Array 1 53799-51600 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHXRE010000002.1 Prevotella histicola strain SCHI0034.S.10 Contig_2_pilon, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== =============================== ================== 53798 47 93.6 30 A........C............A........................ AATGGAAGATTACGGAAAATCTTACCTTCT 53721 47 100.0 30 ............................................... ACCTTCTTATTTTTAATGTCTTCTGCGACC 53644 47 100.0 29 ............................................... ATTCGTTATCGCGAGAAAGGAGCGTATAA 53568 47 100.0 30 ............................................... CCTGACAGAAATAACTGTCTGGGTAAATAG 53491 47 100.0 30 ............................................... TAAATGACCTAGATCCTAATGATCGTTACA 53414 47 100.0 30 ............................................... AAAGCAAAGCGAGAAGTCATGTAAAGCGAG 53337 47 100.0 30 ............................................... ATAGTATCCTCTAAAACTATCAGCGGTACT 53260 47 100.0 30 ............................................... CGGGTGTGTATGAGAAAGAGATTGCGACAA 53183 47 100.0 30 ............................................... TATAACTTTCTCCGAGACTAACATTCTTTT 53106 47 100.0 30 ............................................... ACATTTCCTCACCTAACTTATTTCCGAAGT 53029 47 100.0 29 ............................................... GCCAAGCATCAGAAGCTTTAGGAATCTCT 52953 47 100.0 30 ............................................... CGTGGAAGAGCATCTTTAAGCTTTGAAATA 52876 47 100.0 29 ............................................... CACATACAAAATGAATATGAATACAGATA 52800 47 100.0 30 ............................................... AAACTACTTTTAAGACGACAAGTAGACTGA 52723 47 100.0 30 ............................................... TTAGTGGGCGTATAACCCATATTGAATTGA 52646 47 100.0 30 ............................................... GGGGAACAAATCTAGTAAACATAATTCAAA 52569 47 100.0 30 ............................................... AACGATGAGATTATCAATCGTTGAATTATA 52492 47 100.0 30 ............................................... CATTCGCAAGCCGAAAATCGCAACTATCAG 52415 47 100.0 30 ............................................... ATATATGGTTTTTTTGAATCAATAAATTCC 52338 47 100.0 29 ............................................... TAAAAGCAAGACTAAATCCGTACTAGAGA 52262 47 100.0 30 ............................................... TCCTGAACAAAACGATAACGCTGCCAAGTA 52185 47 100.0 29 ............................................... AAGCTAACTTATACTCAACTAACAACGAA 52109 47 100.0 30 ............................................... TAATCTGCGTGCCTTGTGTCAACGATGTCA 52032 47 100.0 30 ............................................... CAGGCTCAAAAGAGGGAGCGACAGGATCAA 51955 47 100.0 31 ............................................... CAGAGAAACCAATACCTTTCAAGACTTTATA 51877 47 100.0 30 ............................................... CAGGATCAAGAGACGGAGCAGAAGGATCAA 51800 47 100.0 30 ............................................... TAATATTAACTTCATAAACATAGAGATATG 51723 47 100.0 30 ............................................... CCACGATTATTAAGACGCACACAGAATAAA 51646 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== =============================== ================== 29 47 99.8 30 GTTGTGATTTGCTTTAAAATTAGTATCTTTGCATTATCAGACACAAC # Left flank : TAGCAATAACAATAATTATATATAGTAGAACAAATCTACCACTACGTAAAAGAAGAAAAGGGGGATAAGAAAAATATAAAAAAATAAGGCCGCTAAAGAACGACCTTGGGCGGTACACGATCTTTCGACCCTGTCCCTAAACCATATTACTATGATCTGATGCAAAGGTATATAATTAATATTAAACTCCAAAATCTAAATCTCTTTTTAAAGTTAATTAGCATTAAAAAGCCCGTTGTGATTCGCTTGAAAATACGTACCCTTGTGGTAGCAATAACAATAATTATATATAGTAGAACAAATCTACCACTACGTAAAAAAAAGAAAGGGGGATAAGAAAAACATAAAAAAGTGGGACGCTTAGAGCGCCCCTTGATGGTACACGATCTTTCGACCCTGTCCCTAAACCATATTCTTATGATCTAATGCAAAGGTATATAATTAATTTTATACTTCAAAATATAAATCTCTTTTTTAAATTAATTAGTATTAAAAAGCCC # Right flank : TCAAGTAGCGTAAGAAGGTGGTTATCAACACTGTAACACCTACTTTGAGAAAAGAAAAAATGCAAGTAAAAATAAAGTTCCACCATTAGAAGTGGAACTTTATTTATTTCTAAAACAGCTCTAATTGGACTCCAGGAGCATTTGGCTTATGCGGTTTCTTGCCATAAAAAAGTTTAATTTCTTCAAACTGTTTATCAGTTATACTCATTATTCCAACTTTCCCATACACAGGAATAATGGTTGACACCCTCTTAATATGCACTTCCATGTTTTCTTTACTACCACAATGGCGTATGTAAATAGAGAACTGGAACATTGTAAATCCGTCTTTTAGCAAGTTCTGACGAAAGAGTGCAGCAGCCTTTCTCTCCTTCTTTGTATCTGTGGGTAAGTCAAAAAACACCATTAACCACATACTCCTATATTGACTAAATCTATAAGTTTCCACTGAAGGGGATTATAAATCAGGATACAATATTCTTCTTTGCTCACCATTAAAG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTAAAATTAGTATCTTTGCATTATCAGACACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.21%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.90,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-85.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.64 Confidence: LOW] # Array family : NA //