Array 1 47593-44147 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIUJK010000007.1 Chromobacterium violaceum strain OUAT_2017 7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 47592 29 100.0 32 ............................. CGCAACGCTTGCCAACCCTGCAGCAACACCAA 47531 29 100.0 32 ............................. GTGGACCGACAACCCCCTTTGATAGCCGAATT 47470 29 100.0 32 ............................. AGCTATCAAACTGTTTAACCTGCGTTCCGCCA 47409 29 100.0 32 ............................. TCAGCAGAGATATTTGCCAGTTTCAAACGATG 47348 29 100.0 32 ............................. CAGAATCAGGCGGTTGATGCCAGCGCGCCGGC 47287 29 100.0 32 ............................. GCGCACTGTCCTTTTGGACGGGGTCCAATTAC 47226 29 100.0 32 ............................. CCCATTCAGCCGAATCAGAATACTCACCATCA 47165 29 100.0 32 ............................. CCTGTCACCAAATTTCCTTGTCTTCCCGCAGG 47104 29 100.0 32 ............................. CTAAATGCAAACCAGCCCTCGCCGGGCAGGCG 47043 29 100.0 32 ............................. GCCGGGCTGCTGGGCGAAGCTGGCTTGATCGT 46982 29 100.0 32 ............................. CCACGTCCGGCAGCGGTGTGCGCATGTCTATC 46921 29 100.0 32 ............................. GAATCTATGGTCTATATTATGTCAAATCCGAT 46860 29 100.0 32 ............................. GCCCGCAAGCAATGCCTCGAGCGGATCGCGCA 46799 29 100.0 32 ............................. CGCAGGACTCCAAATCGAATACTGGCGGGTCT 46738 29 100.0 32 ............................. GGCTCTCATGACCGCACTCAACCCGAACGCTC 46677 29 100.0 32 ............................. GCTCCGTGGCGTTGATCAGCCCGACTACGGGC 46616 29 100.0 32 ............................. ACGCACAACGTCTGCGTGGTTCACCCGAATGC 46555 29 100.0 32 ............................. TCTGGATGCCCAGAGACCGAATCGTCAGTCGC 46494 29 100.0 32 ............................. CGCCCCGCCCGTCGGGGCGCAATAATTTGCGG 46433 29 100.0 32 ............................. CAGAACACCACCTAGGAGAAATAATTTCTTGG 46372 29 100.0 32 ............................. CGGTAGCGTCACAGCCTGTCGCGCAAACAGCT 46311 29 100.0 32 ............................. CAGCCCAGCTGGCGAGATCTCAGGCCGATCTA 46250 29 100.0 32 ............................. CCGGGCCAGTTGGCATCGAGCATCCGGATGGC 46189 29 100.0 32 ............................. CCTCCTATGTGTGGGGTCCAATGTGTTCGGCT 46128 29 100.0 32 ............................. GCCCTACCGGGGATGCTGCCTGGTGGGTTATT 46067 29 100.0 32 ............................. ATAATTGCAAAATTTAGATCCGTTTTTGAAAC 46006 29 100.0 32 ............................. TTACGTACCAGACTCTGCGCTGACGGACCTGC 45945 29 100.0 32 ............................. TTGTGATAAAGATACCAGATGCAAAACGTAAC 45884 29 100.0 32 ............................. CCATCTCGATGCTTCCAACATCGAGCAGGCTT 45823 29 100.0 32 ............................. CGCAACTTTCACGCGCTGAATAATATTGCCAA 45762 29 100.0 32 ............................. CCGATGACTGCCTATGACGCCAACGGTCAGCC 45701 29 100.0 32 ............................. CGCGGGGGCGAGGCGGGGCTTCGATGGCGCGC 45640 29 100.0 32 ............................. TGCCCTATCTGCATTTCTCTGATTGACCCAAC 45579 29 100.0 32 ............................. AACGGGCGCAGCTCCGGAAAGAAGTTGATGCC 45518 29 100.0 32 ............................. GCAAAGGAAATTTATTTGGATTGAAGAGTGAC 45457 29 100.0 32 ............................. TGATGGTGAGCCCCGAAATCAAGGCCTGGCTG 45396 29 96.6 32 ............................A GCAGCGTTAGCACTCCCGAATACATCGGATGG 45335 29 100.0 32 ............................. TCCAAACGTCATGTCGCCATTGCTATCCAGTT 45274 29 100.0 32 ............................. CCCGACCGCGCCAGAAACGAGGCGTTGGACTG 45213 29 96.6 32 ............................A CGCTATGAAGGGCGCGGACCTGAAGTCAGTTC 45152 29 100.0 32 ............................. CCGAGCCGGACGCCGACGACGCGCCGCAGGAC 45091 29 96.6 33 ............................A GGCGGGCACGACGCTGGGCGCGATTGTGAAGAA 45029 29 100.0 32 ............................. GCCAGGACCAACACGCAGGAGGCTGGCTAAAA 44968 29 100.0 32 ............................. TCGGCCATCAGCTTTTTGTTGCAGTACGGGCA 44907 29 100.0 32 ............................. CACGATAGTCGCGCCTGGCTGCATACGCCGTT 44846 29 100.0 32 ............................. GCAGATGGCCCGGACCGGCGTCGGCCAGTGCG 44785 29 100.0 32 ............................. CCAGCGTAATCGTGTCCGGAACGGCTGGCCCC 44724 29 100.0 32 ............................. AGTTCCTCGCCTTTGGCGCTCTTCGACATGCG 44663 29 100.0 32 ............................. GCCCTGCGGCTGATTGAGGCATGGGGCGGCAC 44602 29 100.0 32 ............................. GGGTTAAAACGTGAGCTTCCTCGACAACGTGC 44541 29 100.0 32 ............................. CCCACCCCACATTCCGATGCTCACCAAATGAA 44480 29 100.0 32 ............................. CTGCAGGGATACCTGGCGCGCCTGGCGCATGA 44419 29 100.0 32 ............................. CCAGTCCGCTCGCGCACCTCTTTGATTCTCAT 44358 29 96.6 32 .......T..................... CACGATTTCGCTGCCATCGGTTCCGGGGTACA 44297 29 100.0 32 ............................. GCGAGATTAAACTTGGGGAAAACAGAGATCAG 44236 29 96.6 32 .........G................... TTTCAGGTCGAGGGCGTGGATGGTTGGCGCGT 44175 29 82.8 0 ....................A...TG.TT | ========== ====== ====== ====== ============================= ================================= ================== 57 29 99.4 32 GTGTTCCCCACGCCCGTGGGGATGAACCG # Left flank : CGGACATCGAAACCATGCTGGACGCCGGCGGCCTGGACAAGCCGGAGGCGCAGGGCGTGGTGGACGCGGCGTTTCCGGAAGACGAGGGGCTGGGCGATGCTGGTCATCGTACTTGAGAACGCGCCACCCCGGCTGCGCGGCCGGATGGCGATCTGGCTGCTGGAAATCCGCGCCGGCGTTTACGTGGGCAACTACAACCGCAAGATCCGCGATTACCTGTGGCAGCAGGTGGAAGAGGGGCTGGAAGACGGCAACGCGGTGATGGCTTGGCAGGCCGCCACCGAGGCCGGCTTCGACTTCGTCACGCTGGGCGCCAACCGCCGCATCCCGGCCGAGTTCGACGGCGCGAAATTGGTGTCTTTTTTGCCGCCGCCGGTGTCGGAAGCGGGGGGCGAATAGAGGGCGGGTGGAGTGTGGAGAAAGGTAGGTTTGGCTCTTTAAAAATCGGTAGATTTTTGAGTGGCAATTTTGTTTTGAAAAATCAGTTGCTTGCAATTGGT # Right flank : CTGCCCGTCTATCGCTTGCTTAATCCACGGCCGTCGCGTTGCCCGATGCGCTTGCGATCGACGCGCCGCGGCTTGCCGTCCGAGGAGGGCGCTTCCTATGCTGCAAGAATCGATGTCAGAGGAATCGCCATGCAGCAGTTAAGAGTGAGTGTTCTGGTTGCCGCGCTGTTTCTCGTCGTCGCCGTGGTGTCCAAGACGCTGGCCAGCTCCGTCACGGAGACCGTGCCGGTGTGGCTGGGCAGCGGGGTGACTTTTTCCGCGTTGCTGATTTCTCCGCGCTGGCGCTGGCCGGCCATTCTCGCCGGCGTGTGGCTGGCGTCGGCGATATGGGGGATGTCCGCGCATGGCCTGGGGCTGGCCGGCGCGGCAGCGTTCGCGGGGATAGAGGTGGTCAGCGGAGCCGTCGGCTGCTGGGTGGCCGGACTGGGGCGCAACGATCCGGATTCCCCGATCGGCATGGCCTTGCTTCTTTGCGGCGCGGCGCTGGCGTCCTGCCTGGG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGCCCGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCACGCCCGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 59895-56960 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIUJK010000007.1 Chromobacterium violaceum strain OUAT_2017 7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 59894 29 100.0 32 ............................. CAGATGATTATTGGTCTGTTTCTGGTGGTTTT 59833 29 100.0 32 ............................. CAGTTGAGAGAATCGCAGACTTGACCTTAGAC 59772 29 100.0 32 ............................. ATTGTCATAAAATTGGGTTATCCGAAACTGAG 59711 29 100.0 33 ............................. TAGATCATTTCCCGCCCCCAAATCCACTAAATT 59649 29 100.0 32 ............................. TTTTTATGTGACGGCCCGCCTCCCAGCCCTGA 59588 29 100.0 32 ............................. GTTTCCATAACAGACATCATCCTGACCCAACA 59527 29 100.0 32 ............................. ACGGAAAGCGCCGACATCCGGTTTTTCAAGGG 59466 29 100.0 32 ............................. CCCCCGTGTCCTCGCCCAAAGGGCTGCGGGCC 59405 29 100.0 32 ............................. TGCCGGCCGGCGCTGGTGGTGACCGCAAATGG 59344 29 100.0 32 ............................. TTGCTTGCTGATGCTGGGGCCGCGGTTATCGC 59283 29 100.0 32 ............................. CATCGCCAGCAGGCGTAGGCCAGAACGCGAGC 59222 29 100.0 32 ............................. AGGGTTTTCCCACTGCCAGGCGTAGCGGTAAG 59161 29 100.0 32 ............................. ACGCTCTTCATCAGTTAGAGACTCATTCCTAG 59100 29 100.0 32 ............................. GGCGTTGACCATTCTAAAATAGCTGAGATATT 59039 29 100.0 32 ............................. CCGCCCCCCCATCAGATGGATTTACTTCATCA 58978 29 100.0 32 ............................. CCGAAGAGCTCATGCTGAAGGGAAACACGCTG 58917 29 100.0 32 ............................. GCTGGCGTCGCTGAGCTGATCCGAGGCGGCAG 58856 29 100.0 32 ............................. CCGACGGAGACCGCATCGTGTCCCCATTGGGT 58795 29 100.0 32 ............................. TTTCAAATGCCTCTGCGGCTCAAACAAATGAT 58734 29 100.0 32 ............................. GAAACGCTGCAATGGATCGAAATTCCCGATCC 58673 29 100.0 32 ............................. GCGTGATATGCGTTGAAATTAAAATCCAACAT 58612 29 100.0 32 ............................. TGCTGACGCAGATCTTCGCCGCGCAAGTAGCA 58551 29 100.0 32 ............................. TGACCTATGGCCTGACTCAGTGTAATGGACGG 58490 29 100.0 32 ............................. TCGTCCATGATCCGCTCGCCGGTCATGTACTG 58429 29 96.6 33 ............................A GACACGGCCCGGCCAGGTGCGCGGCGTACCGGA 58367 29 100.0 32 ............................. CGATATACAACTACCGCAGAGGCGTCAGCAAA 58306 29 100.0 32 ............................. CCCATCTGATGGGGGCGGCTCCGGCCGCCTTT 58245 29 100.0 32 ............................. GCAAAAACTGTCCGTTAGTACAGGTATGCGCA 58184 29 96.6 32 ............................T CTCTCGCCCGTCCGGGTGTGGGATTCCCTCAG 58123 29 100.0 32 ............................. GATTACTGTCCTTTCGGACAGGCACCAATTTT 58062 29 100.0 32 ............................. GTCCGATGACCATCACCTATAATTTTCAATAC 58001 29 100.0 32 ............................. GAAATGGGCGAGTTGCTGGAGTTGATCCATGC 57940 29 100.0 32 ............................. ATCGACACCGCAATCCGTGATATTCGCGGCCG 57879 29 100.0 32 ............................. TGGGCGACGTGTGGGGAATCGGGCGCCGGCTA 57818 29 100.0 32 ............................. GGCTGGCCGACGCGCCCGGCCCGGCCGCTGAG 57757 29 100.0 32 ............................. TTCCAGTTGGCGTCGGCCAGCGGAATGTTGTT 57696 29 100.0 32 ............................. TGACCGGCGCATTCGACCACAGCAACATGACC 57635 29 100.0 32 ............................. CGCAGGCGGCGCCTGGCTGTTCCAGCAACTCC 57574 29 96.6 32 ........T.................... CGCAGGCGGCGCCTGGCTGTTCCAGCAACTCC 57513 29 96.6 32 ........T.................... CGCAGGCGGCGCCTGGCTGTTCCAGCAACTCC 57452 29 100.0 32 ............................. GTCGCTCAGGTACTAGGGATTGACCCGATGGA 57391 29 100.0 32 ............................. CCAACACGACAAAATAGCCCGCCACATTTCGA 57330 29 100.0 32 ............................. CAGCGAGTAGTTGGGAGACATCCTGGATTTGC 57269 29 100.0 32 ............................. ACCTGCATTCCGTTTGCCGCAAATCCGGACGA 57208 29 100.0 32 ............................. TGATCCAGACGATCACCGTTGGCAACCGCGCG 57147 29 93.1 7 ........T................G... CCGCGCG Deletion [57112] 57111 29 96.6 33 .........................G... CCCCGCGAATGCTGGGTTTTGTTAGGAGAGTAA 57049 29 96.6 32 .......................T..... TAGCACTTGGATAAATAATCGCCATGCGAATC 56988 29 89.7 0 ...........G.CT.............. | ========== ====== ====== ====== ============================= ================================= ================== 49 29 99.2 32 GTGTTCCCCACATGCGTGGGGATGAACCG # Left flank : CCTGCTGGCGCAATGGCTGTACAACGTGCCGCCGCTGTTCCACCTGTCCGCCGCCAGCCTCAAGGCCCGCCTGCCGCAGCTGCAATGCGCCGACCGCGCCTTCCGCCCCTTGCACGAGCAACTGGCCACCCAGGCGCTCACCGGTTTCGCCTGGCTCAATTCCGAGCATACGCTGCAGCAAACCCGTTTCGCCGACGGCAGCCGACTCACCGCCAACTTCGGCTCCGCGCCGGTCCGCTACGATAAGCAAACCCTGCCGCCGCAAAGCCTGCTGGCCGAGCTGGCCGGCCAGCCGCCCAAGCTGCTGCCAGTGGCGGATTGCGCCGGCAAGTAAGCGGCGGCGATAATGCCGATGTCGTTTTGCCGGTCATGGCGCGGCGGTTTGCCTTGGCCGGCGAGCGGCATTGCCGAGCGATCGAGATGGTGATTTTTTGAGCGGAAAAATCGGTAGATTTTTGGGGTGGGTTTTTGTCTTTAAAAATCAGCATCTTGAAATTGGT # Right flank : TCATCCAGAGACGGCAGGCCGATGTATTTACCATGTCGGTGGAGCTTGAAACACGAGTGATGGCTGTGAAGAAGATACATTTCTCGGCCCTGTAAGTCACTGATGCGTTTAGTCCTGACGGCATGATTTATATCAATGTTCTTATTGGCATAAATGACAATGTGCTTTTGGGCTGATAACCTGCCCGCTTGAGTTAGTTGCAGCTATCTGACCGGCTGTCACCGGAGGGGCGATGCAGGGGTACTGGCGGTACAGGGGGAAATCCTCGCCTCGTGACGAGGCGGGAGCGTGCTGGCATCTACTGCCATTCCACATGCTGGATGTGGCCGCGGTGATGGAAACACTGCTGTTTCAGCGACCGGCTTGGGTGGCGTCGTGTGCCGCCAGCCAGGGGTGGAGTGCGGAGCAGTTCCGCTTCGTGGCGGTTTACTTCGCTATTTTGCATGATCTGGGCAAGTTCGCCCGCAGTTTCCAGGCGATTCTGCCGCCCGGTTCCGACG # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:-0.03, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACATGCGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCACATGCGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 69397-67171 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIUJK010000007.1 Chromobacterium violaceum strain OUAT_2017 7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 69396 29 100.0 32 ............................. CGACGAGGCCGGCCAGGGCGGCCGGTATGACG 69335 29 100.0 32 ............................. CAACGGGCCGCCGCGCTGGCCGAAGGGCTGAC 69274 29 100.0 32 ............................. CGAATAGTACGCGCGTTATGCGCGGGTGTCAA 69213 29 100.0 32 ............................. GCCATAGGAACAGCAATAAGCGACACGACCAG 69152 29 100.0 32 ............................. GCAAAATTCCTGAAGGTGGACCGAGACGCCTC 69091 29 100.0 32 ............................. TGGCCTGAGGGAATCTACAGTCTATATTATGT 69030 29 100.0 32 ............................. AGGATTTCATCGCCCTGTGGGCGGAGTTGCGC 68969 29 100.0 32 ............................. CTGGCTGCTGGCAAGTACCGCGACACGGCCTC 68908 29 100.0 32 ............................. GTGAATGGCGGCACGTTCTGCATGGGCAATTC 68847 29 100.0 32 ............................. ATTTTTATAGTGAAAACGTCAATGGAGTACCT 68786 29 100.0 32 ............................. CCGAGGGAAAGCTAGGAACAAGCAACAACGCA 68725 29 100.0 32 ............................. TTCGTTTTGAACGGCGATATCAAGCCGGAGTA 68664 29 100.0 32 ............................. CGCCGCACGAAGGCCGAAATCGAAGCTGATAA 68603 29 100.0 32 ............................. CCCTTTAACTTTGCACGATGACGGAAATGTCA 68542 29 100.0 32 ............................. TAATCGTTCGGTTGGCTGGCGGCTTCGGCCGC 68481 29 100.0 32 ............................. CCATAATCATCAAAACACGCAGAACCAGATGG 68420 29 100.0 32 ............................. GCCAGGCTGGATGTCGGCGTAGCCCTGATGGA 68359 29 100.0 32 ............................. TTGATTTACGTATGTGTTAGCAAATTCCTTAG 68298 29 100.0 32 ............................. CGATCGCCGCCGGCGACCGGGCCAGCGCGCGC 68237 29 100.0 32 ............................. ACTGGCGGCGAGCGCCTTGGCAATGGCCCGGA 68176 29 100.0 32 ............................. CATCATCTTTTGCCGGCCAGCTCGCCGGCGTA 68115 29 100.0 32 ............................. AAAGCGCCCAAGACGTACGGCGACAGAATCGA 68054 29 100.0 32 ............................. ACATAGCCGTCTACATGAATTTGTACAAATTC 67993 29 100.0 32 ............................. GCCGCAGAACGGCTGAAGATTCACAGAAACAC 67932 29 100.0 32 ............................. ACCGAGGACCTCGCTGGCGGCGGTTTCATCGT 67871 29 100.0 32 ............................. ATTTTTCCCTGGGCGATCTGGTCCGGCGTGTT 67810 29 100.0 32 ............................. GCCAGCACCGAGGCTGCCCGCCTGCTGACCGA 67749 29 100.0 32 ............................. GAGCCGCAGGGCTCTGTCTTGAAAATGGATGC 67688 29 100.0 32 ............................. GATAATCGCCGTCTTGCCCTCGCGCGGGCGCA 67627 29 100.0 33 ............................. TCCGTCGAGATACCAGATCAATTTCGATGTGCT 67565 29 100.0 32 ............................. GGGTTTGTGCGCATCCCGGCCGATGATGTGAT 67504 29 100.0 32 ............................. TCTGAAGTAGAGGCTCTTCAAAAGGCACACCG 67443 29 100.0 32 ............................. TTGAAGTAATACGGCGCACCGCTGGCGGTCTT 67382 29 100.0 32 ............................. GCCTGATTGGGTGTGGGACATTATTCAGATAG 67321 29 100.0 32 ............................. GCAGTGAAGGGGATCGCGACCTTGCGCTCGTG 67260 29 89.7 32 .........................G.TA AAGCCAGTGCCTCAAGGCTTGAGGGTTCGAGA 67199 29 69.0 0 A.A.........GTT..........TTGA | ========== ====== ====== ====== ============================= ================================= ================== 37 29 98.9 32 GTGTTCCCCACGCACGTGGGGATGAACCG # Left flank : TGCCCACGCCGGGCGGGCCCCACAATATCATCGAATGCGGCTTGCCGGACGCCACCGCCAAGCTCAGCGGCTTGCCTTGGCCGATCAGGTGCTGCTGGCCGATCACCTGATCGAGCGCCTGAGGACGCAAGGCCTCGGCCAGCGGTTTTTGCGGTTCGACGGAAAAAAGATCGGACATGGCGCGATTTCGGCGGGATGGGGCGGAGAAACAGTATACCAGTTGGGGACAGGCATGAAAAAAGCGCCGGCCAGGCGCTTTTTGCTTGCATGTCGATGGAATGAAGGTACGCTATGGCTGCTGACCTAGCCTAAGCCTTGCTGTTGCGGAAGCTTGGCGTTCAGCATCAGGGGCGAGCGGTGTCGGACCCTTGTGCAAGGGACGATTTGCCAAGGCCTGGCGGGGTTTGCCGTGCTGATTTGAACGCCGCTTCATGACTGGGAAAATCGGTAGAATTTTAGATCGGATTTTTGTCTTTAAAAATCAGCAGCTTGAAAATGGT # Right flank : CGGGGGACGGCTGGAGTGGTGTCGCGGCGCTGCCAGTCCGGCCGCGTCCGGCAACAAAAAAGCGCCCCGTGGGGCGCTTTTTTTCTGCACAACGAGTAAGAAGGCTTAGGCGCGCTTCTTGAATTCGTTGGTGCGGGTGTCGATTTCGATCTTTTCGCCGGTGTTGACGAAGGCCGGAACCTGAACTTCGAAGGTGGTGCCTACCAAGCGGGCCGGCTTCAGCACTTTGCCCGAGGTGTCGCCGCGCACGGCCGGTTCGGTGTATTCCACTTCGCGGATCACGGTGGTCGGCAGTTCCACGGAGATGGCCTTGCCGTCGTAGAAGGTTACCTGGCACACGTCTTCCATGCCGTCGACGATGTAGTTGATGGTGTCGCCCAGGTTGTCGGCTTCCACTTCGTACTGGTTGAATTCGGTGTCCATGAACACGTACATCGGGTCGGCGAAGTAGGAGTAGGTGCAGTCCTTGCGATCCAGCACCACTACGTCGAACTTGTCGT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGCACGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCACGCCCGTGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //