Array 1 23028-22661 **** Predicted by CRISPRDetect 2.4 *** >NZ_MOEN01000025.1 Desulfurobacterium indicum strain K6013 contig25_length_23131_cov_247.52, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 23027 30 100.0 39 .............................. GAGCTATGGCTATTGGTGAGGTTGGAGCTTCCGGGCATT 22958 30 100.0 35 .............................. AATAACAACATTTTATTAGACATTACATTTTTATA 22893 30 100.0 37 .............................. ATTTTCTTGAGAGGAGGTTGCCATGGCAGACGACAGA 22826 30 100.0 38 .............................. AGCCACCTTTGTAAATCAGTAGTAACTTTGCTATTTAA 22758 30 100.0 38 .............................. CGGGTGGTTGGTGAGTGTAGGTGGTTGGGTATTGGTGA 22690 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 6 30 100.0 38 GTTTTAAGCGTACCTCTAAGGAATTGAAAC # Left flank : TGAGGCTAAGGAAGAACTTCAGGATATGTTCTCCAGGAGGTACTCCTAATGGTTTACACAAAATTATTGACACAACCTTGAAAAAAGAATAAGTTTTAAGATA # Right flank : ACAAAGTATTGCACATATCAAGCATTTGCAGAGGAAATCTTTTCATATCAGAGAAACCCCTACTTTGCGTCCTATTTTTTTCTGTAAAAATTCATTCAACGTAGCCATTTCAAAAACATCTTTTGGGTGTGGTGAGATTTCTACTATCATAGCCTTTTTATAAGTTGGAGCAAATGGAGATATAGCCATCTGGACTTCTTTAACCTTAAATCCTTTTTCTTTTAAAACCTTTAAAGCAATTTCATAAGCTCTTTTAAGGTCTTTATCCTCTACTGTGGCAGGATTCTTAATAACCTTCATTTCACACTCCGGCATAAGATTTCACCTTTCTTAAATAAGTATATGCCCTTTTTCCTCTTTTGACATTTCCAGGACCAAGATGATAGGCTTGTATGGCCAAGTCCCAATCCTTGAATATTTTATACATTTTGAGAAGGTAGTGGCGAGCAGCTTCTCTTTGTTTGTAATTTTGTTGAGCGTTTTACAGCTTCCCTGTCCAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAAGCGTACCTCTAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [63.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.77 Confidence: HIGH] # Array family : NA // Array 1 15511-15746 **** Predicted by CRISPRDetect 2.4 *** >NZ_MOEN01000036.1 Desulfurobacterium indicum strain K6013 contig36_length_16201_cov_152.446, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 15511 30 96.7 41 ....................A......... TAGTTGAATATCTCTTTTATTGGCATTTCTTTTTAGGTTTT 15582 30 100.0 36 .............................. AGGAAAAAGAAAAATAACGAAAGGAAGGCTACAAAA 15648 30 100.0 39 .............................. TGGCCAAAAGGCGCGCGTCGTAATAATCGTTTTTTCTTG 15717 30 96.7 0 .....G........................ | ========== ====== ====== ====== ============================== ========================================= ================== 4 30 98.3 39 GTTTTAAGCGTACCTCTAAGGAATTGAAAC # Left flank : CATGAAAAAAACAGCCCTTTTAGGACTGGCACTTATCAGCATTGCCGCAGCTGGCTGTGGACAAAAACAAGAAACCTCAACACAAGCAACACCTGAATGGAATGCGAACTGTGCCCGTTGCCACAACGGAAATATGGCCGTAACAAAAGACACAATCCTTGCAAAATACAAGGATAAGACACAACTACTTAATGCGGTAAAAGAACTTGTAAGTGCCGGCAAAATGCCGCCTAATCTTCCATACGGCAAAGTAGCAGACGAACTCTACAAATAAACAACGAGCCGGCAGAATTCTGCCGGCTTCCCATTCAAATTATCGGGAATCAACTTTCAGAACAATACAGTCAAAGCATCTTAATACCAATAGTTTTAAAGTTATAAATCAAATATTCATAACTATCTTAATCACGATCCCCGACACTTGACACCCAATATTAGCTGATGATAATATTAATATAAACCTTGACGCTCTTTGAAAAAAGAATAAGTTTTAAGATAGG # Right flank : TAGAATTGTGCAACGCCGAAATCAGCAAAGCCATAACCGGGGAAATACTCACAGCAGACAAAGGAAATACTGGAAGTTACGCCCTTGCTAAAGTTCATTATGAAACACTAAAAAAACGAGGTAGGAAAGTAGCTAAAGCACTTGCTAATACCCTAAACCGTACCCTTATTCGCTGGATAGTGGAACTTAACTACGGTAAAGACCTCCTTCACCTAACACCAAAACTCCAGTTTGATTTCAAGGAAATTCCGGAGTGGGAGCAGGTGAAAGATGCGATTGATAGGGGAGTGCCGGTAAGTAAGGAAGCTCTCTATACCCTCTACAACTTGCCTAAGCCTCAAAACGAAGAGGACGTGTTCGTTTCCCCAAAACTCTCTCCTCAAGGAGGTATGGACTTCTCAGATTTTTTTACTTTGCCGAGAAGGGTCAAGTTGAAGCCGTAAACGACGTAACAG # Questionable array : NO Score: 8.77 # Score Detail : 1:0, 2:3, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAAGCGTACCTCTAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: F [75.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0 Confidence: HIGH] # Array family : NA // Array 1 103556-104189 **** Predicted by CRISPRDetect 2.4 *** >NZ_MOEN01000001.1 Desulfurobacterium indicum strain K6013 contig1_length_132254_cov_514.356, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ============================================ ================== 103556 35 100.0 44 ................................... GAGATTAATTTCCCCCTTCTCTACGAAGAGAAGAAGGAATTCTT 103635 35 100.0 37 ................................... TAAGGACGGATAATAGTTTTTTATAAAACCTTCAAGC 103707 35 100.0 36 ................................... CAAGGGATAACCTTCTTTATATACAGTTATCCCTTT 103778 35 100.0 35 ................................... AGTTTTGCCTTTACGGTATGAGACATTTTTTTCTC 103848 35 97.1 41 ..............G.................... CTCTTCCAAATCCTCCTCCTCCTCTTCTGGGGGGAGGAGAA 103924 35 100.0 43 ................................... CGCGGGGTTCACTACGCTTAAAATGATGCTGCCGTCCTCGCTG 104002 35 100.0 44 ................................... TTTTAAGTCTTACTGGTATAAATACGAATATATCCTTGTTCATT 104081 35 100.0 40 ................................... CGGTCACTATAGGATGTTGAAGACCAATATTGGTCTTCCA 104156 34 82.9 0 ...........................-..ATTTG | ========== ====== ====== ====== =================================== ============================================ ================== 9 35 97.8 40 GTTGAAATGCCCTTAAAAGTGAGAGGGATTGCGAC # Left flank : CGATAGGTGCTTTGAAAATAGACATGAAGTTAAATCAGCTTGAGCCTGTTATTGAAACCGTTATAGATGAAAGAAAAATAAGAATAGACACAAAAATGCCTCAAAACTTTTTCCCTGAAATTAAACTACTCGGGATGAGAGGAGATGAAGCGCTTGATGCTGTTGAAAAATTCCTTGACGATGCAAGAATTGCAGGATTTCACAGGGTTAAAATCGTTCACGGTCATGGAACAGGCATTTTAAAACGGCTTGTTCGGACATATCTGAAGGATTCTCCTTATGTTAAATCATTTCGTGCTGGAAAAATAGAAGAAGGTGGTGACGGCATTACGATTGTGGAGTTGAAATAGTATAATAGCTGTGATCTTTTACATCTGAATATGCAAAAAGGTTTTTTAAAAGTTGTATGTTCAGAGATACTGATTTTCAATGAGTTTTAGATTAGTATGAAAGACTTAACTTTCGAAACCTTTGAAAGTACATGCCTAAAATTCGGTGCA # Right flank : GTCATCCTGAGTGAAGTGAATGGTAGGCAAAAATAAAGAAAAGGGATTTCTGTAAATTTTTACAAGTGTTATTTGATGTACGATGGTAGATAATTTTAAAAAACTTGAAATTTTTTCGCCGGAAGGTTAGCGGGATATATTATTTTTTTACTGGATAGTTTTAAGTTTATTCTTGGTTGAGACTGTTGATTTTTCTACTCTCAGTAAACTTTTACATCCAGGAAGTAGCTATAACGGATTTAATTACCTCCCATTTTTCTATCCATTATTGTTCTTGCTAATGCTGCTTTCTTTAGTAGAAAACAAAGAACTAAAAATGTCATATTTTTCTGATTATCTGTTTGGCGTGGTGATTGCTTTTCTGAAAGTTGTTTTATAATTTTTGTTTTAAGTTTTAATTTCGGGAATTTGATGAAATCTAAAGGTTTTCTTGAGATGTTAGGGGCTACTTCCATATGGGGCAGTGTTCCTCTTATGGGTATATGGTCAGGGCTGCCGAG # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAATGCCCTTAAAAGTGAGAGGGATTGCGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.29%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.30,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 26391-26134 **** Predicted by CRISPRDetect 2.4 *** >NZ_MOEN01000018.1 Desulfurobacterium indicum strain K6013 contig18_length_29271_cov_921.014, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== ==================================================== ================== 26390 27 100.0 49 ........................... ATTGCGACCTTTGGGTGCCGCTTTGATGTTTAACCAAAGCGGGACAAAA 26314 27 100.0 52 ........................... ATTGCGACTCTGGTTGGAAAAATAAATTTCCCCTATATAATTTTTTTCAATT 26235 27 100.0 48 ........................... ATTGCGACCAAATTTCTTCTAAAACTTCTATGTTTATATTTTTCATTT 26160 27 100.0 0 ........................... | ========== ====== ====== ====== =========================== ==================================================== ================== 4 27 100.0 50 ATTGAAATGCCCTGATAAATGAGAGGG # Left flank : TTGAGAAATTCGGTGTTGTTAAAGAACTTAATGAGAGCACAGTGCTGTGATGGAAAAAACAAGGATAATCAAATACCTGGCAGTTTACGATATATGCATAAAGGACAATACACCAAAAGAGATAAGGCTCTCTGCTATGAGACGCATGAAATTAATGAGAATTCTATATTCTTATGGAATAAGAACTCAGTTAAGTGTGTTTGAACTTGAACTTTCCCCTTCAGAAAAAAAAGAGATGATAAAGAGAGTAAAAAAATATTTAAGACAAAACACGGATAAATTTTATCTGTATCCGATTGACGCAAGAAGTATTGAGAGTATAATTAGAATAGGTAACTATGACAATACGATACTAAAGGATTATTTCTTTTAGAGATCTTTGGAAATAGAATATGGAAAAAGTTGTATGCTCAGCCCCATTGTGGTATAATGAATACAAGATTATCATGAAATTTTTAAGTTTTGAGGGCTTTGAGAAATAGGAAGTTAAATTCTGCGCT # Right flank : TTGTTTGTCATCCTGGGCGAAGCGAAGGATCTCTGTCTGGAAGGTGAACCCTGAAGGATTAGATTCTTCGGCTGCTCTGCAGCCTCAGAATGACGATGGAAGAATGATGCCCTAAATTGATGGCTTCTTACTGTTCTCTTTTTTGATTGAAAGATTAAAAATCATCTTCAAAATTGTTAAAAGTGTTATCAAAAGAATGACTGCTGAAACAATTGTAATCGAATAGGAGAAAGTAGTAATAATTGAGAATTCCCATTAAAGCATCAATAAAGTCGTCATCTTCTGTTAGAAAAATATCGGTGCTGCTATCGCCGAAATTCCATTCAAAGGAGTTAAAATTTATTCTGATTGGCGTTTCTCCGTTGTTTATTCCGTATGGGAATCCACACTTGTAAGAAATTGTAGTTTTGTTTTTTCTATTATTAACTTTCTTTTTTGAAGAGTTATCTTCATTTTGCTGTAATTTTCTTTTGATAAATGCTTCTTCTTCTCTTTCTATT # Questionable array : NO Score: 2.61 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.24, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAAATGCCCTGATAAATGAGAGGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.26%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [50.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.77 Confidence: HIGH] # Array family : NA //