Array 1 202-2091 **** Predicted by CRISPRDetect 2.4 *** >NZ_QPJT01000011.1 Anaerobacterium chartisolvens strain DSM 27016 Ga0244570_111, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 202 37 100.0 39 ..................................... TAAGCACCTGCCGGCTATAGATATTATTGATTGTCTTAT 278 37 100.0 39 ..................................... AGCTTGTGGTTTTTGACCCTCCGCACTTAACGTGGGCAG 354 37 100.0 37 ..................................... TTACAATTGCTGCGAAGCCGAGAAACACCCATGCTTT 428 37 100.0 37 ..................................... CCTGCACTCAATAGCTTTGTATTGTTAACTGCCCATC 502 37 100.0 37 ..................................... ACGGGTTTAGGGAGGGAAACAACCCCTCCCCCCGTTT 576 37 100.0 37 ..................................... TTAGGATAGGATTAGTTTCTTTTTGCAGCATAAGTTT 650 37 100.0 37 ..................................... AAGTTACTTATATTTACACCGAATCTACTGTTAAAGG 724 37 100.0 38 ..................................... AGATAACAACAAATGGGCATGTGCGGGACGGAGTACTA 799 37 100.0 37 ..................................... CAGCCTCCTCTATCATCTTAACAACATCATTCCGGGA 873 37 100.0 37 ..................................... ACCATTTAGGAATAATATTATCACCTGTATATTTTAA 947 37 100.0 38 ..................................... CCAGATATAGTAATGCTAATAAAAATAGCAGACGTATT 1022 37 100.0 37 ..................................... AGCAGATCCCCAAACCCCAATAAGCCTTAACGGGCTT 1096 37 100.0 37 ..................................... AAGTTGTGTCATAAACTGACACTCCTACATCATATGA 1170 37 100.0 35 ..................................... TATTTTTTCTTTGATAATCTATATTTCATTCTCAA 1242 37 100.0 36 ..................................... ATATTTGTAAATCGTTTTCATCCTCAATCAAATGTT 1315 37 100.0 35 ..................................... AAGAAGAAGGACAGGAATAAATCCGTTAAATCTGT 1387 37 100.0 36 ..................................... AGTATATCCGTGAGGCTCATCCATTGCTTAGTGCTA 1460 37 100.0 37 ..................................... ATAAGTCTGTATTTTCGTATGAGGCGGCTACAACAAA 1534 37 97.3 38 ................................A.... AAAATAATTTTCTTCTATACTCTGGTGTTATATCTCTA 1609 37 100.0 39 ..................................... TATCGTTTTCAGTTATTTCATGCATAGGCTTATAGCCTC 1685 37 100.0 37 ..................................... TTTATAGCCGATAACTGGCTTATCATTTTCCGCATTG 1759 37 100.0 37 ..................................... TAAAATTCATGTCGAATATATCTTTGGCCTCTACTAT 1833 37 100.0 37 ..................................... AAAGGACCATAGTCACAGTATACCAGTGTCGATCCAA 1907 37 100.0 36 ..................................... ATTATGACCGGCGCATAATGTCCGCATACTTTCGGG 1980 37 97.3 37 .........T........................... GCAATAACATCCGCTACGCTGGACGGGTAAGCTCTTC 2054 37 89.2 0 ......AT.......................AA.... | T [2082] ========== ====== ====== ====== ===================================== ======================================= ================== 26 37 99.4 37 GTTTAAGAGCAAGTTCCATTAAAACAAGGATTGAAAC # Left flank : CTGTTCTTGAGAAATTATCGGAGTTTTACGGATCTAGCCCCGCAAAGGCATATGGCTGTAAGGTTTAAGTGCCCTGTTACTGATTAGAAAATGGGCAAAAAACGGGATGAAAGGGTCTGGTGTACGGGAAAAAGTACAATATTTAAGGGGCTAAGAAAAGGCTGTAATGGCTGATATGTGAGGATTTTGCCCAAAAGGTCTG # Right flank : CAGAAAAATTAACAATAAATTTTCCTGTAAATGGAGGAAAACATGAAATAATGTAGAATAGATCTGTTATAAACCTTAAAGCACGGGAGGTATCGCTTTTGAAGCTAATTCTTAATACTCCGGGTCTGTATCTGTGCAAAAGGGGAGAGTGCTTTCAGATACAGACGGATGGGGAGAAACAGGATATTTCTGCAAGAAAGGTCGATCAGATACTTATAACAACAAGGGCCGCTCTTTCTACTGATGCCATAGAGCTGGCTCTGGAAAATAACATAGACATTGTCTTTCTTAAAAATACTGGCAAGCCTTTGGGCCGAATCTGGCACTCCAAGCTGGGAAGCATAACAACAATAAGAAGAAAGCAGCTTTTTCTGCAGGATGAGCCTCTTGGCCTTTGTCTGGTTAAGGAGTGGATCGGGGAAAAGCTGGATAATCAGATGGAGCTTTTAAGTAAGCTGTCCTCAAACAGGAGGGACGAGCGCAGGAGCATGGCGAAAGAG # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAAGAGCAAGTTCCATTAAAACAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.64 Confidence: HIGH] # Array family : NA // Array 1 187153-187454 **** Predicted by CRISPRDetect 2.4 *** >NZ_QPJT01000002.1 Anaerobacterium chartisolvens strain DSM 27016 Ga0244570_102, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 187153 33 100.0 35 ................................. TCTTACTGCGGCTTTTGGGGTGTCGGCAAAAGAAG 187221 33 100.0 34 ................................. AAAAAATGAATTTGTTTATGACATAAATTATATA 187288 33 100.0 34 ................................. AGGCAAGAGACATTACGGTGACCCCGGCAATGAT 187355 33 97.0 33 ....C............................ GCGCGCGGTAGTGCCAAAACAAACAGGTGAGTT 187421 33 87.9 0 ....C....................G..A...A | G [187448] ========== ====== ====== ====== ================================= =================================== ================== 5 33 97.0 34 GTCGTTCCCCGTATGGGGAGTGTGGATTGAAAT # Left flank : AATATCCTCCTCTGATGTGGAAATGAGGTGATATTGTTTGCTGGTACTGATAACATATGATGTTAATACTGAAACTGCTGCGGGCAGAAAGCGGCTGCACAACGTGGCGAAGCAGTGTAAAAACTACGGGCAGCGTGTGCAGAATTCGGTGTTTGAGTGTATTCTGGATGCGGCTAAATGCCGGGAGGTTCAAAATAAGCTTGAGGGGATAATAGACAAGAAAAAGGACAGTCTGAGATTTTACTATCTGGGGGACAATTATCGGAGCAAGGTTGAGCACATAGGAGCAAAACCGGGAGTTGATATTGAGGGGACACTTATTCTTTAGTGCGAATGTGAAGCGATCATAAAATCCCACGGGACATTCGCACCTAAAAAAATGTCGGATTAAAGTGTAATTTGGAAGGCATATAGGAATATTTTTGTGAATTGTGTTCATTTTGCTATAAAATTTGTGGATATTGCACAAGAGAGGCAATGTAAAATTGTGCAATTTCGCT # Right flank : AGGGACGCTCCCTACCTTAGAACATTTGTTCTTGACAGATTATGCCTAATCTTATATAATAGACCCAAGAGGTGGGTATAATGCCAAGAGCAGCAAGGAAAAAATCTGAAGAATGCATGTATCATATCATGTCTAGAAGCATAAGCGAGATAGACCTTTTCCAGTGCGACGAGGATAAGGACTACTATCTTGCCCTGCTTAAGCGGTATAAAGATAAATACTACTGTAAAATATACGCTTATACCCTTATGGATAATCATGTACATATTTATATAAACCCTTGCGGATATGACATATCGTTATTCATGCGCTGCCTCAACAATGCCTATGTCGCGTACTTCAACAGGAAATACAACCGCCATGGGCACCTGTATCAGGGCAGGTTCGCGAGCTCTATAGTAGACAGTGATACATACAGCCTGACACTGTCGGCATATATCCACAACAACGCTAAGGATTTGCCTGAATACGCTGGAAGAGAGGAGTTTTACAGGTATTCA # Questionable array : NO Score: 5.91 # Score Detail : 1:0, 2:0, 3:3, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTTCCCCGTATGGGGAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-8.50,-8.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA // Array 1 50178-49213 **** Predicted by CRISPRDetect 2.4 *** >NZ_QPJT01000017.1 Anaerobacterium chartisolvens strain DSM 27016 Ga0244570_117, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 50177 30 100.0 35 .............................. ATGGATTAATTAATCCGAAATATAAAAATCAATAT 50112 30 100.0 36 .............................. GATTGTGCTGCAAGGTCGGTGTACAAGCCGGATATG 50046 30 100.0 36 .............................. TGAGCTGGCAATAAGCATCAAGCTTGAGCATATCGA 49980 30 100.0 36 .............................. CCCTCAACCGTAACCACCTTTTGCAGCCAAGCATTA 49914 30 100.0 36 .............................. TAATCCATCCCTCCAATACATAATTTATATTTGATA 49848 30 100.0 36 .............................. TTGCACAATACAAGACATGTAACACCATTGCTATTT 49782 30 100.0 36 .............................. CAGATACATTTTTCTTCACATCTTTCAAATCTATTA 49716 30 100.0 36 .............................. AAACCCTTAATTATACCGTCACTATAATGGTATAAT 49650 30 100.0 36 .............................. CGAAATATGCTATTCGTAGAATCAACTACACAATGG 49584 30 100.0 37 .............................. ATTAAAGGCGCAGATGGATCAGCTGCAGCAACAGGTA 49517 30 96.7 36 .....................G........ AAGGCGGGCTTATATGGGATTGAAGGAGGGGAGTTA 49451 30 100.0 37 .............................. CCTGTAGCCTAAATAAGCAAGGCCTGTGCCGATTATT 49384 30 100.0 37 .............................. TGGATGATGTAATATGGTTCCCGGCAATGGCTGGCTA 49317 30 100.0 37 .............................. TGGCTATATTCCGGCAGGACGTGAATGTCAGCAATCT GTAAGATA [49297] 49242 30 96.7 0 .............................T | ========== ====== ====== ====== ============================== ===================================== ================== 15 30 99.6 36 GTTGAACCTTAACATAGGATGTATTGAAAC # Left flank : TTCCATATTTCCTCAAGGCAAAAACTTAGAACACTGGTACAATGAGCTTAACCATGTGGATAGCAAATATGAGAATATCCGTCGTGAATACGGTTCACGTGCTAATGTTAACCTAAATGATTACAGGGTCTTAGATTCGTCAGGCCAGATATCTCTGCTGTCCCTCATATTCCAGCTAAACCAGCTCCTTATGCTGATAAACAACCCTATACCCTTTCCGCATCAGGAATATGCCAAGATGTTTAATGATTACGGTAAATAAGTACATACTTAGTTTGAGAACATTTTCTTTCGGGGACGTTCCGGCAAGAGGGCAAAGCTGCTTTTGTTCCAACCGCCAAAAATACTAAAACCTCTGGAAACCTCACAGCGCAAGGGTTCGGAGAGATTTTCCATTGCAAAAAAAATTTCTCCAAACGACTGGAAAAAAACTGCTGTAAGTGCTACAATAAGAGGGAAAGAGGCAAAATGCCAAAAGCTGAAACCCGCATTTTATGCTG # Right flank : TATGTAACCATAACACAATGCCACACCTTGCAACACAGTTGAACCTTATCATACCATGGGAACATTTCACTCCCCCAAGCGAAGCTGAATGCCGCAGAAAACAAAGGATGCTTACCGTGTTTTCTACAAGGCAAGCATCCCTTATTGGCATGTATTAGCTCTACTTTACTTTCTTCAGCTTAATTGCCGCCGTCCATTTCCGCAAAAGCTTTGGCAGCGTTCCCTGTCATTGCATTAATCAGACTATCATCGGGAACAATGAGCCAGCTCTTTTTATCTTTGGAGTACGACAATTTAATTTCTACATCAGATGAGATTAAAGGCATATCAGGAGAAGATAAGCTGTTGTCGAAGTACTGTTTTATCAGCTCTTCACTGTTTTGATCCGCATTCTCATCACCGCTTAATGCCATTTCAAAAAGTTTGGGCATTAGCTCACTAATCATTTCAGACACGATCTTTACCAAATCAGGTGAGGTTATTTTTACATTAACGGTAGC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:0, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATAGGATGTATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.20,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA // Array 1 8679-8120 **** Predicted by CRISPRDetect 2.4 *** >NZ_QPJT01000020.1 Anaerobacterium chartisolvens strain DSM 27016 Ga0244570_120, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 8678 30 96.7 35 ......A....................... AAATACCGCTGCAATTGGCTCCGCAAATATGATGT 8613 30 100.0 36 .............................. TGTAGAGTTTTAAGCATATGCCTCCATGTCTCTAAC 8547 30 93.3 36 ...............AT............. TATTGTGATTTTAACTTGTTGTAAGTATCTTTATTT 8481 30 100.0 36 .............................. ATGTTCAGAATTGCATCGAGCTGTTTTTCTTCGTCA 8415 30 100.0 37 .............................. GCTACAGGATTTGCACCAGCTCTTACAGCCTCTTTGG 8348 30 100.0 36 .............................. AAAATATTAAACAATGTGTGCATTAAGTACTTATCA 8282 30 100.0 37 .............................. GAATCCATAAGTCCTACGCAGGCCAGAGGCAGGCCTA 8215 30 96.7 36 ...............A.............. TATAGAGCCGCTATTATACCTACAACCTTAATCTTA 8149 30 80.0 0 .......................GACCGT. | ========== ====== ====== ====== ============================== ===================================== ================== 9 30 96.3 36 GTTGAACCTTAACATGGGATGTATTGAAAT # Left flank : GCCCTATTAAGCAAGAGGAGCTTACAATTATTGTATTGTGTTTGTGTTGCACTCCGATTAGCGATATTCGGCGCTGTGCATGGGATGGACCCTGCATGGTGCTTTTTATTTTCCTTAAAAGAACATGGCGTATGAGGGGGAGGCTTTTGTGGGGCTGGAGGATATAAAGCTTTTGTGATCACTGTTTTGTTTTCGAACCTCTGGTCTTGCGGTTTCCCCCTTACGCCTTGTATATTTCAAGGAAAATATATAGGATTTTGTGAAAGGAGCGATTTATTAATGACGGAGTGTGAAGCTTTGGGTGGGGAATCATTAACGCATAAATTTTTCCAACCGCAAAAGAGGAGAAAAAGCTGAAAAGCCTTAAAGTAAGGGTATTTGAAGGAAATTTTTCTCCTTTTGAAAAATTCCCTAAAACGACTGGAAAAAAATCGCTGAAAGTGCTATAATGAGTAGGAAAGAGGGAAAATGGCAAAAGCTGAAACCCGCTTTCTATGCTG # Right flank : AGGGAACGCCCCCTGTGGCGTTCCTCTCACAAACGGATACCGCAAAAGTCAAAGCCCTGTCGAAGCTTAACTCGACAGGGCTTTAATGATCTGAAACAGAAAATTCTTCAAAGACGATAACTACACCATGTGTTTAGGTTTCTGCCAAGATACATGACATTTTCAAAATTTCAATACATTTTGATGTTAGGGTTAAAATTTTTTGATATATAAATAATAACATAATATGTATTAACATACAAATTAAATATACAACACTAAAATCTTATAAATAATAAATCAAAATATAGCACTAAAAGTAAATGTATGTATTGACATACGCCTAAATTTGGTATATAGTTACTATATTATACAAAAAATCCTTTGAAAATGTAATGTAAATAACCTTTAATTTAAAAATTAGGTATGACCTTACAATTTATACTTACGCTATATTCCTGCTGCTAAAGTTTAAAGCCAGTTCATATATAAATTTTAAATACCTAAGGAGGGTCAAAGAT # Questionable array : NO Score: 9.07 # Score Detail : 1:0, 2:3, 3:3, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATGGGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : NA // Array 1 51229-52006 **** Predicted by CRISPRDetect 2.4 *** >NZ_QPJT01000006.1 Anaerobacterium chartisolvens strain DSM 27016 Ga0244570_106, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 51229 37 100.0 39 ..................................... TGGAAACAGGAGAAAGCTTGTTGGACACTACTGTAATGG 51305 37 100.0 35 ..................................... TCATAGAGGTTGTTAATTATCGCCATAATTTCAGA 51377 37 100.0 38 ..................................... AGTATAAATTTTTTATGCATACTCTGTGCGGCTTTTTT 51452 37 100.0 36 ..................................... ATAGTATCTATATCTTCGGGATACATTTTTTTTGTA 51525 37 100.0 37 ..................................... CTTTCGCCCATTCGTCAATGGTTACGGCAGAGGAAAT 51599 37 100.0 40 ..................................... TAATACTATTTGGAATAATCCCATATCCTGGTGCTTTTTT 51676 37 100.0 38 ..................................... CTTGCTAAAACTCTTGTTACTGAAAAGTCCTGTTCATT 51751 37 100.0 36 ..................................... CTATATATAGAGAAAATTAAATTGAAATTGGATAAA 51824 37 100.0 36 ..................................... ATACGAATATAATTTCTATGACTGATGCAACATGAG 51897 37 100.0 36 ..................................... AGATCAAATCCTGCAAATCTGTTGACAGGTCAGAAA 51970 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================== ================== 11 37 100.0 37 GTTTAAGAGCAAGTTCCATTAAAACAAGGATTGAAAC # Left flank : ACTGATTTTTGATAGGAAGCTTTCCCTTGGGGGAAAGCGATGTAGCTTCTGGGGATGAGATTCATATGCGGGATTTGCTATAGGCTGCATGGTAGGGGTACTGAGAAAAAGTATCCGCGGGAGTCTGATGGGATTATATATATACTAAAATTAGATATATCGGAGAAGCGTATTGGCAACGAAGCAAAACATATGTTGATAAATAAAAGGATATATGGTAAAATCAGCGTAAAGGCAAGAAAGTAACACACCCGGATTTAAAAGCGGTGTGTTCCGGCAGATTTGCACCTTGAAAATTTCTGTTCCTGAGAAATTATCGGCATTTTACGGCTTTGGATCCGCAAAAGCACATGGCTGTAGGGCTTAAGTGCTCTGTTGCTGATTGAAAAATGGGTAAAAAACGGGGTAAAAGAGCCTGATGTACGAAAAAAAGTACAATATTTAAGGGGTCAAGAAAATGCTGTAATGACTGAAATATAAGGATTTTGCCCAAAAGGTCT # Right flank : CAATTTTTCGGATGTGACAATAATAAATCAAGGTGGAAGTCTGCTTAAATGTAGGGTCCATTAAAGCATATTATATAAAGGCCCTGCTAATCTCTGGGTCTTAATTTCTTTGTTGTCTCTAAAAACAGTTTGGAAAACGTTCCGCGATATAGAAAAGTAGTACATATTACGTGCTGCGGGCTCCCGCAACCACTAATATCAAGGCTCTCAGGGATTCCCCTGAGAGCCTTGATTATATGTTTGGACACAATTTTTTTCGGCGCGTTTGCCGCTTTCGGCTGCTTCACAGCAAAGCCTACCTCATTTCTTACGAAGCCGACAAACAAATCTATGTTAATATGTGATGATTTCTGGTAAAATAATAATATATTGAAAATAACGGTATGCGGGATGTGGTGGTTTGTATGAAGAGGCTGAAAGTAAAGAATGACTTTATATTCCAGAGGATATTCGGGCAGCCTGAAAATAAGGAAATACTGATAAGTTTTTTAAACGCGGTG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAAGAGCAAGTTCCATTAAAACAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.37 Confidence: HIGH] # Array family : NA // Array 1 2934-1887 **** Predicted by CRISPRDetect 2.4 *** >NZ_QPJT01000063.1 Anaerobacterium chartisolvens strain DSM 27016 Ga0244570_163, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 2933 33 100.0 34 ................................. GGGAGTGCAAAGAAAGGTTTTAAAATTACCTGTT 2866 33 100.0 35 ................................. ATGTGTTAATTTTATACCATCATCGAAGAAACTAT 2798 33 100.0 35 ................................. TTTATTGCCACCGCGTCCATACGTAAATGAGTGCC 2730 33 100.0 34 ................................. CGTCATCAATTTTTACCTCCAAGTCAGTTGTTTT 2663 33 100.0 34 ................................. AGTGATTTTTTAAAACTACTCATTTATAACCCTC 2596 33 100.0 34 ................................. GGGCTGGGACTACCGTCCACAGAGGCATACAAAA 2529 33 100.0 34 ................................. CTTTTGCATTGATACTCAATATTAAAAACGATAG 2462 33 100.0 36 ................................. GCCAACGACAACGGGTAGAATCAGCCGCCCGGTCAG 2393 33 100.0 35 ................................. CTTATTAAAACTAAAATTAATCACAATCATTTTTA 2325 33 100.0 35 ................................. AATATCCGCAGACTCAATCCATGTTGCACCCAGCT 2257 33 100.0 34 ................................. TGCCGTCCGTCCCCATAAGGATTTTAATGCAGGG 2190 33 100.0 35 ................................. GTTTTATAATATTCGTAGAGGTTTGGGGGCGGAAA 2122 33 100.0 36 ................................. GCAATATTTGCGAAGGACTAGAAAAAGAAGGTGCAG 2053 33 100.0 34 ................................. TTGAGGCCGTATTGGAGTATTGTAAAGCGCAGAC 1986 33 100.0 34 ................................. ATTTGTGGATTACCCCACGCAGACACCGGGACAC 1919 33 93.9 0 ...........C...................T. | ========== ====== ====== ====== ================================= ==================================== ================== 16 33 99.6 35 GTCGCTTCCCGTATGGGGAGCGTGGATTGAAAT # Left flank : TGATAAACATTGTCGGAACCAAGGAAATATTAAAGAGATTGAAAGGTTTAAAGGACTCTTTCAACCTCTCTAATGTACATACTGTAAATAATTGTCAAATAGTATGGTAATCTACTGCTAAATTTAATATAAATACAATTAACATTTTTTGCTATTTTAGCACAGTCTGACGTCCCCGGCAAGAAGGATTTTTATTTTCTATGGAGAATTAAGGTTATTATGAAGAGTCTTTATCTTTGTGGTGCGAATGTGAAGCGATCATAAAATCCCACGGGACATTCGCACCTGAAAAAATGTCGGATCATGGCGCAATTCGGCAGGTATACAGGAGTATATTGCGGAGTTGCGCTAATTTTGCCATGACACTTGTGCATATTGCACAACAAGCGCAACATGCATTTGTGCAATTTGGC # Right flank : GGGCAAGCAGGGACGGTTCTTGACTTGCGCTTTTTTTACTCAAGATTATGCTCACCCTTGATTCGCTTATGCCTCCAAAAAGCTTATGAGGCAATCCCACTTCTGTCAAACCGTCAGCACATACTCCGTTTTATTTTATCATGGCAAATAGGGCAAGACAAGAACCGTCCCTGCTTGTTCTTAATAGATATAGATTATTACCGCTAAAATGATGGCGTTGGTTTTATTGTAACCTTTTCAGGATGTGACTTCTCATAGCGATGTAGTTCCTGTCCTCCCATTGGCCCACACCGTCCAAGGTATGCGTATTTGATGTCAACATCTGATCATCAGTCATACCAGTCGTTCCGTAATTATTGCGAAAAAGAACTTAATTGTCATTTTTCTGTTCCAGCAAATCTTTTACTGCTGCCTCTAAACCCCCGTTTTTCTCTGATATTTCTGCCGTCCAAAGGAAGCCGATTAATTCCGCTTTACCTTCTTCCTCAAATGCGACAATT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:0, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTTCCCGTATGGGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.90,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : NA // Array 1 59-1355 **** Predicted by CRISPRDetect 2.4 *** >NZ_QPJT01000069.1 Anaerobacterium chartisolvens strain DSM 27016 Ga0244570_169, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 59 37 100.0 35 ..................................... AATCTTACGTTAATCAGTTCGTCAAAAGCTTCTCG 131 37 100.0 37 ..................................... TACGTCGGCTGAGTGGTTGCGTATAAGGACAGAGGTA 205 37 100.0 37 ..................................... CCTATGTTGTTAACTAAATTTTGTATGGCTGGACTTG 279 37 100.0 37 ..................................... TTTTTAGGAATCACTTGTATAAGCAATTAAAATCACC 353 37 100.0 37 ..................................... CTTCTACATATTCTATATGGTGGCTTATCTTCAATAT 427 37 100.0 37 ..................................... AATAGGTTCGCCCATATAAAATTCTTTTGTGTTTGGT 501 37 100.0 38 ..................................... CTGAGTGCCATCATCTCCGCATGTAACTTATGCTGAAT 576 37 100.0 37 ..................................... AAGTAAGTAAAAAGAAAGATATTGAGTTATGCGATTT 650 37 100.0 39 ..................................... CTCCTTTTATAATCTACCTGCCTATATAGGTTCAGGATT 726 37 100.0 38 ..................................... TGGAGATTTTTGAAACTATCTGAATATCAAAATAAAAT 801 37 100.0 39 ..................................... TCTGTGAGTATAATATACCATTCGAAAAAATAAGTGATT 877 37 100.0 37 ..................................... ATCAATCCTCCTTTATGGTCTACTCCTATCGTATATA 951 37 100.0 36 ..................................... ATTTTGCCCTTATCAAAACCCTGCTTGATGCTGTCG 1024 37 100.0 37 ..................................... TTCACAGAAAACTAATAATTTCTTGTTGTAAGAATCA 1098 37 100.0 35 ..................................... TTTGCTCAAGCTCCTTTTCCAGCCCCTTAATTTCA 1170 37 100.0 38 ..................................... TAATCATGTCTATATCTGTGTTTTTGCCGAAGGCTTTC 1245 37 100.0 37 ..................................... CCGTTCTCGATTACATTTTTGAGAAAGGCTTCAACTT 1319 37 91.9 0 .....................G.........AA.... | ========== ====== ====== ====== ===================================== ======================================= ================== 18 37 99.6 37 GTTTAAGAGCAAGTTCCATTAAAACAAGGATTGAAAC # Left flank : TAAGGGGCTAAGAAAAGGCTGTAATGGCTGATATGTGAGGATTTTGCCCAAAAGGTCTG # Right flank : CAGAAAAATTAACAATAAATTTTCCTGTAATAGATGAAAATAAGAAATAATGAAAGTAAGGATGCCTTTGACACTTCAGGCTACTTAACACAAAAGTCCCACTCATTTCTTACGCCAGCCGACAAACAAATCTATGTTAATCCGTCATGATTTCTGGTAAAATAATAATATATTGAAAATAACGGTATGCGGGATGTGATAGGTTGTATGAAAAGGCTGAAGGTAAAGAACGACTTTATATTCCAGAGGATATTCGGGCAGCCTGAAAATAAGGAAATACTGATAAGCTTTTTAAACGCCGTACTGGAGCTTGAAGGAGATAAACAGCTTGAGGACATTGAAATAATAGAAAATACACGCTTAAAAAAGGAAGGGATAAACGACAAGCTGGGCATACTGGATATAAGGGCCAAAACCATGCTTGGAGAGCATATAAATATAGAGGTTCAGCTTGTAAACCAGTACAATATGGATAAACGCACTATATTTTACTGGTCTAA # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAAGAGCAAGTTCCATTAAAACAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.64 Confidence: HIGH] # Array family : NA // Array 1 264-1626 **** Predicted by CRISPRDetect 2.4 *** >NZ_QPJT01000070.1 Anaerobacterium chartisolvens strain DSM 27016 Ga0244570_170, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 264 37 100.0 36 ..................................... AAGGTTTTGAAGTTCATTTTTCCATTTGCGGAGAAT 337 37 100.0 38 ..................................... TTTTTAAATGCCCATCCCATAGCTTGTGTAATACTTTT 412 37 100.0 36 ..................................... TACGTCCGCTTATGGAATCCGCAGAAATCACAGAAC 485 37 100.0 36 ..................................... TCGCATTATCCCCAAACTCCCAATGCATAAAGCGGT 558 37 100.0 36 ..................................... AGGAAAAAGTCGATGTTAAAGTCATTAGTGAACTGC 631 37 100.0 38 ..................................... AAATCTATTCTTGCAAAATACGGTCTACCTACAGAATT 706 37 100.0 37 ..................................... AGGATAAACATTGGAGTCATAGAGCCTTCCGTGAAAT 780 37 100.0 36 ..................................... CCAGCATTTGTCAAAATGCTAGTATTAAGTAATGCT 853 37 100.0 35 ..................................... ACAATTCTTTTATGTTTGCCGGGGCCTGTCAAGAT 925 37 100.0 36 ..................................... AGGAAAAAGTCGATGTTAAAGTCATTAGTGAACTGC 998 37 100.0 38 ..................................... AGCTTGTTATCGTACTGGGTAATAAGCAAAATCATTGG 1073 37 100.0 37 ..................................... ATCTCCAGAGATAAACGCTTACATTGTGTCATTTGTT 1147 37 100.0 36 ..................................... AAGAATCCCCATCCGGCACAAAATACCGCACATCAT 1220 37 100.0 37 ..................................... TTCATCCTTCCGGGGCGATAAGCCCCAAACAAAATTA 1294 37 100.0 37 ..................................... GTGCAGACGAAACAGTATGGAGAGGAAAATTGTATAG 1368 37 100.0 37 ..................................... TACCAATTTTAATATGTTTGGGCAGGATGGTCGTGTT 1442 37 100.0 38 ..................................... AATAAAGCCCACTTCTCTGGCTCATGGTGTGGTAGTGT 1517 37 100.0 36 ..................................... CGTTATACATATTAAACACTCCTTCAAAATAATTTT 1590 37 91.9 0 .....................G.........AA.... | ========== ====== ====== ====== ===================================== ====================================== ================== 19 37 99.6 37 GTTTAAGAGCAAGTTCCATTAAAACAAGGATTGAAAC # Left flank : CTGTTCTTGAGAAATTATCGGAGTTTTACGGATCTAGCTCCGCAAAGGCATATGGCTGTAGGGTTTAAGTGCCCTGTTACTGATTAGAAAATGGGTAAAAAACGGGGTGAAAGAGAATTAATTCCGGGACATTCCTTATCGCAAAAGGAATACCCGTGAATCTGAAAAGGTATGTCCCGATACCATGTTCAAAAAGTACAATATTCAAGGGGCCAAGAAAATGCTGTAATGACTGATATGTGAGGATTTTGATCAAAAGGTCTG # Right flank : CAGAAAAATTAACAATAAATTTTCCTGTAATAGATGAAAATAAGAAATAATGAAAGTAAGGATGCCTTTGACACTTCAGGCTACTTAACACAAAAGTCCCACTCATTTCTTACGCCAGCCGACAAACAAATCTATGTTAATCCGTCATGATTTCTGGTAAAATAATAATATATTTACAATAACGATAAACATACTGGATTTCAGCTATATAGATGTGGACAGCTACAGCACAGTGTTTCACCTGTGGGAAGACAGGCACAAGGACTGCAAGCTGACGGACATAATGGAGGTAAGGTTTATAGAACTGCCCAAGTTCAGGAGGGCAAAGCCGGACTTAGGAAAGCCGCTGGACAGGTGGCTGGTGTTTATTGAAGATTCGCCGGAGGAGGTGCTTGAGATGGCAATGAGAGAAGAGCCTGCAATAGCAAGGGCTGAAGAGGTGCTTCAGTATCTTGGTAGTTTCGATGAGATAAGAAGGTACTATGAAGCGCGGGAAATGG # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAAGAGCAAGTTCCATTAAAACAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.64 Confidence: HIGH] # Array family : NA // Array 1 175015-176126 **** Predicted by CRISPRDetect 2.4 *** >NZ_QPJT01000009.1 Anaerobacterium chartisolvens strain DSM 27016 Ga0244570_109, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 175015 33 100.0 34 ................................. TTCATGGCCCCAGTCATGGTGCCGGTAGACACAT 175082 33 100.0 34 ................................. TTTTCTGTATTATTCATCGTGCCAACCTCCTAAA 175149 33 100.0 34 ................................. AAGCCTAAGGTATCTCTTAGGGTTTTTAGTAAGA 175216 33 100.0 34 ................................. TCAACATAATCCCTTGTAACACCAACCTTTTTAG 175283 33 100.0 35 ................................. ACAAACGAGGATAGCGGGGAAAGGGTGGAGGGCAC 175351 33 100.0 35 ................................. AATTGTTTTTATCCTGCCTGCATGGTCGTTTAATC 175419 33 100.0 34 ................................. TGTTGTGCTTTGTACAGTGGACGGAGATATTAAG 175486 33 100.0 36 ................................. AAAATGGACATAGAAAAATCATGCAGGAATTGCAAG 175555 33 100.0 36 ................................. CACGCAAGAAAAACACCCATTACAGTTACACCTAAA 175624 33 100.0 34 ................................. ATAAACTCATGATGAATCATAATGTGCATGGTGG 175691 33 100.0 34 ................................. CTATTGCTGACGAAGTAAAAAGGATATGTGATTG 175758 33 100.0 34 ................................. AAACGTCTACAAATGAGTGTATACAGCTATGATT 175825 33 100.0 35 ................................. AGATGGATTTGACGGATGAAATGGCAAAAGAAATA 175893 33 100.0 34 ................................. ATCGGGAAAAGGATTATGAAAGTTCGGGTCAATG 175960 33 100.0 34 ................................. TCATGGCGTGTTTAAAGCTCAATACCTGTGTGTA 176027 33 100.0 34 ................................. GCTGTCCGTGAGATAATCGAAATCAAAAATGGTT 176094 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ==================================== ================== 17 33 100.0 34 GTCGCTTCCCGTATGGGGAGCGTGGATTGAAAT # Left flank : ACCACCACAATCACAGTAAAAAGCTTTTTCTTTTTGAACATAAAAATAGCCCCCCTTGTTAATTACGGTATAAGAAATTGATGTGGCGGCTTACGGCCACTCTCAACCGCATACATAATAATAGATTTGTATGAAATAATAGCAATGATAATTATACATATGTAATCAATTTTTGTCAACATATGCAATAATTTTATATATGTTGACAAAAATTGTAAATATAGAGGAGAAAAAGAAGACTCATTTTTGTTATCAGTTTATAAAGCTTGGAAGGATTTTTACTTTCTATGGAGAATTAAGGATATAGGAAAGGTCTTTAGCATTGCAGTGCGAATGTGAAGCGATCATAAAATCCCACGGGACATTCGCACCTGAAAAAATGTCGGATCGTGGCGTAAATCGGCAGATATACAGGAGTATATTGCGGGGCTGCGCTAATTTTGCTATGAAACTTGTGCATATTGCACAACAAGCGCAACATGCATTTGTGCAATTTGGCT # Right flank : TTACTCGGTGTCGTTGGTAAAACTGTGAAATGTGGGTCGCTTCCCGATACTTGAAGTGCTGTCAGAAACTCCGTCCCATTGATACATTATTGTTGAACCTTTTTCCTTTAAGATAGAAAACCCTCTGATTTCACTTGGATTTTATTTTTTATATAATGTATATCCAGTATAAAACAAGATTCCAATTATAAACACTATTATCCCAAAATACCCTTTTGCATCACTATATGAATAGCCACGATTTTCATAGAACAAAACAAAACCCAAATATGCAACTCCAGAAAAAATAAACAACAGAATCAAAATTAATAATACAAAATACTTTTTCAATAAAGCTCCCCCCTAGACTATATTCCACGCACCGAACTGGCTCACCTTCTGTTTTATTTTATCATGGCAAACTGGGCAAGGCAAGAACCGTCCCTGCTTGCGCTCCCAACAGAAATAGGACTGACCTAATCACAAGATAAGTCAGCCCTATTTGTCAACAGCTTTGGTGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTTCCCGTATGGGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.40,-4.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.37 Confidence: HIGH] # Array family : NA //