Array 1 1521953-1520337 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP023392.1 Streptococcus suis strain DAT300 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 1521952 32 100.0 34 ................................ ATCTAAAAATTTATTTTTTACACTTTCAAACATT 1521886 32 100.0 34 ................................ AATCGAAGAAAATACAGAAAGTCCATTGTAAATT 1521820 32 100.0 33 ................................ ATTACTCTACATCCAAAACCGTCACTCTCAATA 1521755 32 100.0 33 ................................ AATGTAAAAACATCCATCCCTGTAAACCACTAT 1521690 32 100.0 35 ................................ ACAAAATGAGGTAATAAAATAGAATGGAATATACA 1521623 32 100.0 34 ................................ GGAATGAGTATCAATTCAAGATTGTGGTTAATGT 1521557 32 100.0 34 ................................ ATCTTTGATTAATAATTATCTTGATGAACCTCAA 1521491 32 100.0 34 ................................ AAGATTTTAATATACCAATATCTTACGATATAGA 1521425 32 100.0 34 ................................ ATTTGTGTATTTACTGTCCACATATCTAAATTAC 1521359 32 100.0 36 ................................ TCGATAACTTGCTGCTTATTCATCTGTTTCCTCCAA 1521291 32 100.0 34 ................................ AAAATCTTTTTGTGATGGTGTAGAGATTACTAAA 1521225 32 100.0 34 ................................ CATCAACATCTACTACAATTGCTGTGTGTCCCTC 1521159 32 100.0 34 ................................ AACAGGCAGTTAACACCGTTAAAAAATGGAGGGA 1521093 32 100.0 35 ................................ TATTTCCAAGAATGACCGAGATGCTGAACTTGCCT 1521026 32 100.0 33 ................................ AAAGACATCAATGTTGGTAATGCGACGATTAAG 1520961 32 100.0 34 ................................ TTTAGGATTGACCAGCGTATCGTTGACCTGCATG 1520895 32 100.0 36 ................................ AAGAGAGAGTCTGGATTTCCATAACGTCGATATAAA 1520827 32 100.0 34 ................................ TCCTGGAATCAGCGTCCTAGCTGCAGTATTTCCG 1520761 32 100.0 34 ................................ TCCTTTGATTAAGCTAAAATTGTGATGTTGTCTT 1520695 32 100.0 35 ................................ TTTGTTTGCTAATTCAACTGCATACTCCAAAGCAT 1520628 32 100.0 33 ................................ AGTCTGATAAGCACGCTATCGCATGGCATATTC 1520563 32 93.8 34 .............T........A......... AACGTATCGACAGACTACCTGCTCGGACGGACCG 1520497 32 87.5 33 .......T..T...AA................ AGGGCATTGAGCTGTTCTTGGGTCAATGCTTGG 1520432 32 84.4 32 .......T..T....A.....C..G....... TGGACGGAACTATGGAAACACCAGGCACATCG 1520368 32 68.8 0 ....T..T..TTG..TA.A...A.G....... | ========== ====== ====== ====== ================================ ==================================== ================== 25 32 97.4 34 GTCGCACCCTACACGGGTGCGTGGATTGAAAT # Left flank : CAAAAGCTATTCGAGGCGAGTTGGATAGCTATCCTCCCTTTATGATATAGGGGCTATATTATGATGGTATTAGTGACCTATGATGTCAATACAGAGACAGCAGCTGGACGAAAGCGGTTGAGAAAAGTAGCTAAGCTGTGCGTTGACTTTGGTCAACGTGTGCAACATTCTGTTTTCGAATGTTCAGTCACTCCAGCAGAATTTGTTGAAGTAAAGAATAGATTATTGGAAATCATTGACAAGGAACAGGACAGTATCCGCTTTTATATGCTAGGAAAAAACTGGCAAAATCGTGTGGAAACGATTGGGCGAGATACTAGTTATGATCCAGATCAAGGAGTTCTTCTGTTATAGATTATCTATGCGAATCGGACTTACTCATTAAATGTGAGGAGATTCGCGTGAAAAGCATATGAAAAAAAGTGAAAATAGAGTGAATTTATGGTATATTCTATATTTGTAGAAACTTTATTTTTTACAAAACAGTGTCAAAAGGCACT # Right flank : TGTTTTTTGCTTAACACAGTATATCTGGTATGGACGTGTTCGAAGTTTCCCTCCTTTAACTCATCTCCCCCACAATTTTCTAAAATTCTTGTTTTGTCTTGCTTGCTTCATGCTATAATAGTTGTATCAGTTTTTTAAAAGGAGACAAAGATGACAAACCTAAAAGAGCAGGTTGGGATTAAGGCGGCGGAGTTCGTGACGGACGGGATGATTGTTGGGCTGGGAACTGGTTCGACGGCATACTATTTCGTGCAGGAGATTGGTCGCCGGGTTGCAGAAGAAGGGCTACAGATCACAGGCGTAACGACCTCTCATGCTACGGCAGAACATGCTGCGTCCCTTGGGATTCCCCTAAAAAATATCGACGAAGTCGAATACGTAGACTTGACGGTGGATGGGGCTGACGAGGTGGATGGTGCCTTCAATGGTATAAAGGGTGGCGGTGCTGCACTGCTCATGGAGAAAGTGGTAGCAGTCAATAGCAAGGACTGCATCTGGAT # Questionable array : NO Score: 9.13 # Score Detail : 1:0, 2:3, 3:3, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCTACACGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.70,-4.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [21-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //