTAGTTAGCTTTTTAACCCCTAAACCTATGAAAATCCGGTGGGGATGATTTTTTTGTCGTGTGCAGAGTATTCATTCTTAAAAAGCACTACTAATATTAAAGATAGTAGATTTTTTATTCTAAACTCATTTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACCACCGCATAGGTGGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTTCACCATCGCATAGATGGCTTAGAAA with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0.41 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 50-919 **** Predicted by CRISPRDetect 2.4 *** >NZ_FUGE01000186.1 Psychrobacter piechaudii isolate Psychrobacter_piechaudii, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 50 28 100.0 32 ............................ TGCTTAAAAATCACCAAACTCGCACCCAGATG 110 28 100.0 32 ............................ TTAATAGCTGACGAGATTAAAGCGGGTAAAGT 170 28 100.0 33 ............................ CAAGATGATTACAACCAAACTAGCCTACAGTGT 231 28 100.0 32 ............................ TGTAATTAGTTGTCTACCACCTAGTACTAGCC 291 28 100.0 32 ............................ TGAGATAAAGCAATGCCAAAGCTAATCGACAG 351 28 100.0 32 ............................ TAGTAGTGGTCTAGAGATATATGATGCTACTG 411 28 100.0 32 ............................ AAGCATATAATACATTAAGCCTGTCAGCATAA 471 28 100.0 32 ............................ TACCTAAGACGCACTGGGATGCTTATTAAAAG 531 28 100.0 32 ............................ TTAATGGAGGCAAAAGATTATGAGATATTTAG 591 28 100.0 32 ............................ ACAACCAGCCGATCGGAGAAGTTACCGAAGCG 651 28 100.0 33 ............................ TAGGTAAAATAACTAGCTTATATGTAGGTAAAA 712 28 100.0 32 ............................ CTGTTGTGTCATACACTGACTTACGTGATAAG 772 28 100.0 32 ............................ TAACGATGTGAACGGCACAAGCCCATTTATGG 832 28 100.0 32 ............................ TACAATACGCGTCTCTTTTGGCGTCAATGTCA 892 28 89.3 0 ....A.A..................C.. | ========== ====== ====== ====== ============================ ================================= ================== 15 28 99.3 32 CTTCCTCACCGCATAGGTGACTTAGAAA # Left flank : CATAGGTGACTTAGAAATCTAACTGTTGCCATTTTGGTCCAGTCACAATC # Right flank : ATGTCGCAAAAAGACTGACAAAGCGCTAAGATTTTTACATCGAAAAGAGTTAGTCAGCATAAAAAAACCAGACAGCCTAGGCCATCTGGTTATCAAGTAACATCAAATATCTATCTACCAACAGTAAGCTGTCCCCCAGAAAAGCTGATGCATCCATCACAAAACCAAGATTTTTGTTGTCTTGCATGGGGGATATCTGCTGGCACATCGAGTTGATAAGGACGACTACAATACTCGCAATGTATATCACCCAAATAAACCTGGCATTTTGCAAGCGTAATAAACAACTCATCAGACCTTATATTGTAATCGTAGCAAAGTATCTTTAGATGAGCGATATAGTCATTGGGTGATACATACGACCAATACTGATGGCACAAACGCTTTGCTTCATCATCTAGGCTTGAGTCGAACACAAAATTTACACACATGATATTCTCCTCGTTAGTAGCCATATCCAGATGGTGGTAGTAGCTCGTAAAGCTCACTTTGTAGCTGAC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCCTCACCGCATAGGTGACTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched CTTCATCACCGCTCAGGTGACTTAGAAA with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.70,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //