Array 1 2044-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_FQWD01000015.1 Marisediminitalea aggregata strain CGMCC 1.8995, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 2043 29 100.0 32 ............................. TAGCCATGGTATTGCCCTCGTTGTGATGTACA 1982 29 100.0 32 ............................. GTTTGACTGGCCCACCTGTAGTGTTTACGTTT 1921 29 100.0 32 ............................. GCTTTTAATTACCGCGCCGATCAGCGGTGTAA 1860 29 100.0 32 ............................. CGGCTGCAATTCTTTTGGCTGCAAGGTGGGGC 1799 29 100.0 32 ............................. GATATATATGTTACGCCTGGCGATTACAATGT 1738 29 100.0 32 ............................. CAATTGAGTCAAGGAGAAAAGCCGAGCGCGAA 1677 29 100.0 32 ............................. CGCATTATTAAAATCGCCGCCACCAGAGAACG 1616 29 100.0 32 ............................. TTGGCTGACGGTAGTCGTTACATTCTTGACAG 1555 29 100.0 33 ............................. CAGCATGAACACAGTAACAGAAACCCGCGCAAC 1493 29 100.0 32 ............................. CGGCAACGTTTTGATAGTGTCGGCACTCCCTT 1432 29 100.0 32 ............................. TTAAATCTATTGCCCGATCCGTTCTTCAGGCA 1371 29 100.0 32 ............................. GACATTGCCCGGGAAGCAGAGAAGGTAAAAGC 1310 29 100.0 32 ............................. GGCATCACTTACCCAAGAGCAATGGTCCAGGG 1249 29 100.0 32 ............................. CTTTATCAGTCATTGATTGAATGTCTTGTTCT 1188 29 100.0 32 ............................. CCTATCTGGCGGAGATTTTGATAACCGGGATA 1127 29 100.0 32 ............................. GAGGGTGACACTTATTCTGTAGCTGTAGCTGT 1066 29 100.0 32 ............................. CAACGAACTGCGTGGCATGTTCAATGTAATTT 1005 29 100.0 32 ............................. TCGTAATCAACCAGGCCCTTTTTACCGCCGTG 944 29 100.0 32 ............................. CATGGCGTTCTGGTCGGTGGCGTTTATATCAG 883 29 100.0 32 ............................. AAACAAAATGATTTACTCACTCACACCATAGC 822 29 100.0 32 ............................. TGGCAAATCCATCGCGGTTGGCGACTTTCTCA 761 29 100.0 32 ............................. CTTGCAACAAGGCAAGGATTTGCGTGAATATT 700 29 100.0 32 ............................. TTGCGAGGCGCAGAGCAGGTAATTAACCAGCA 639 29 100.0 32 ............................. TTGCAGACACGGCAAAAGATAGCATGCAGTAC 578 29 100.0 32 ............................. GACCGGAAGCCAATAAAAAAGCCCCGAGGCGT 517 29 100.0 32 ............................. TAAATACAGCACAATTTACAGGATACACGTAT 456 29 100.0 32 ............................. CTGGCTTTTTCACCGGCCAGATACGAGTTGTC 395 29 100.0 32 ............................. CATGGCGTTCTGGTCGGTGGCGTTTATATCAG 334 29 100.0 32 ............................. AAACAAAATGATTTACTCACTCACACCATAGC 273 29 100.0 32 ............................. CAAAGACGGCACAGCCGCGAAGCTTTACGACA 212 29 100.0 32 ............................. ATAGCATGCAGTACATGCTATCCCTAGTTGCT 151 29 100.0 32 ............................. CACCGCAATACGAAACATTGGAGTTACCATGA 90 29 100.0 32 ............................. CGGTCACGGGCTACCCAACGCGCATCAGCCAG 29 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 34 29 100.0 32 GTGTTCCCCGTGCCCACGGGGATGAACCG # Left flank : | # Right flank : G # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGTGCCCACGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGTGCCCACGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.70,-10.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 471814-469100 **** Predicted by CRISPRDetect 2.4 *** >NZ_FQWD01000003.1 Marisediminitalea aggregata strain CGMCC 1.8995, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 471813 29 100.0 32 ............................. GTAGTAATCCGACCATACAGCATTGCGCCCAT 471752 29 100.0 32 ............................. CCAATCAGGTGAGTATTTCGCGCACTCTTGAG 471691 29 100.0 32 ............................. CAAGCGCAAACCCAGTTAAGTGAGTTTGAAGC 471630 29 100.0 32 ............................. GTAATACTTGCATCTTATATTTTGGTTTATGC 471569 29 100.0 32 ............................. CTAGATGTGCATAGTGAAACTATCGCAGCAAT 471508 29 100.0 32 ............................. CCATCGCTTATTTCTCCATCTTATATCAAAAA 471447 29 100.0 32 ............................. CGTCAATGCGGCCGAACTATCCACGACACGTT 471386 29 100.0 32 ............................. GCCAGAGATCGCGATGATAACCATATCGCCAA 471325 29 100.0 32 ............................. TCAACACTTCGACCTGATGATAGCTCACCCGC 471264 29 100.0 32 ............................. AAACCAATTGGGTTGGAGACATTGCCACATAG 471203 29 100.0 32 ............................. TAGGGGTAAGACACGTTAATTTGGGTATTTGG 471142 29 100.0 33 ............................. GTGCTTTCACTGGTTGAGGGTGCAGCAGTAGTT 471081 29 100.0 32 ............................. AGAATAGTTGGTAATTATGGCAGCCGACCCAA 471020 29 100.0 33 ............................. ATGGTGGCAAACCATCCCAATGGCAGCGAGTAC 470958 29 100.0 32 ............................. TAGAAGCGTAAGTATCTCGTGATTTTGTACAA 470897 29 100.0 32 ............................. GGATTCATCGAGTACTTAAAGTCATTACCAAA 470836 29 100.0 31 ............................. CTTCACCATCAATATTGTGAACAAAATGCTC 470775 29 100.0 32 ............................. CAATTTCGCTTTAAGAGGACTATATGAAAATC 470714 29 100.0 32 ............................. GCCACAATGTTGGCGGCACTAACTGGGATCAC 470653 29 100.0 32 ............................. CAATGTAAGCCAGACATGGTTTTACTCGATCT 470592 29 100.0 32 ............................. GACCGGAAGCCAATAAAAAAGCCCCGAGGCGT 470531 29 100.0 32 ............................. TAAATACAGCACAATTTACAGGATACACGTAT 470470 29 100.0 32 ............................. CTGGCTTTTTCACCGGCCAGATACGAGTTGTC 470409 29 100.0 31 ............................. ATGGCGTTCTGGTCGGTGGCGTTTATATCAG 470348 29 100.0 32 ............................. AAACAAAATGATTTACTCACTCACACCATAGC 470287 29 100.0 32 ............................. TGGCAAATCCATCGCGGTTGGCGACTTTCTCA 470226 29 100.0 32 ............................. CTTGCAACAAGGCAAGGATTTGCGTGAATATT 470165 29 100.0 32 ............................. TTGCGAGGCGCAGAGCAGGTAATTAACCAGCA 470104 29 100.0 32 ............................. TTGCAGACACGGCAAAAGATAGCATGCAGTAC 470043 29 100.0 32 ............................. GACCGGAAGCCAATAAAAAAGCCCCGAGGCGT 469982 29 100.0 32 ............................. TAAATACAGCACAATTTACAGGATACACGTAT 469921 29 100.0 32 ............................. CTGGCTTTTTCACCGGCCAGATACGAGTTGTC 469860 29 100.0 31 ............................. ATGGCGTTCTGGTCGGTGGCGTTTATATCAG 469799 29 100.0 32 ............................. AAACAAAATGATTTACTCACTCACACCATAGC 469738 29 100.0 32 ............................. CAAAGACGGCACAGCCGCGAAGCTTTACGACA 469677 29 100.0 31 ............................. TAGCATGCAGTACATGCTATCCCTAGTTGCT 469616 29 100.0 32 ............................. CACCGCAATACGAAACATTGGAGTTACCATGA 469555 29 100.0 32 ............................. CGGTCACGGGCTACCCAACGCGCATCAGCCAG 469494 29 100.0 32 ............................. GCCATTGTCAAAGAGGCAAAGAAAAATGTTTG 469433 29 100.0 32 ............................. CAAAAAGGCGGTAAGCAAGGCAATGCCAGAAA 469372 29 100.0 32 ............................. GCGGTTTTACCTTCCCCCACAAACGCCACTTT 469311 29 96.6 32 ........T.................... CCGCCCAGCGACCACATGCCAATGTATTCCAG 469250 29 96.6 32 ................T............ TCATTAGGAATAAACGCGGCAATAGAGTCGCA 469189 29 100.0 32 ............................. CACATTGACGATGTCACATGGAGAAAAATCGA 469128 29 86.2 0 ..............T..........G.TA | ========== ====== ====== ====== ============================= ================================= ================== 45 29 99.5 32 GTGTTCCCCGTGCCCACGGGGATGAACCG # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATTTGTGTTCCCCGTGCCCACGGGGATGAACCGTCGTAATCAACCAGGCCCTTTTTACCGCCGTG # Right flank : TCGCTACCCAATTCTTCATTGAAATTGCTTGTCAACAGAGGTTTGCTTTTTGAGGTTAGATCTCGTTGAGTAGAGGAAATCGGTGGCAAATACATATAGCCATCAGTGTCATTGGGGACTTTGTTGTTCGCTGCACTAGGTTAAAATGAAGAGAAGAAGAATGTTACTGTAAGAAAAATTGCGCCAATGATGCACAATTCGATGCCCTTTTTATCATCAGGGTCATTGGCCATCAGAAATACGTGAATACAGTAGGCAATAAAATAGGCGGTAGCAACGTAGCGAATAAGATGCGGTATTTGGATAAAAAAATACCCGGCTGGCAGCAGGTAAAATACGTAGGACACGAGTGGTGATACGAGCGCCTTTCTAAGCAGTTTGATTAGCCACCCGGAACGACTCTCCGGGCTGTGCTTGTTGTCCTGACCATCATCAGTGCTCGTAGCATTGGAGGGTGGTGACGGTTCAAGCGTTTTCGCTGGCGCTTGGATACTGTTTTC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGTGCCCACGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGTGCCCACGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.70,-10.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 473167-473016 **** Predicted by CRISPRDetect 2.4 *** >NZ_FQWD01000003.1 Marisediminitalea aggregata strain CGMCC 1.8995, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 473166 29 100.0 32 ............................. GTTTCGGCTGTAACCTTTGCGCACATCAACCC 473105 29 100.0 32 ............................. TAGCCATGGTATTGCCCTCGTTGTGATGTACA 473044 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 3 29 100.0 32 GTGTTCCCCGTGCCCACGGGGATGAACCG # Left flank : TAATAGAAGAAGTGTTGAGTGCTGGGGAAATTACGCCTCCAGAGGCGCCAGAGGATAGTCAGCCTCCAGCGATACCTGAACCACAAAGTATAGGTAACGAAGGTCACCGAACGGGGTAATTTATGGCTATGATCACTGTAGTTACTGAAGCGGTACCACCTAGATTAAGAGGGCGCTTAGCGGTATGGCTTTTAGAAGTGCGGGCGGGCGTATACGTAGGTAATGTTTCTCGACGTATTCGCGAGATGATTTGGTTCCAGGTTACTGAACTTGCCGATGATGGCAATGTCGTCATGGCGTGGTCAACTAACAATGAATCGGGTTTTGACTTTCAAACCTATGGTGAAAACAGGCGAGAACCGATTGACGTTGATGGGCTCAGACTTGTGCGTTTTTTACCTGCTGATTCTGACTGATTTTAGATTAATTTTGATCTTTAACATTCTGGTAGATTTTTCAATTGGGTTATTTCCTTTATAGATCAATTGTCTATAATTGGA # Right flank : GNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGTGCCCACGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGTGCCCACGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.70,-10.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [0.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //