Array 1 1020108-1019016 **** Predicted by CRISPRDetect 2.4 *** >NZ_VBXF01000002.1 Leuconostoc carnosum strain WC0319 NODE_1_length_1137580_cov_227.135155, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1020107 36 100.0 30 .................................... TATAGGCTCTGTAAATAATGGGCTAGAATA 1020041 36 100.0 30 .................................... CAATCTGAAAGCGGCGGTGCTAGTGAAGCA 1019975 36 100.0 30 .................................... ATTTTGTTGGCGGTTTGTTGACTTTTTGTT 1019909 36 100.0 30 .................................... CTTTTGCTTCGCAGAAAAACTAAGATCAAG 1019843 36 100.0 30 .................................... ATTTGTTGCACCTGTGTACACGGTGTTGTT 1019777 36 100.0 30 .................................... CTGTGACAATGTTTTCAGGCAGAGACGAAT 1019711 36 100.0 30 .................................... CAATCGCAAACAATCCAGCGTTCAAACCAA 1019645 36 100.0 30 .................................... TGATGTGGGTTATAATACACCAACAAAATA 1019579 36 100.0 30 .................................... CATTAACCGCGTTCCACTTACCATACCAAA 1019513 36 100.0 30 .................................... TAATATTGATTCAAATATTGCTATTCTAAT 1019447 36 100.0 30 .................................... TTGCTCCGCTACCGATAACTTTACCGATAC 1019381 36 100.0 30 .................................... GCTGACTACTGATAAATTGCGCACGCTCTG 1019315 36 100.0 30 .................................... CACCGTCCCAGATACTGCCTAAGAACCCAG 1019249 36 100.0 30 .................................... GAGCTGTGATATTTTCAAAGCCCTTAGCAC 1019183 36 100.0 30 .................................... TTCTATCACGTCCAATACCAACTGCATGCT 1019117 36 97.2 30 .........................G.......... CACTAATCTATTTAATGAGACAGAAAATAG 1019051 36 94.4 0 ........................A..........T | ========== ====== ====== ====== ==================================== ============================== ================== 17 36 99.5 30 GCTTCAGATGTGTGTCAGATCAATGAGGTTCAAACC # Left flank : GGCGCTCAACTAGATGTGAACAAGTTATATCAAAAAAATATTGTTAAGGCAATAAAAAATTATGCAGATAACAGAGCACTAGAACAATTTTATAAAATTAATTCTGAATTGAATCAGATACTAGAAAATATTATATTGGAAAATAATTTACCATTCTATTTTCAAACAGAATTTAATATTGTTGACTTAATTAATGAGAAAAAAATAAAGATTGAAACACTGACAAATAGCTCTGGATTTGGTAAAATAGAAGATGTAGTAAACGTTGCGGGGGAGTTTTCAGAACAACGTTTGATAGTTTTTACAAATATACATTTATTGCTATCCCTGGATCAGATTGACTATCTGCATAATTTAGCGAAAACAATGAATTTGTGTTTGATTTCTCTTAATTTGGCACAAAATCCTGTTCTGACTAATCAGGGTTCGTCTTATGAAATCTTCATTGATGGAGATTTCGTTCAATTTGGTATTGACTAGCCAATGCGAACAGGCGGTCT # Right flank : AAGTAAAATATTTAAAAGGTTAAAATTATGAAGTTGGTAGAAGCACATCCTATCAATAAAAAAGGCGGTTATACGCCTTTTTTTTATATGGCAGATATTTCTATAATAAAAGTTTAAACGAATGACAGTTATTGTAAAATATGCATGTTATATAAAATCACGTCAGACGTCAGACGTCAGACGTCTGACGTGAGATGGAGAAATGGAGATTTTCTTGTTTTGATAAATAAAAAATTACGAGTGAAAGAACTGCTCGTTTCAACAGTAATCATCGGTGGCGTTTTAGGTAGTCTGTCTACTGTTAACGCTGATGAAAATAAAGTAGGTTCATCAAAAACACAAACTTCGAGTGTGATGTCATCGTCAAGTTCGAGTCATACTTCACAGGTATCGCGCACAAAATCGTTAAGTTCAATTGTAGAACAGCAACATTCAGTTTCGAGAGATACTACGAAACAAAGCACACATTCTAGCGCAACAGTATCCACACGATCTGTTCA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAGATGTGTGTCAGATCAATGAGGTTCAAACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA //