Array 1 8750840-8741229 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP017173.1 Myxococcus xanthus strain MC3.3.5c16 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 8750839 37 100.0 35 ..................................... GTCTGCCACCTGGGTCATGACTTCCTCGGCGGGTA 8750767 37 100.0 33 ..................................... GTCGGTCATCCACGCTCCCCAGAGAGAGGAGTT 8750697 37 100.0 33 ..................................... TGTACGGGCAGCCCGGCTCTGAGCAGCCGGTCC 8750627 37 100.0 38 ..................................... ATCGAGGCCGCGAAGCCTAAGGCGTCGCTTGCGTGGCG 8750552 37 100.0 35 ..................................... CCCGCTCCACCTGGGCGATGGCGCGGGCATACCCA 8750480 37 100.0 33 ..................................... CTCTGGCACGCGCAAGGCGTCGGGTCGCGGCCC 8750410 37 100.0 33 ..................................... CCCAGCGTGCGGCGAAGGCACGCATCGACGAGA 8750340 37 100.0 34 ..................................... TCCTGTGCTGCGTTGTTGCCCCCGGGCACGGTGC 8750269 37 100.0 33 ..................................... ACGTTGCCGCCGAGCCCCACACCGGTGCTCTTG 8750199 37 100.0 33 ..................................... ACCTTCGACCGGTACGTCACCACGACGTGGCCG 8750129 37 100.0 32 ..................................... GCCCAGTGTGGACATCCCGAGGAGGCGCCCGG 8750060 37 100.0 34 ..................................... TCGCCCAACGTCCCAGCGGTGTGGATGACTGCCT 8749989 37 100.0 35 ..................................... GAGGGAGTTTGGCGCTACGCGTTGCAGCGCGGCGC 8749917 37 100.0 37 ..................................... CCACCACCGCGGCGGTGAAGACCTTGCCGTCCGCGGT 8749843 37 100.0 34 ..................................... CAGGTGCTCACGAAGCGCGCTGACCGGATGCGGG 8749772 37 100.0 34 ..................................... GCCGTCATCCACCCCCACTACCCGCACGAGGCCA 8749701 37 100.0 37 ..................................... TGAGTCCTCCCTCGCTGTGACGTGCGCGCGGGCGGTG 8749627 37 100.0 34 ..................................... AGCTGCGTGGCAACGTCATGCCTGTGAGCTCCAG 8749556 37 100.0 32 ..................................... AGCCCATTTATGGTGATGCTCAAGCCCGGATT 8749487 37 100.0 34 ..................................... GCGCAGGTGGCAACACGGACGGTAATCACTCAGG 8749416 37 100.0 33 ..................................... CAGGACTCGCACTCTGGACACTCCACATCGGCG 8749346 37 100.0 35 ..................................... TTCGCGGACTGGGCCGCGGACGCGATGACGCGCCA 8749274 37 100.0 33 ..................................... GCGAGGTGGTCGTTCACGCGCGCCAGCTCGATG 8749204 37 100.0 33 ..................................... GCTCCACCGAAGCGTGTGAACTGATTGAGCGCC 8749134 37 100.0 36 ..................................... GCCGCACCGTCCTCGTCGACAACACGCCGCCCACCA 8749061 37 100.0 33 ..................................... TAGAGCGGCAGGCAGGGCACGTGGGCGCCTTGT 8748991 37 100.0 33 ..................................... GAATCGCAGGACGCGCAGGATGGCCCGTCCTCA 8748921 37 100.0 37 ..................................... AGTTCCGCCTCCGGCCAGCGAAAACGGACCTTGGAGA 8748847 37 100.0 33 ..................................... TAACATCCGCAGTAACTTCATCGTCTTCGACAT 8748777 37 100.0 33 ..................................... GCGTCCGCGTCAGAAGAAAGCCGCGTCTGCTCC 8748707 37 100.0 38 ..................................... ACATAACTGGCGTTGCCCGTGTACGTGCCCCCACCGCG 8748632 37 100.0 32 ..................................... CGGAAGGTGAACTGGCGGAAGACCCACATCAA 8748563 37 100.0 37 ..................................... TGCGCCAGGGCCACGCCCAAGAAGAGCCCCCAGTGCA 8748489 37 100.0 36 ..................................... CGGTAGTCGAGCTCCGCCTGACGTGCCTGCCAGTAC 8748416 37 100.0 35 ..................................... CCCGCCTCGACGAAGGGGTACGAGAATGCCGGCCG 8748344 37 100.0 34 ..................................... ATCGCAATCCGCTACAACGCGATCGAGGACCACG 8748273 37 100.0 35 ..................................... CCACGCCTTCACCGGCAGCCCCTCCAGATGCGGCG 8748201 37 100.0 34 ..................................... ACGTTCGGCCGCCCCTTGCGAGGGCCGGACTTGA 8748130 37 100.0 33 ..................................... TCGCAGGAGAGGATTGCGCCAACGGTGAGCATC 8748060 37 100.0 32 ..................................... GCGACGAAGGAGCCCACCAGGTTGTGCTCGCG 8747991 37 100.0 34 ..................................... CGCTTGGGACGGTGATGGGCAGGATCGATTCCAC 8747920 37 100.0 32 ..................................... CACTCAGTGGCGAACCCGAGACCGCCCGGCCA 8747851 37 100.0 33 ..................................... ATGAGCTGCCGAATCGCGAGCCCGGTTGCGTCC 8747781 37 100.0 33 ..................................... TCGGGGGGCGAGGATGCGGCGCCCTTCGGCTTG 8747711 37 100.0 32 ..................................... TTGAGCCAGTGGCGGATAGCGCGGGCTACGCG 8747642 37 100.0 33 ..................................... CAGCGCCCGCTCAATCATCTCATCGTCCGTTTG 8747572 37 100.0 32 ..................................... CAGCTTCCGCCGGAGCTGCGCCCGCCGGCAGA 8747503 37 100.0 33 ..................................... AAGCGCCGCATGGGCCAGCAGGTGGACGACGTC 8747433 37 100.0 32 ..................................... GGCGTGGGCGTCGGGGCGATGCGGGCGCGGGT 8747364 37 100.0 35 ..................................... TCCAGCAGGGCATCCACCACAGCGACCAGACCCGG 8747292 37 100.0 34 ..................................... ATGAGAGGGCGTCACGTTCTCGCTGCTCGGCTCG 8747221 37 100.0 33 ..................................... GAGGGCGGGCGAACACCTCGCGCTGCCTCGGCG 8747151 37 100.0 33 ..................................... CCGATGACGGACCGGGCCGCGTACGGGGACGTC 8747081 37 100.0 35 ..................................... GATTGGTGGATGACACCTGAGCCACGAGACGAGCG 8747009 37 100.0 34 ..................................... TCAGCCCGCGAGAGGAAGGCGAGCGCGTACATCT 8746938 37 100.0 34 ..................................... AAGAGAGCTGGCCCGCCGGTCGTGGTGCTGGGCA 8746867 37 100.0 35 ..................................... CTCGCGGCGCACCGGCGCAGCTCCGCGTTCATTCG 8746795 37 100.0 33 ..................................... CGAACTCGCGCATCCTGGGCGTCACCGCGACGC 8746725 37 100.0 34 ..................................... CCTCTCCCGTGCGGAAGGCAGCACATGGCTGAGA 8746654 37 100.0 34 ..................................... TCCGCCGCCATGGCATCCAGCGTCAGCTCCAGCT 8746583 37 100.0 33 ..................................... TCCCTGGCCATCAGCGCCTCCGCCGACGTGACT 8746513 37 100.0 35 ..................................... CCAGTAGCTGCGGGGCGTGTCGTTCATACAATGTC 8746441 37 100.0 34 ..................................... CCTGAGCGCGGCAGACGTCGCTGCAGCTTGGAAA 8746370 37 100.0 33 ..................................... CTGGCCGAGCGTACGAAGGTGGGCGGCCAGAAC 8746300 37 100.0 34 ..................................... CGGGCCTGGGTGGTGCGACGGTAGACGGCGGGGA 8746229 37 100.0 37 ..................................... TCCACCACCTTGCTTGGCGGAGTCGTCCAGACGTCCT 8746155 37 100.0 35 ..................................... CCTTCGACGACGCGGCCCTCGGTGCTCCAAGTCAC 8746083 37 100.0 33 ..................................... ACGTTGAAGCTCTTGTGCTTTGTGCCCACCGAC 8746013 37 100.0 32 ..................................... TACGACGCGGTGAGCGCCCACCTGCGCATCAA 8745944 37 100.0 35 ..................................... TCCCGGTAGGCGACGAGGACCTCACGGGTGCCGCG 8745872 37 100.0 32 ..................................... CCCATTTCCGCGCTGATACAGCTCGACACCTG 8745803 37 100.0 35 ..................................... TACGGAGTGAAGGACTTCACGGATACCGCCCAGAG 8745731 37 100.0 32 ..................................... CGCAGAAGCTAGACAGCACCCGAGCGCTCGTC 8745662 37 100.0 33 ..................................... AGCACCCTCCATTCTCGGCGCCCTCATTGAGCG 8745592 37 100.0 36 ..................................... GCCGGCTGGAGCCCGCCCGGGTGGCGGCATGAAGAA 8745519 37 100.0 32 ..................................... GAGCAGTGGCGGGGCAAGCTGGAGCTGCTGGG 8745450 37 100.0 37 ..................................... ACGAAGTCCAGGCCCATGTAGCGCGCGAGGTCGCGGC 8745376 37 100.0 33 ..................................... TCCTTCGGCGTCTTCGCGTGGAGTGCCAACGCT 8745306 37 100.0 35 ..................................... GCATTCCCGGGTTGTCTGTACTCCTGGCTTGCCAT 8745234 37 100.0 32 ..................................... GGCGTGGGCGTCGGGGCGATGCGGGCGCGGGT 8745165 37 100.0 35 ..................................... CGTGGGCCGCCGCCGCCAGCCCTGACCCTCGCAAT 8745093 37 100.0 36 ..................................... GCCGACACACCCCAGGGCTGGGCCCAGCGCTGGCAG 8745020 37 100.0 34 ..................................... CGCCGCTCCGCGCCTGGCGCGGCTTCAGCGTGTT 8744949 37 100.0 34 ..................................... ATCCAGGATGATGCTCGTCACGAGCGCCCGGTTG 8744878 37 100.0 33 ..................................... GCCTGGTGTTGGGGGACTGGCGACGATTTTACG 8744808 37 100.0 33 ..................................... TCCTCGGCGGGAACCTGGGCGGGGGCCCCGTCC 8744738 37 97.3 33 ......................G.............. ATCGTCGACAACCTCACCGAGATTGACCTGGAC 8744668 37 100.0 36 ..................................... GCTGCGTCATCCGCCTTGGCCTGCCCCTCCTCGGAG 8744595 37 100.0 32 ..................................... TTCTCGGGGGCGATGGGGGCGCCGCCTACGAT 8744526 37 100.0 33 ..................................... CCGCCCTGCACCCGTGAGCGCGGGAATCCCCAG 8744456 37 100.0 33 ..................................... CGGAAGTCGACGGCCACTTGGTACTGCGCGCGG 8744386 37 100.0 32 ..................................... CTCCCCCATGATCATGGCCCGGAGCCCCGGCG 8744317 37 100.0 34 ..................................... GGGATGATGGCGTCCTCGCGGACTGCCAGGAACT 8744246 37 100.0 35 ..................................... CCTTCGACGACGCGGCCCTCGGTGCTCCAAGTCAC 8744174 37 100.0 33 ..................................... GGGTGCAGGAGCCGCCACGGAGCGAGTTCACGT 8744104 37 100.0 33 ..................................... AACGCCCGCGCGGCGAAGGCCCTGGAGCGCGAG 8744034 37 100.0 35 ..................................... GCCCTCTGGCGGGTGGCGCTGCGTGAGAATGCAGT 8743962 37 100.0 34 ..................................... ACTTCGGCCGCCATCGCCTCCAACTCCGTGAGGC 8743891 37 100.0 35 ..................................... AAGAGGCTCGTACAGCGCCAGTTCGCCCGTGCGAG 8743819 37 100.0 33 ..................................... TCGGCAATGGTCCGGAAAGCGGCGCAGCTAGTC 8743749 37 100.0 35 ..................................... CCGGCTTCCAAGCCCTCCTCGCCTAGTCATGTCCA 8743677 37 100.0 32 ..................................... TAAAGGGCCCTCGTGATGCTGGACGACGACGA 8743608 37 100.0 35 ..................................... GCGCTCGCGGCCCGGTGTGACTTGGACGGCATCCG 8743536 37 100.0 33 ..................................... GGCAAGCACCGAGTTGACCGTCGAAGCCGCTCT 8743466 37 100.0 33 ..................................... CGCGTTGAGCAGTACCGAGGCCTCTTGGAGCGC 8743396 37 100.0 34 ..................................... CGGCAACTCGACGGTGCCGCCCGATTCTCGCGCT 8743325 37 100.0 35 ..................................... TGGTAGGGCATGTGCGTGTCTCCTCACTCCGCAAC 8743253 37 100.0 32 ..................................... ACCGCTACCAGGACTACCTCTTCGCCGTGAGA 8743184 37 100.0 35 ..................................... CGCTACCCTTCCGGGTGCAACTCACGGGAGGACGT 8743112 37 100.0 34 ..................................... ATCAAGAACCTGGTGCTGCTGTGGTGCCACGACA 8743041 37 97.3 35 .......T............................. CTCCAACGCATGCGGCCCAAGAAGCGCAAGCCGAA 8742969 37 100.0 34 ..................................... ACCGACGCCAGTCCCCTGCGCGACGGCCGCCCAG 8742898 37 100.0 35 ..................................... GCATGTCTATCTCCTACCACCGAAAGAGGCGCCCG 8742826 37 97.3 32 .....................A............... GCGTTGAGGTAGGCCTGCTGCATCCTGGAGAT 8742757 37 100.0 34 ..................................... TTGGCGCTCCGAGCCGCAAGCATGGCATCGGCCA 8742686 37 100.0 33 ..................................... CCTCCAGGCGGCACCCTCCAGGACGCCGGCCCA 8742616 37 100.0 33 ..................................... TCCTCGTGGTAGCGCGCAGTAGAGTCGTCGCCA 8742546 37 97.3 35 ...................A................. CTCTCGCACAACGCGAAGCGCGCGGACCCGGAGGC 8742474 37 97.3 36 ...................A................. CGGAGAAAGTCCGCGTAGACCTTTGCCGGCGTTGAA 8742401 37 94.6 32 ..T................A................. TTCTTCAAACAGTGGGGAGCGTGGGCGCCTCG 8742332 37 97.3 32 ...................A................. CTCTCGTGCGAGCCGCTCCTCGGGCCGGTGGT 8742263 37 97.3 37 ...................A................. ATCAACGTAGAGGGGGTGATGGTGGAGCAGCTGCGCC 8742189 37 97.3 34 ...................A................. CCGTGCGCGTCGCGTCCGCGCACCACCGCGTAGT 8742118 37 97.3 31 ...................A................. TGGGCCTTGTTGAGCATGGAGATTTGTCGTC 8742050 37 94.6 33 ...................A...A............. CCCAAGCGCAGGCAGCGCCGGGAAGGCCGCGCC 8741980 37 97.3 34 ...................A................. CCGTTTCGAGAATCACTCATGGCAGAGAACATCA 8741909 37 97.3 32 ...................A................. CCGAGCACCATCTGCGAGCAGCCATGGTCCAG 8741840 37 94.6 36 .C.................A................. TCGAACAGAGCCACGTCCTGTGTCCTCCGGTGTCGC 8741767 37 94.6 33 ...................A....A............ CACGCACAGAACAGAAGGTGCGCCCGGCGCGCG 8741697 37 97.3 35 ...................T................. CACGTGCACCGCGAGGTGGTGGCGAACCTCCGCAA 8741625 37 100.0 36 ..................................... TGCGCGGCCTCACGCGTGTTCCACTCGGCCTGGTCG 8741552 37 97.3 33 .................A................... CACACGTGCCTGCGGGCAGGCGCATCCGTCGTG 8741482 37 97.3 35 .................A................... GCCAGGGTCGGGCAAGACTCGTGGCCGGGGCTATG 8741410 37 97.3 37 .................A................... ATCTCCGTAGTTGGCCGAGCTGTGGACAACCTCTCGG 8741336 37 91.9 34 ..........A......A.........A......... GTTTACGGCACCTTCCACGAGTCCAGCCTGTACG 8741265 37 91.9 0 ...................A...........C....G | ========== ====== ====== ====== ===================================== ====================================== ================== 136 37 99.4 34 GTCGCTCCTCGTGAACGCGGGGAGCGTGGGTTGAAAC # Left flank : CTCCCTTCGCGATGCGCTGATGCGTAGATTGACCGTGTTGATTTGTTACGACGTGCGGGTGTCGGACCCCCAGGGGCCTCGGCGCCTGCGCAAGATCGCGCGGGCTTGCAGAGACCATGGCGTGCGAGTGCAATACTCCGTCTTCGAGTGTGTCCTGGAGCCCAAGGACTGGGTCGTCCTGCGCGCCCGCCTGCTCGGCGCATTCGATTCGGAATGCGACAGCCTGCGCTTCTACTTCCTGTCGGAAGACGATGCCCGAAAGACGGAGCATCATGGCGCCAGGGCCCCCTTGGACGTCGAGGGGCCGCTGGTCCTGTAGGCCTCCGCGAACCGGCCCCGGTGTGCGCTCCGTCGAGGGTTCGCGCTCTTTGAAATCCCGAATAGAATCAGCGAGTTGGGTGAGTGGGGGCAGGAACGGCGGGGCGCTTTCGTGGCCGCGCAGGCCGGTTCGCGAAATTCGGCCGGATTCCGTAGTCAGAACGCTATGTTGGAGAGGCAGA # Right flank : CACCCAGAGCACTGGAGTCCCGGTGCCTCGTCCTGGTCACTCCTCATGAACGCGAGGACTTTCTCGCGCTTCAACTGGTCCGAAAATTGGGGAGCAGATCACGAGGACCCGCTCGTGCTCAGGGGCCAGAAGTCGCCGGGTATGCCCAATACACAGCACTTCTGGATCGAGGTCTTCGGGATGGCCGTTTCAAGCGCAACGGCTCGCTCCTATCCGACGTGAACGCGGCCGACGCGCATCGGCTCACGACGTTGCTCATCGCCGCGCGCCGGCTGGACGAATACAAGGAAGATCGCAGCGCCCCTCCTCCCTTTGTACATGCCCGGCAGGTGACGACGTCCGAATCCACCGTGGACGGCCAGCGCACGCGTCTGACGTTGGACATCGACACGCCGCCCGACACCCTCCGCGTCATGCAGCAGGTGGCTGCCGCTTACGGCATCGAACTGTGAGCGCGAGGACCCCGGGCGCCCCAGGGCTGGAGGAACACCTCCGTCTCC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCTCGTGAACGCGGGGAGCGTGGGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCTCGTGACCGCGAGGAGCGTGGGTTGAAAC with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-9.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [17-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 9029793-9026744 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP017173.1 Myxococcus xanthus strain MC3.3.5c16 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 9029792 36 100.0 36 .................................... TTTCGCAGGTCCACCGCGCAGCGGCAGAGGTGCCAG 9029720 36 100.0 35 .................................... GGGACAGGACTGTTCAATCGGCCAAGTCTACGACC 9029649 36 100.0 33 .................................... ACGGTGGATGTATGACACCGCGCGCGTCCAGGC 9029580 36 100.0 35 .................................... ATGCGCTCGCGGGCGGACGCAACCTCCGGGAGGTT 9029509 36 100.0 36 .................................... CCCGCGACTAGCTGAACAGCAACGCAACGCACAGGA 9029437 36 100.0 34 .................................... TCCCAGCCACCTCAGCCCGCACCTGAGCCACCAG 9029367 36 100.0 35 .................................... TCTAGCACTCCGAATTCAACACCCTCCGGGTCAAG 9029296 36 100.0 35 .................................... CTCGGGGCCGGCGCTCACGTAGCGCAGGGAGCATC 9029225 36 100.0 37 .................................... GTCTCGAACCTCTTCGGCGGCGCGGCGGATGTGCTTC 9029152 36 100.0 36 .................................... TTGATGTCCAGCGCCTCCATCAAGAGCGCGTAGGGG 9029080 36 100.0 34 .................................... CTGGAGTCCCTGGCCGAGGGGAAGACGGGCGAGA 9029010 36 100.0 34 .................................... ACGAGCGCGCGGTACGACAGCAACGCCGCGCCCT 9028940 36 100.0 35 .................................... GGCGCCCCAGTGCTTCAGGACGGCATGCAGGACGT 9028869 36 100.0 36 .................................... TCCCAGCCATGGCCTTCTCGATGAAAGGCGCGGGCC 9028797 36 100.0 37 .................................... GAGCACCCGCATTCGGAAGTGTGTCAGTGCGTGACGT 9028724 36 100.0 35 .................................... TGTCTGCGCGCGTCCAGCGGCGAGTGAATCCGCCT 9028653 36 100.0 35 .................................... TCCTCGTTGACGTGCCCATCCTGAACATCTTCAAG 9028582 36 100.0 34 .................................... AGTTGAGCATCGGGGTAGTGGGCAGCAGCTTTCC 9028512 36 100.0 37 .................................... ACCCACTTCCAGCCGCGTTGGTCGCCCTGCACCACCT 9028439 36 100.0 35 .................................... GTGGCCCCTTCGCGGTCCCGCAGGTACAGCTCGGG 9028368 36 100.0 39 .................................... TTGACGAGCAGCTTGCGCAGGCGCTGGGGCACCTTGCGG 9028293 36 100.0 33 .................................... TTCCTGCCGTACCTCGGGGCGGGCATCCAGGGG 9028224 36 100.0 37 .................................... TGCTCGCTCCTTTGGGAAATGCTGTTGCGGATGATGG 9028151 36 100.0 32 .................................... GCCGAAGAGAATCAGGGGACACCGGAGGCCAC 9028083 36 100.0 39 .................................... ATCTGCTCGACGGCGAACTTGCCGACGCCGACGCCGCGC 9028008 36 100.0 33 .................................... CCCAGGAGCCCCTGGCGCAGCGTCACCTCTTGG 9027939 36 100.0 36 .................................... AAGTCATACGCCGCTTCATGTGGCTTGAGTGCATCT 9027867 36 100.0 36 .................................... AAGTCATACGCCGCTTCATGTGGCTTGAGTGCATCT 9027795 36 100.0 34 .................................... CGTTCATACGCTTCCGCACACCACTTGGAGGTCA 9027725 36 97.2 37 .....A.............................. TTCTCAGGCACCTGCGGCATTCTGATGGTTCCGCGTT 9027652 36 100.0 35 .................................... CGGACCTCCAGCGCGAGCGCGTCAAGCCAGTGCCC 9027581 36 100.0 35 .................................... CCCTGCTGCAGCCGCAGTGGCGCCAACATGGCCCC 9027510 36 100.0 36 .................................... CCCTTCAACGCGCCGGCCGGACTCGTGGAGTCCATC 9027438 36 100.0 41 .................................... AAGTTCAGGGTGCCGCCGTGATACAGCGCCAGCACACCGAC 9027361 36 97.2 39 .......................T............ ACACCACGGGCGATGTCTGCGAGAGCAGCCTGGGTCATC 9027286 36 100.0 40 .................................... ACATCGGCCTGATGTTCGGTGATGCGCTGGCCCTTCTTCA 9027210 36 97.2 36 .........A.......................... TATGACAAGCTCGTCACCAACTGGGAGGACTGCTAC 9027138 36 97.2 35 ...........................T........ TTGCCGCTGTTCGCCTGCTCCAGGCGCTGGCAGAG 9027067 36 100.0 36 .................................... TTCACCAAGGGCTTCTTCGAGGCCACGGTGGTGCTG 9026995 36 97.2 34 ..T................................. TACCCTGTCGTGGCGTTGATGGTGGCGCGATGAG 9026925 36 97.2 40 .........A.......................... CCGAGATGGAGGAGTTGGGCAAGGCGGCGACGGCGCGCAT 9026849 36 100.0 34 .................................... AGTCCGTCCACCTTGGCGTCGCCGATGATGCGCG 9026779 36 94.4 0 .................................T.A | ========== ====== ====== ====== ==================================== ========================================= ================== 43 36 99.5 36 GTCCCGCTCGCCGTGATGCCGAAAGGCGTTGAGCAC # Left flank : TGACCCGCGGCGGTGGCGGAAGGTGCATGCCCTGCTCAAGGGCTATGGGGAGTGGTTGCAGCTCTCCGTGTTCCGCTGCTCGCTGACGGACCGGGACCGGGAGAAGCTGCGCTGGGAGTTGTCGCGGCGGATGGATGCCGTGGATACGTTGTTGGTGATTGGGCTGTGCGGCGGGTGCGTGGAGCGCGTGCGCACCATCAACGCGAAGGAGGACTGGCCGGAGGAGCCCGCACCGTTCAAGGTGCTGTGAAGTAGGCGACAATCAAGCACCTCGCCGTGGCGGAGGCCCGCGACGGCGAAAACGGCGGATTTCTTTGTGGTTTCATGGGGTTGGGGCTCTTTGACAGGTGAATAGGTGCATGATCGATGAAAAGCCGAGTGGTTTCATGGAGTTGGCGATTCTGGGTAGGGCCTGGGACAGCCAACCTGGGGGAAGGAGGGGGAGATGCTTGAAAGGGGGCTTGTAAGGTGCCGGAATTGCTGGGAAATTCAGGCGGGCT # Right flank : TTTTGCGAGAACGTCAGGGACTCTGTGAAGTGGTCGTGATGGGGGCGCCCTGGGCACATCCCAGCGTCTGAAAGAGTCGTTGACCGGACGCCTATTGCCCGCGCCCCCGCTTGTCGCCTTGTGGACGCCGTTAGCAGCGGCCCTGACCCCAGGTGGCCCCCTTCAATGCTTCAGTTCGTGGACGGTAGCCGTAGGGCCTTGCCGAACCCTTCGTTCAGTTCTCTCTGGAATGCCGGAAACCGTGAGGTGCGCGTGCGCAGGGCTTCGGCCCACGCGGGCAGCGCGGCTGTCGTCACGGGGTCGGCCTCGAGTTCCACGCAGCACGCCACGAGTATCGCCGCCTGGCGATAATGACCGTGCCGCTTCTCACGGAGGATGTCTTCGGTCCTTCGCGTGGCGGCGGCCTTCATCGCCTCGAGCAGCGTCCGGCGGTCCGCTTCCGAGCATCCGCTCATGACCCCTGCGCGCTGAAGCAGGTCGCGCAGCGTCGGGGTGGGGAG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCCGCTCGCCGTGATGCCGAAAGGCGTTGAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.90,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 3 9061372-9058233 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP017173.1 Myxococcus xanthus strain MC3.3.5c16 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 9061371 36 100.0 34 .................................... TAGCTGTCGGTGATGCAGGGCAGCACGTTGGTAA 9061301 36 100.0 37 .................................... GTCCCGCCGCGGCGAATCACCACGCTGTCGCCCTGGT 9061228 36 100.0 39 .................................... CGAACCAGGCCCGCCAGGCTCGCGGTCTGCGCGCCCGGG 9061153 36 100.0 37 .................................... TCGAGTCCAAGATACCGCTTAATCCAGAGCTTGAGGT 9061080 36 100.0 37 .................................... TGCGGATGTAGCTGATCCATCTCAAAGCACAGATCAC 9061007 36 100.0 35 .................................... TCTCCGGGGTGATGCGTCCCTTGAGGAGTTCCGAG 9060936 36 100.0 39 .................................... TCGCAGCGGTGGCACACCAGGACGGAGGGCAGCAGGCGG 9060861 36 100.0 37 .................................... CGGCCCGGGACGTGACGGCGGACACCGTCTTCTCGGG 9060788 36 100.0 36 .................................... CTGCGCAAGAAGGGCGATTCGCGTGGCGAGGTGATT 9060716 36 100.0 36 .................................... TGGGAGCAGTGAAAGGAAGGTAAGGATCATGCACAA 9060644 36 100.0 35 .................................... TCCCCAGAGAACAACTTCTCCACTTCATCCAGGAG 9060573 36 100.0 37 .................................... GTTGGGTCCGTGCAGTCGCCGCAGACATCCAGCTTGG 9060500 36 100.0 37 .................................... TCTCCCTCGCATCCCGTATCGCCATCAGCACATCTCT 9060427 36 100.0 36 .................................... ATTCGCGGCACTGGCCAGCGGTCAGGCACGTAAGCC 9060355 36 100.0 33 .................................... ACGTCTGGGGCACCACCAAGGGCGCATTCCAGA 9060286 36 100.0 37 .................................... CGCACCGGCAAGTTTCACAAGGTGCTGGGGACCTCGG 9060213 36 97.2 34 ...........A........................ CTGAACACCCCCAAATCCTTGATGAGCTTCCCCA 9060143 36 100.0 39 .................................... CAGTCCCCACGCCCGTGGTGCGAGGATGGCCACGACTGG 9060068 36 100.0 36 .................................... CTCGCGCTCAGGATGATGATGGCGCCAATCAAGGTG 9059996 36 100.0 35 .................................... TTGAACGTTGTGTTGAGGTCCGTGGGGATGGTCGC 9059925 36 100.0 36 .................................... TCATCACCGGCTTGCCATCTTCACCCAGTGCGCCTG 9059853 36 100.0 35 .................................... CGGTTCACGCCGGACCGCCCGGCGAGCCACAGCAG 9059782 36 100.0 39 .................................... TTGGCCATCATCGGGCTCATCATCTACGCCGCCTGGAAG 9059707 36 100.0 36 .................................... CCCCTGAGTGCGCTCCGGAGCGTCCGGAAGAACTTC 9059635 36 100.0 36 .................................... CTGCGCAAGAAGGGCGATTCGCGTGGCGAGGTGATT 9059563 36 100.0 36 .................................... TGGGAGCAGTGAAAGGAAGGTAAGGATCATGCACAA 9059491 36 100.0 35 .................................... TCCCCAGAGAACAACTTCTCCACTTCATCCAGGAG 9059420 36 100.0 37 .................................... GTTGGGTCCGTGCAGTCGCCGCAGACATCCAGCTTGG 9059347 36 100.0 37 .................................... TCTCCCTCGCATCCCGTATCGCCATCAGCACATCTCT 9059274 36 100.0 36 .................................... ATTCGCGGCACTGGCCAGCGGTCAGGCACGTAAGCC 9059202 36 100.0 34 .................................... GCCTCGCGCTCCAGGTCTCGGGGCAGGAGGAGAT 9059132 36 100.0 37 .................................... TTAAAAACGTTTGCCTGATAGTCCTGCGAGGACTTCA 9059059 36 100.0 38 .................................... TTCGTGGGCGGCTCCGTCTCGCAGGGCTGGTCAATTCG 9058985 36 100.0 37 .................................... CGCACCACTTGCCCGGTGTCCTCGTCGCGCTCCGGAA 9058912 36 100.0 35 .................................... AGACAGCACCTCGCCGGGGTCGGCTGACCGGCTTG 9058841 36 100.0 34 .................................... TTGTAGCGCAAGTCGACAGCCGCCCGCCCCTGGG 9058771 36 100.0 38 .................................... TAGGAAGTCCGTGGCGGTGCGGATGCCGCTGGTGCCAG 9058697 36 100.0 34 .................................... CGAAGCGGGGTGACGTCATATCGCGACTTTGCCG 9058627 36 100.0 38 .................................... GTACTTACGTACTGGCTGGCCAGCTTGAGCATCAGCTT 9058553 36 88.9 33 ....T.....T.......T............G.... TCGAGCGTGTATTTGAACGGGATGTTGAAGATG 9058484 35 88.9 37 .G.T....T..........-................ TCCACACGAAAGTACAACGAAGACCATGCTTCCTCCC 9058412 36 97.2 37 .................................G.. ATTGCCGCTGCCTCCCCCTGAATGGGGAAGTTGATGG 9058339 36 100.0 34 .................................... TCGTAGCCCACGATTTGGACGTTGACGTTCGGAG 9058269 36 97.2 0 ........................T........... | C [9058264] ========== ====== ====== ====== ==================================== ======================================= ================== 44 36 99.3 36 GTCCCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC # Left flank : TTCTCCGTGCTCTGTGCCAGGGGGGCCTTCGTTGCACGCGCGCGGACCTGGGCGTCTTCACGCTGCGCGGTGAGCGCGCCGCGGGGGATGCGCTGCGCCTGATGGGCTGCGGCTCGTTCCTGCCGCCGCGGCCCGTGGCTCGGGGCGCCCCGCTTCGTGGGGAGCTCGCGAACGCCGCTTGAGCGGATTGTCGGCTGGGCAGGGGCCTTGCAGAACTCCGCCCGGCGGGGCGGCGCGGGGGAGTTGTGCGATGGATGGTATTCAAGCACCTCGCCGTGGCGGAGGCCCGCGCCCTCGAAGTGGACGATTTCCCCTGTTGTTTCGTGGGGTTGAGGCTCTTTGACAGGTGAATAGGTGCATGATTGATGAAAAGCTGAGTGATCTCAGGTGGTTCGGATTCCTGGGTAGGGTCCGGGAGCCACAACCTGAGTGAAAGCGGGGGAGGTGCTTGAAAAGGGGGGTGGTAAGTTGGCGGAACTGTTGGGAGATTCAGACGGGCT # Right flank : TTGGAGCGCGGAGAGCTCCCGCCATCGCCCGCGCCGGGCTGGCGGGGGCGCTTGCCGCTGGGCAGGTCGCGGAGAAGGCCTCAGCGATTGCCGTGCTGGAGCAGTTCGACTCCTGGGGCGACAAGTGAAGCTCGGCGCGCTCGTGCTGGCCCGGCTGGTGTCGCTTCCCGCGTCGGGCGCGGAGGTCATCGGCGTCGAGCGCGCTCAGCTCTTCCCGGATGGAGGTGCGACAGCCGTCGAGGTGGAGGGCAGCTGCTGGCTGTCGGAGAGCCGCTGCATTCGAACCGCAGCGGAGATTGAGCGGCTGCGCGCCGAGAATGAGTCGCTTCGCCAGCAGGCGGGGGACGTGTCCCTCACGGTCGCTGTCGTGGCCTTGCTTGTCGGGCTCGGGGCCGGGTTCACCGCTGCGAAGCTGGCGAACTGACAGTGGGCGGCTGCGGAATCGGCGCGGTTGGTCTGGGACCTCGCAACGCCATGAACTGCGTACTCACCGCAGTCGC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.30,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [20.0-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA //