Array 1 147358-152916 **** Predicted by CRISPRDetect 2.4 *** >NZ_KK074151.1 Legionella pneumophila subsp. pneumophila strain ATCC 43283 Scaffold3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 147358 28 100.0 32 ............................ ATTTACACGCCAGAGAAATTATATAAAGTCAC 147418 28 100.0 32 ............................ TATTCAGAAGAAAGAACTTACGAAATTATTGG 147478 28 100.0 32 ............................ ACATCTCTTTAAGATCAAGAACAGTGTCCCAT 147538 28 100.0 32 ............................ ATTCGCTAAATTTAAAAACATATAAGACATAT 147598 28 100.0 32 ............................ TATATAATCCTATTACAGTAGCTTTATATGTA 147658 28 100.0 32 ............................ TAGATAATTACCTCTCTCAACTTGCTGTCTTT 147718 28 100.0 32 ............................ AAAAACTTTCATTTGTTAGATTACGCATCTCA 147778 28 100.0 32 ............................ ATTATCTGTTACTGGATTTTTGAATATCTCTA 147838 28 100.0 32 ............................ TCATTCAGATGTAGCCTCAGCTTTAATAAATA 147898 28 100.0 32 ............................ GTCATCTTGAATAGACATTTTAACAGTATGTA 147958 28 100.0 32 ............................ TAAAAATAATAAAGTTTCCATTTTACTTGACT 148018 28 100.0 33 ............................ GCACATAGTGAGAACATGGAAATATTTAATATG 148079 28 100.0 32 ............................ ATCGTATTGTGTCTCCCAATAAGTAACTTTTT 148139 28 100.0 34 ............................ TGACATATAGATTTCGCAGCATCAGCATAACTTT 148201 28 100.0 32 ............................ TAACACTTTAACCATTCTTTCCCACGCATCTG 148261 28 100.0 32 ............................ ACTTCCTGCTTAGGTCGAGCAAAAAAGTTTTG 148321 28 100.0 32 ............................ CCACAGGTATTGTTTCAATTGTATCGGACACG 148381 28 100.0 32 ............................ TTGCGAATAAGATGCATCATAAAACTTGCCTG 148441 28 100.0 32 ............................ AAATCCTCACTTTTCAATTTCTTATTTAATAA 148501 28 100.0 32 ............................ TGAAACTCACCATTTTTTAATAAAGGTTGGTT 148561 28 100.0 32 ............................ TAAAAAGCATGTTTTGTTAAAATGAGGAGATA 148621 28 100.0 32 ............................ ATTTGCATAACCAGTATCCGCAGGACTAGTCA 148681 28 100.0 33 ............................ CGATTGGGTAAAAGAAGTACCAGAAGGCTATCA 148742 28 100.0 32 ............................ TTGCAGCCAAATCAAATTTATTATCGTGAGCC 148802 28 100.0 32 ............................ GCATGGGCACCGAAAGGAACAGCAGACATTAC 148862 28 100.0 32 ............................ TATAAGAATTACTGCTTTAGCCCAGCTTATTG 148922 28 100.0 32 ............................ TAAAAGATTTTTATGTGGTAACTGTCATTAAA 148982 28 100.0 32 ............................ GATAATGGGTTTGCTCGAAAAGAAGATAATGC 149042 28 100.0 32 ............................ GGAAAATTGTTCCAGCCTCTTCGTTTCTAAAA 149102 28 100.0 32 ............................ GTTACCGCAGCACCTAAATTGAATTCTTGTTT 149162 28 100.0 32 ............................ TACGCAGGTTGCTTCTTTGGTTCATAATAGTC 149222 28 100.0 32 ............................ TAAAGTAGCTGCCAGCATAGGATTAATACCCG 149282 28 100.0 32 ............................ TGATGATTCTACGGATTATTTAGTTCCCACGA 149342 28 100.0 32 ............................ TATTACTGAGGCGGGGAAAAGATAATGGCAAA 149402 28 100.0 32 ............................ TATCGCGTTTATTATGTGCACTTTTTCAAACT 149462 28 100.0 32 ............................ TAACGTAGACACACTAATAAAAGCAGGTAAAA 149522 28 100.0 32 ............................ AGATCCGGGCGGAGAAAAAGGAGCTACTAAAC 149582 28 100.0 32 ............................ AATTCTCAGAAATAAATAAATGTTTATTTATA 149642 28 100.0 33 ............................ GGTAGACACTGGCCTTTTTAAATCCAATTGGGT 149703 28 100.0 32 ............................ ATTAAAAGCCTTGCTGCTGCATGTAGTCTATG 149763 28 100.0 32 ............................ AAGAAACCGGGGAAGTGAACGACGCATATCGC 149823 28 100.0 32 ............................ TGCTGAATTGCGCGTGAAATTCTTTCTGATAA 149883 28 100.0 32 ............................ AATCCTCAGCCCAATGATTTTCAGCATCAATT 149943 28 100.0 32 ............................ AATCACAAGTTTACGCCCACCTAAAGTTTTTA 150003 28 100.0 32 ............................ TATGACCTCCAATCTTCTTTCATGGTCATTAT 150063 28 100.0 32 ............................ TTATGATACGCAGGGCAATATATTGCGTAGAG 150123 28 100.0 32 ............................ TTGGGAAAATTCCCATATTGCTTTTGCACCAT 150183 28 100.0 32 ............................ AGCGTGACAAATTAATCAATAAGTACAATAAT 150243 28 100.0 32 ............................ TTGAAGAGTACATTGGATATTCAATTAGTGCT 150303 28 100.0 32 ............................ AATATGGATAAGGCTTAAATGGTCTGGTGCCC 150363 28 100.0 32 ............................ TTAGGGGATTGTATCGCCCCTGGCGACGGATA 150423 28 100.0 32 ............................ ATCATACTTCTTTTATCAACTTTTTGTGTTGC 150483 28 100.0 33 ............................ ATTATGGATGCTGTTGCAAAAGGCGAGCTCACG 150544 28 100.0 32 ............................ GCCTAAAAGCCGAGGCGGACGTGAATTTTTAT 150604 28 100.0 32 ............................ AATTAATGTTAATCCTGTACCTCAGACTAGTT 150664 28 100.0 32 ............................ AATTATCCCAAACAAGACGATACGGAACAGCA 150724 28 100.0 32 ............................ GCTTGCGCCATGCGCTTAACTATTGCCCTCTC 150784 28 100.0 32 ............................ ATACGCACAGCTTAATGAGTGTTATTGGCGCG 150844 28 100.0 32 ............................ TACAATCTTGTTTAATGATGAATTAGTCAATG 150904 28 100.0 32 ............................ TCTATCGTTGGCCTATGTCTTCCGTTAATCAT 150964 28 100.0 33 ............................ TTACAACATCGGCCGCCGCGACGGGAACAGTTC 151025 28 100.0 32 ............................ TATGAAAACGAACGACGTGAAACAGCGTAGGA 151085 28 100.0 32 ............................ TTACCACTTTTGGTATCATCATGTATCTGGAT 151145 28 100.0 32 ............................ AATAGAGACAGCCAAAAAGAACTGAAATTTGA 151205 28 100.0 33 ............................ AATACGGCGAAATAGACGAAAGTATAGACTTGA 151266 28 100.0 32 ............................ GTCTTCGTGTGTAACCTCGTCTTTTTCGTCCT 151326 28 100.0 32 ............................ CTATGAAGACGGTCTGCACGGAGAACTCGTTA 151386 28 100.0 32 ............................ TGTAGCGGAATCAACGCCGTACGCCTCTGGTA 151446 28 100.0 32 ............................ GATCAATCAGATAATCCACAAGACTACATTCG 151506 28 100.0 32 ............................ TACGCCTCCGCTTGACGACTTTAAGCCCAAGG 151566 28 96.4 32 ....................T....... TTATGTGCAAAAGGGCGGTAAGGCATGGCAAT 151626 28 100.0 32 ............................ GCAACAAAAATGGCGCTAGAGGGCAACGAAAA 151686 28 100.0 32 ............................ TATCGTCAACAGAGTCAAAGTATCGCCAGCAG 151746 28 100.0 32 ............................ ACTTACCCCTCCAAGGGAGGTGGTGCGGACTC 151806 28 100.0 32 ............................ AGCGCGTAAAAATCCTATCGAGAGGTCAAAAG 151866 28 100.0 32 ............................ GATAACTGGCAAGACACCGCTTTTGCGTGGCG 151926 28 100.0 32 ............................ TTACTCCCAGCTCAATGAGTGCTACTGGAGGG 151986 28 100.0 32 ............................ GCTCTTCGATCGTCGGCCTATGTCTTCCGTTG 152046 28 100.0 32 ............................ TTTGCAGCTCGGACATCTAATCATTTCCGTCG 152106 28 100.0 32 ............................ TGTGCTAAAAGTTCCGTTTGCTGTTGCTTTGC 152166 28 100.0 32 ............................ TACCAAGGTATTGCTGAAGCAATGGCCACTCA 152226 28 100.0 32 ............................ TTTTTCTCCGGCGGAATCTGGATCAAGCCATA 152286 28 100.0 32 ............................ GAACTTTCTGCTAGCAAGTCGAGCGATATAGA 152346 28 100.0 32 ............................ TCACGGTCTATTGTGTCGCCCTCAATTTGTCA 152406 28 100.0 32 ............................ TATGTTCAGAACCAACTCACGAATATCTCTCT 152466 28 100.0 32 ............................ AACGGCTTGAAATAATCCTTGGGCATGCTCGG 152526 28 100.0 32 ............................ TCTTCTTGCTCTTCAACAGCTTGCTTAGTCTC 152586 28 100.0 33 ............................ ACTGATTTAACAGCACAGATGGAAGCATTGAAA 152647 28 100.0 32 ............................ TCTCTGTAGTTTTGTTCAAAAACAGGGTATGT 152707 28 100.0 32 ............................ AATACATCACCAATTTGAATATCTCTAATCGT 152767 28 100.0 34 ............................ ATTTAGACGAATTTGTCGCGGCCGATTTAAGTAT 152829 28 100.0 32 ............................ AAGTAAATCCAGACCAGATATACATTCTTATC 152889 28 67.9 0 .............T......TGGGTTGG | ========== ====== ====== ====== ============================ ================================== ================== 93 28 99.6 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : CGGTGTCTCGTAAACAGCCTACAATGAGCCAATCAAAATTGAGGCGGTTAATTAAACGTAACTCCTTGACAGAAGATGAAATCAGGCAATACAAGGCAAAGATGTTTTCCAAAGGTCTGGATAATCCATATATTGAACTTGTGAGCGTATCAAACGGGCAAAGACACCGACGCTATATTGAGTTTGGCGAATTGTTCAATGAGCCAATTACGGGCCTCTTTGATCAGTTCGGCCTTTCTAACAGTGCTACTGTTCCATGGTTTGATTAAATTTTAGAACAAGGTAAATTCCTTGAGTTCGATAGGTTAAAGTAAGGAGATATAGTTTGGTCAAATGCTTCAATACTTGATTATTTCGATACTTCTAACGACCAATAAATTTAGTTCTTTAAAAATTTGTCTTAAAATCAATTGGTTATAAATTAGCTGAAAGATATTGGGTAAATCGATTTTTTTCAGCTAACTTTCTGTTGTAACTATTTTTTTAAGATTTATATTACA # Right flank : GTATTGGTTAAGTCGTATAAGAGGAGTTAAATCGGTATAATTATCCGAAGAACTGGGATGGAAACTCATTAAAGAACTAATCCCTGATATTAAATCTAAAACGGCACATTATGAGCATGCGCTATTAACCAAAGGGCATGCAAGACCCTGTAGGGTAGTTACAACTTATCGTCAGCCCAAAGGGAGAAAAGTAAAGACATCACGAGGAAAAATACCTCAACATTATCCAATGGAAGTTATAGTCAAGCGAATAAGGAGCCTTGGATTTTAGCTACTAATTTACCCTTGGATGTAGGGCCTGTTGATATTATCAATCTCTATTTTAAAAAAATGCAAATAGAAGAATCATTTAGAGACGTTAAAAGTCATCAATTCGGACTGGCGGGGCGGTATCTGCGTACTCATTCAGTTAATAGATGGGGCGTTAAAATGCTTCTTGCTGCTATTGTGGAAATTACTTATTGGGTTATTGGAGTGATTGCCCATAGTCAAAATAAACA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //