Array 1 69045-70994 **** Predicted by CRISPRDetect 2.4 *** >NZ_QXJC01000007.1 Simplicispira hankyongi strain NY-02 contig_7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 69045 28 100.0 32 ............................ CAAGTGGTAGGCGCCGTGAGCGTAATACCCGA 69105 28 100.0 32 ............................ TCAGTGCAACACCTTGGAAGCTATGTCTAGCT 69165 28 100.0 32 ............................ GTTGGCACTCGAACCGAGCCAGCATGGTTTCG 69225 28 100.0 32 ............................ GAATCGCCGTGAGTCACGGTTCGGCAGTCCAA 69285 28 100.0 32 ............................ GGCAAGTCCACCCTGGTGCTGGCCAATGCGGT 69345 28 100.0 32 ............................ AGTAGCCCACCCTGGCGCGGCGCTCACGCCAA 69405 28 100.0 32 ............................ GGAGTCGTAGTCTGTGGAGGTGTTGACGCGTT 69465 28 100.0 32 ............................ ACTGCAGCCTTGCCTTCGGCATCGCGTGCAAT 69525 28 100.0 32 ............................ TCAAGGGCAAGCTCGAAGGAGCAGCCGGCAGC 69585 28 100.0 32 ............................ TCAAGCAGTGAGCTTCGCAGCCGCCCAGGCAT 69645 28 100.0 32 ............................ GCCGAGGTCCGCCTGACGGACGAAACCGTCGA 69705 28 96.4 32 .........T.................. CAGTGGTCGTGGCGCTCAAAAGGTCTTGGAAG 69765 28 100.0 32 ............................ ATCAAAATGGCCATCGGGAAACGTCCTCTGAT 69825 28 100.0 32 ............................ TGAAGAAATCCAGTGGGTGGCTGGCAGATTCC 69885 28 100.0 32 ............................ AGCTCGGGCGACACCTGGCAGCACTTGATTCG 69945 28 100.0 32 ............................ GCTTCCGCAGCAGCAGCCAGATCAGCCGCAGC 70005 28 100.0 33 ............................ TCTGCGATCAGGTCGTCAGCCACCGCGTCACGC 70066 28 100.0 32 ............................ GCCATGCTCGCCCTTGCCAACCCCCTCAAAGA 70126 28 100.0 32 ............................ ATACAGCCACGCGCCTGGGCGAGCATGACCCC 70186 28 100.0 32 ............................ AGGAGCGCCAGACGCCGCAATACACCACGCGC 70246 28 100.0 32 ............................ CCATTTTCCCCGTGCCCGTGGGTCACGCCACC 70306 28 100.0 32 ............................ AGTACAGCGGGTCGCCCGTGCTGATGGCGAGA 70366 28 100.0 32 ............................ AGAGGAAATATTCTGGAAGTCCTGCGCGTACT 70426 28 100.0 32 ............................ GAAAGGCTGGCGATGTGCATCCAGGATCTCCC 70486 28 100.0 32 ............................ GAACACTGCGCCTGGTTTGATGGCGTTTGCCA 70546 28 100.0 32 ............................ TTCATCCCCTCTGTTTTGGCATTGGATTCGGC 70606 28 100.0 32 ............................ TACGGGCAAGACCCGGCACCTTTTCTCAACTT 70666 28 100.0 32 ............................ TGAAGAAATCCAGTGCGTCGCTGGCAGATTCC 70726 28 100.0 32 ............................ CGCGAGCTTGGCCTTCTCTGCCGTGCTGTAGT 70786 28 100.0 32 ............................ AGCAAGGCGGGCGCGGCTGGGAGCCGCTGCGC 70846 28 100.0 32 ............................ AACAACCCTCAAGAAGCAGAAAAACTGGCATT 70906 28 100.0 32 ............................ CAGCGGAAGCCTGTCACTGCCCGCGCCGATGC 70966 28 78.6 0 ............A.....T...A.TCC. | G [70987] ========== ====== ====== ====== ============================ ================================= ================== 33 28 99.2 32 GTTTCCTGCCGCGTAGGCAGCTCAGAAA # Left flank : GCGGCGCTGGAGCAATTGATGGCACTGGACTGGTTGCACGGCATGCGGGACCACACGCAGGTCGGCACTGCGGCTCCGGTTCCCAAGGGCGTACCGCATCGCATCGTGCAGCGCCGCCAGTTCAAAACCAGTGCAGAGCGCCTGCGGCGCCGTCGCATGCGGCGCAAGGGCGAAACGGCTGAACAAGCGGCTGTCGCCATCCCTGATGAGGTAGAGCGAAAGCCCGACCTGCCTTATGTGCAACTGCGCAGCAGCAGCACTGGTGAGCCGTTTTGCCTGTTTGTAGAACATGGAGACCAGCAGCCGACGCCTACGCCAGGTCGGTTCAATAGCTACGGCTTGAGTTCGGGGGCAAGTGTCCCCTGGTTTTGACCCTTTTTTGGGCTGTTCCACAAGCCCCCAATAAATCAAGTAGTTAGCGGCCTTGTGGTGAATTGGGTGTAGACGCTGGAAATCGTGTTGTTCCTTAAAAATCAAGTATTTTTTGGAGTTATGGTCTA # Right flank : AGCTCTTTCGACCAAGCAGTCCAGTACCGCACACAGCATGACTGCTGGTCTTGACCGATGGTCGCGTCTTTTTTAGTGGATTTTCAGGAACTCACTGTGGATAACCATTCGCGGCCACAACGATTGTGGATAACTTGCTTGCCGCATTGACTTGAAGACGCAGCGGGTCCCTTGGTCCACTCCATCCAGCGGGCCTGCGAGGGAGCTTGAGAGATGTCTGCGCTGTAAATGAACTTCGGTCTAGACAGAAGCCTACAACCAGAACCCACGCTTGTTCACATTGGCAAGCAGCGCTGAGAGCGCACTGAGAGCCTCCGAATCCAGGATCTTCTCGGTTGTGCCATTGAGGGACGTTGGCAACTGGCTGCCGTGGATTTCCTTTGACTGCTTGAGAACCAGGTCTAGCAAACTGCTTCTTGGGAGGAGTATGTAGTGCACCTCGCAGTCCAAGCCATCAGCAAGCTTGGCCAGCGTCTTCAAAGAAATGCTTCCGTTTTCTT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCTGCCGCGTAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCGCTGCCGCGTAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 95773-96401 **** Predicted by CRISPRDetect 2.4 *** >NZ_QXJC01000007.1 Simplicispira hankyongi strain NY-02 contig_7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 95773 28 100.0 32 ............................ AAGACCAGTTGATCCACCATCAACGATGGTTC 95833 28 100.0 32 ............................ GTTGCCTGCGGAAATCTGCAATTGATTTGCCG 95893 28 100.0 32 ............................ TATTGCCGTTCGAAAGCGGGGATTGCATGAAT 95953 28 100.0 32 ............................ TGCAAAAGCAGGCCACGGAACACGCCGGCCGC 96013 28 100.0 33 ............................ TGCATCATCTTGCAAGTTGGCGATGCCTACAGC 96074 28 100.0 32 ............................ ATCAACGCGGTGGACATTAGCTCCACATTCAG 96134 28 100.0 32 ............................ TGTGCTGTCGGGATCACGCGGACTCAAGAAGT 96194 28 100.0 32 ............................ GTGAGAAAGCAATGCGTTTGGGCGCTAGGCAC 96254 28 100.0 32 ............................ AGGGCAGAGAACGCGTCTGGGGTCATGGATTG 96314 28 100.0 32 ............................ TGCATGCTTAGCGTGACGTGCTCTTGTGTGCC 96374 28 96.4 0 .............C.............. | ========== ====== ====== ====== ============================ ================================= ================== 11 28 99.7 32 GTTTCCTGCCGCGTAGGCAGCTCAGAAA # Left flank : ACGAGAAGGCCTCGGGCCTGCTTGTCAGGATCTAGCCTTGCTCACGCGCCGCAAAGCAGACGCCGATGGACTTCTGCAATCAGCCTGATTCGGGCTTTGACTTGACTCGGGTAGAACCAATGCATGGCAGCCCCCTACATGCCTGCCTGATACGTGCCAGTCGAGTGCGCCCAATCTCATAGGCAATTGAACGGATTTGCGGCAAGTTTGCCGGGCTCAATGATCAGCCAAGCCCCCTACCACCTGTCGATGGCAGTACGAACAGCATGCGACCTAGCGCGCCTCTGTTCTGCAAGGTAGCTTTGTGGGGATCTGATGTTTGTCGGCGGGGGAGTCGCTCCTACGCCGAGCAACTCCGATTGGCACTGGGCCCTGGTCCGGTCGGTCAAGTAGATGTGGCGCGTGTGGTCACGTTGCAGTGGACTCGGTGGTCAAGTGCATCTGGTTTTCGCATAGGCAGCTCAGAAAGTCATGGCATCCCCGCTTTTGAACGACACAGG # Right flank : AATCGCCTCGAACTGGGCGACGGCGGACACCGCGTTTCCTGCCACCTAGCTCCAGCGTTTGAAGGAAAAGCGCTGGCAGTGTTTTTATTTCTCGGTGCGCTCTGCTTCCTCCGCCGCGTGGGCCCTGGCGATGGCCAGGATTACGTCGCGCGCCAGACGGCGTTTGGGTACTGGAAGGCGCAGATAGATTTCGAACAATTCGCGATCCGGGTAGCCTAGCCCGGCATGCCAGATGGGTTGCCGTTCGCGTGCCTGGTGTGCTTCGCCTTCGCCATAGCCCAACTCCTGCACAGGCACGCGCAACCAGTCTGCCAAGGTGACGAGTTTCTTGTGGTCGGGCATGGTTTCCCCCTGCAGCCAGCGCCGAACGCCGTGCAGCGTCATGGGCTTGCCCCAGTGGCGCATGTTGAATTCCCGCTCCAGCACTACCGGCCTTGGTTCGTAGCCGGCTGTCACCATTGCACCGCGTAACCGTCGCGCAAATTCTTTCTTGGCATCGT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCTGCCGCGTAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCGCTGCCGCGTAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //