Array 1 122298-122790 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAALYV010000002.1 Agrobacterium tumefaciens strain K599 K599_7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ================================================================================================== ================== 122298 33 97.0 34 A................................ GCTGCGGTTGATGGCGAGTGGAAAACGACAAAGC 122365 33 97.0 33 C................................ AGGCCATCACCGGATGGCTGGGCGCGCGTCTTG 122431 33 100.0 33 ................................. ATCCAGATCGCCTGTCTGCTGTTCGCCTAGGCG 122497 33 78.8 98 C.........AA.AT.......A....C..... TCCGCGCAGGTGCAGGATGTGGCAGGGGACCTAGTAAGTGCTCCATCAAGAAAGCAGGTTGAAACATGCCTTTGGCGCATACACGTATTCAGGAAACA 122628 33 75.8 33 A.C......A.....A.CAAT............ TGCACGTCTGAGTAAGTCAGCACATGCGCCCGT 122694 32 75.8 32 T.........CA.C...-....G.A.......G CGCGTTAGCGTCGTCAACAACGTCATCCAGAC 122758 32 75.8 0 .C.G........-.......GC...GC.A.... | T [122766] ========== ====== ====== ====== ================================= ================================================================================================== ================== 7 33 85.7 44 GGTCGCCTCCTTCGCGGAGGCGTGGATTGAAAC # Left flank : AACCCCTACAAGCAGGCCTATGAGCGCGGCGTGAAGTTGATCGGCGCAACGGCGCACTATGTCACCGCCGATCTCGACGAAGGCCCGATCATCGAACAGGACACAGTGCGCATCACCCACGCCCAGAGCGCCGACGACTATGTCTCACTCGGCCGTGACGTGGAAAGCCAGGTGCTGGCCCGCGCCATCCACGCCCACATCCACCACCGCACCTTCATCAACGGTAACCGCACCGTGGTCTTCCCGCCAAGCCCTGGAAGTTATGCTTCGGAACGGATGGGATAAGCCCCGAGACCAGCCAGAGAGCCCGTGATCAGGGATTTGGCGCGAACCACAAGCGTGTTATGGTTCCCCGGCCGGTTCGCACCGGCCGCTCTTTGAAATCGCAGCGATTTTTTTATAATCAGGACCTGCCAGCCCCGCAGGCTCTTCCCTCGCGCATCGCCGTTCGCGCAATCCGCGTTTTTTCCGCAGTCAATTCCGGGGCTTCAGACTCCGGC # Right flank : CAGGGCATAGGTCAATTGATGGGCCGCCTGAATATGTCGCCCCCGGGGCGAGGATTGAAACGCCGCAGCACCCGCCAAACAGGAAGGCACAAAGCCCCTCACCTCATCCCACCAAACACCACCCGCGCCCTCAACCCGCGCCCGCCCGCACCATCCTCCAGCGTCAGCCGCCCGCCGAACAGCCCGGCGATCTCCTCGATGATCGCAAGGCCGAGGCCGGCGCCGGGGGCGGCGTTGGCTGCGCCTCGGGCGAAGCGCTGGCGCACCATGGCGCGTTTTTCCGGTGGGATGCCGGGGCCGTTATCTTCCACTTCCAGCCAGACCGTGCCCGTCTCCCCGCCGACGCGCACGGTGACTTCCGCGCCGCGCCCGGCATAGTTGATGGCATTGGAAACGAGATTGCCGATCAGTTCGCCGATCAGGAGCGGTTCGGCAAGAATGGTCGCCTCACCCTCGCCTTCGAAACCAAGATCAATGCCGGCGTCGGCCGCGCGCGGCAC # Questionable array : NO Score: 5.39 # Score Detail : 1:0, 2:3, 3:3, 4:0.29, 5:-1.5, 6:0.25, 7:-0.99, 8:1, 9:0.34, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTCGCCTCCTTCGCGGAGGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CGTCGCCTCCCTCGCGGAGGCGTGGATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.10,-5.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-29] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //