Array 1 5594-4639 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_QKXJ01000111.1 Staphylococcus felis strain F1 k127_370, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
      5593	    36	  91.7	    29	...........G.......A...............T	ATAAGCATGTGACTAAGAAAAGAGGAATA 	
      5528	    36	  97.2	    29	.........................G..........	TCTCGTGATGGTGAGACCACTGTTTTGAG 	
      5463	    36	 100.0	    30	....................................	GATACTATGACTTTACTTTCAATTGAAAAC	
      5397	    36	 100.0	    29	....................................	TACCGATAAATCATTTCCAAAACCTTTGT 	
      5332	    36	 100.0	    30	....................................	CCCATTTCGAGGGCTTTATCACGTAACTGT	
      5266	    36	  97.2	    30	.........................G..........	AGCTAATGGACAGGTAACTAGTACGATAAA	
      5200	    36	  97.2	    30	............C.......................	ATATACAATATAGGCGGGAATATACCTACG	
      5134	    36	  97.2	    30	..............G.....................	GATTCAACACTAAACGCAAAGCGAAAGATA	
      5068	    36	  97.2	    30	..............G.....................	TAAGCTGTATGGCGAGGCGATTACATGCAA	
      5002	    36	 100.0	    30	....................................	TGTTTATCAACCCGTTAAAACGCCTATGGG	
      4936	    36	  91.7	    29	A...........C.............A.........	TTTAAAGACGGAGATAAACAATCAGGTCT 	
      4871	    36	  94.4	    30	......................A..G..........	ATCAGTATTAGATGAAATAGCAGAGGAGTT	
      4805	    36	  94.4	    29	........G................G..........	ATAAGCATGTGACTAAGAAAAGAGGAATA 	
      4740	    36	  94.4	    30	A........................T..........	CACTGCTGGGCAGTGTACTTGGTATGCATT	
      4674	    36	  88.9	     0	........G................T......T.C.	|                             	
==========	======	======	======	====================================	==============================	==================
        15	    36	  96.1	    30	GTTTTAGAACTATGATTATTTAGAAAGAAGTAAAAC	                              	       

# Left flank :   AAGTGAAATTAACAAAAGGAAATTATTTATCGATTTACTTAAAGACGATGATAAAGAAAATGTATTACTTATATTGTACCCAGAAGCATTTTTGGGGCTCAAAGATATTCAAAGATTTCTACAATTGATTAAAGGTTATCAACTCACAACCATTATAATTACAAATCATCCATCTATTATCATTGAGGAAGAAAATGTTTATTTATGCAAAAGCAATAAAGAGTGTCACTCAATCAAAGATATAAGGGAAGATCTAGAAATTCTTATGCCACAAGAAACAATTAATGACAAAACGGTTAGAATGATTGCTTATCATGAATTCATAGGTACAGATTTAAAAGAACTAGCACGATACTTTGAGTTTATTAATGATTACAATTAAGATATAATTGAATTTACTATGATAAATTAAAAACAACAAGCTTTATTCAATGTTTAACTTCTTAACTAAAAAGCTAAAACCTCAAAATGGTAAAAACTATAGTGTGTATTTTTGAATT
# Right flank :  ATTTTTTCTGAATTTTTAGATATAATGATGATACTAGAATGACCAATTGATAATCAATAATCGAGAAATCTTAATGATACATGTCTTTTCTTTTCATTGATATAATGAAATGATATAGTCAAATATTTTTTAGAGAAAATTGTTTTATTTTATTAAGAAAGGGGAAGTTCGATGAAGTCTATTATTGCAAAACACGCTTTTAAATTGTCAGATGGGAATTTATTTGAAAAAGTGACACGTGAAAAACCAATAGTGAATACTCATGAAGTAGGAATAGCTGTTCATGCATCAGGTGTGAATCCGATTGATACAAAGACGCGTCAAACACCACTTCAGACTGAAGCACGTGTATTAGGATATGAAGGGGCAGGTGTTGTTGAAGCAGTAGGTGAAGATGTGACACGTTTTAAAGTAGGGGATCGTGTGATGTTTGTCGGTGCACCTAAATGGGAAGGGTCGAATCAAACTTATCAAGTATTAGATGAAGCGTACATGACGCA

# Questionable array : NO	 Score: 5.47
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.41,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAACTATGATTATTTAGAAAGAAGTAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:77.78%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGCACTATGTTTATTTAGAAAGAAGTAAAAC with 95% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [0.00,-0.20] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [13-5] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [80.0-76.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,4.91   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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