Array 1 506634-505762 **** Predicted by CRISPRDetect 2.4 *** >NZ_FWCM01000003.1 Mycobacteroides abscessus subsp. abscessus strain 1116, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ==================================================================================== ================== 506633 28 100.0 33 ............................ GAAGAAGATCTTTTGCAGGCTGACGTCGCCCGA 506572 28 100.0 33 ............................ GCTCGCCTGACCAACCCCATCAACGACGAACGG 506511 28 100.0 33 ............................ GGAGCCGACGGCGCTGGCGGCCGGCAGCGAAGA 506450 28 100.0 34 ............................ CACCACCGCCCCGCTGTCGCCGATCTCGGTGCGT 506388 28 96.4 33 .............G.............. GAAGGCGCAAGAGAAGTTGGGCACCCTCGGTAC 506327 28 96.4 33 ........A................... GAAGGCGCAAGAGAAGTTGGGCACCCTCGGTAC 506266 28 96.4 33 ........A................... GGTGAGGGCTGTCGAGGTCGCCGGCGGCACCGT 506205 28 92.9 33 ..C..........G.............. GTTGGAACAACTTTCTGGATTCTGTCCCACCCT 506144 28 92.9 32 .............G..T........... GACCGTCGCCACCAGGTGCGAGACGCTCACCC 506084 28 96.4 34 .............G.............. GCTGCCCGCGCGCCGACTTCCCGGCGGCCGTCAG 506022 28 96.4 32 .........................C.. CCGAATCGGCGGCCGCGTGTCTGTCAGCGCCG 505962 27 82.1 33 ...T..........-......G..TT.. CCGGGTTCGCCCGGCCACCCGCACCGGTTCGCC C [505960] 505901 27 82.1 84 G...........T.-.........TT.. CGTCAGCTTGCCGTTCGCGTAGGCGAGCCACTCGCGTGCGCGGGGTGTTCCCTTGCCCGCGATCCGTGTCGGCCGCACTTACCG 505790 27 82.1 0 G..T........T.-......G...... | T,T [505765,505768] ========== ====== ====== ====== ============================ ==================================================================================== ================== 14 28 93.9 37 CTGCTCCCCGCGCAAGCGGGGATGAACC # Left flank : GAGAGCCACCGCGGCAATGATGCCCGCGGCGGCGATCTTGAGCGCGTTTCTGCTGGTCACGGTTTCGATTGTTCCAGACGATGTCGAACGAACCGCCGAATGCGATGTCACGTCCCCCGTCCGGATGTCTTGAGCGGGAGCCGGATTCATGGACGTACCGCCTCGGCGAGGCGCCGCTCCACGGCGCGGAGGTCATCGATCGCAGCGGTGAAGTTGGCCCCGTCGGTGCCGGTGCCGTGCGCGTGTTCCAGGAGCTCCACCACGCCGCGCAGACGCGTCTGTGCGCTGCGCACATTGTCGTGGATCGACGTCGCCGGGCTGGTGATCAGGTCGCGGTAGTCGGTACTCATGCCCGACACGGTGCACGCCCCAGCAGCGAGGTGACGCCCGCGGCGCGGGTTCGGCAGGTGCGCTCGCCATGCTCGCAGGAGGTGGCGATTGTTAGCTTGTCACAGGTGTCAAACTGGGCACTCGTGCTGTATCGTCCCAGGTCAGGAAGT # Right flank : GTTTCCATTCTCTGTTTTGGAGAATGTTTCCGCTGGTAGAGGCGCTGCGGTGAATGCGCGTCCTCCTTGACGGCGTTCGCACAGATGTGCACAATCGGTTCAAGTCGCGATCCGAGCGCGACGGCGGCCTCCGGGTCGTTCAGGGCACGTGCCGCATCCGCCGGACACGCCGCTCAGCTCCCGCCCTCGGACCAGGGACTGCTGAGGGTGCACCCGGCATCACCTTCTTGTGATGCCCAGGAGTGCGCCCATGAGTGCCAACATCACCCTTCTCACCATCGACGCTGCTGCTGCGCGCCGCGGCGTTCATCACTCGACTATCCGCCGCTGGATCCGCGAGAGCCTCCTCCCGGCTACCCGTCTGAGCGACGGCACCCTCCGCGTGACCGCGGCCGACCTCGACGCGGTTCGTCCGCCGGAACGGGTGAAGCCCCGCTCCGGTGACACCGTGTCGACCCTGCGCGCGATCGTGAACATGACCGGCGGCGCGATCGAGGACC # Questionable array : NO Score: 5.49 # Score Detail : 1:0, 2:3, 3:0, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.49, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCAAGCGGGGATGAACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCAAGCGGGGATGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [16-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //