Array 1 769-19 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKVQ01000199.1 Acinetobacter ursingii strain TUM15488 sequence199, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================== ================== 768 30 100.0 30 .............................. TGAGCCTGTGCTTCTGCAAGCTTGAATTTC 708 30 96.7 30 .............................A AAGCAGAACCTAGTTTTTTTCAGGGTGCAA 648 30 96.7 30 .............................G ATCAACTGGATTAATCAAAAGATTTTCGAT 588 30 100.0 30 .............................. GCTGCTCGTGAAAAGTATGAAGCCGAACAA 528 30 100.0 30 .............................. CCCCCTTGAGCGCTTGCTCTTTCTCTAATG 468 30 93.3 30 ............................CG CACGAATCAATGTGCCAGATAATCCCGTAA 408 30 93.3 30 ............................AG ATGATGTAACACCACTCATAGTTGAATACC 348 30 100.0 30 .............................. GTAAGCATTCGCCAGCTTTATGTCATAATT 288 30 93.3 30 ............................GA GCTGATCAATATCGTAATCTAAGGCAAGGA 228 30 96.7 30 ............................G. AACGCCGAAGCAGATGCGCCAGTGAATGGC 168 30 93.3 30 ............................AG TTAAATCCAGTTGTTAAGCTTTCATTCACG 108 30 93.3 30 ............................AC TTGGATGGTACGAGGGGGGAGTGTCCCAAG 48 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ============================== ================== 13 30 96.7 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : TAGAGCAACTGAATCTAACTCATTGGTTAGCAAGGCTGCAAGATTATGTACATATCTTATCTGCTCGTAAAGTTCCTGAGGATAAGATCAACGGCTATGCTACTTATTTTAAAGTTAATCCAAAATTGACGGTTGAGCAGCGTGTTGTTCATCAGGCAGAACGCCGTGGAATTTCAATTGAAGAAGCACAGGAACACTTTAAAGCATTGGATCTGATGGAGACCTTTGAACCTTATATCAATATGAAAAGTCAAACCAATGATATGAACTTCCGTTTGATTATTGGAAAAAAACGTGTTGATGAAGCAAATATTGGAAAATTTGGAAGCTATGGATTAAGTCGTACATCTACAGTACCTGAGTTTTAACCCAATATTTTTTACACTCTTTAACAGCTTAATAAAATCAATAAGTTATAACTTTGCTTTAAAACTTTGGGTATTTTATACTTTTTAGGGATAAAGCACTGTTATAACTTTATTTTTTGCTTTATTCTTACT # Right flank : TTATTCGCTAGTTTTTACT # Questionable array : NO Score: 5.72 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.62, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [25.0-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 2213-23 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKVQ01000265.1 Acinetobacter ursingii strain TUM15488 sequence265, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================== ================== 2212 30 93.3 30 ............................AG ACGCGATCAGAAATTCGATGATGTTTTTCC 2152 30 100.0 30 .............................. TCATTGATCAAAAAATCTCGGCATATTGAT 2092 30 93.3 30 ............................AC ATAAGTGGGCATGGAAATCAAAAACAGATT 2032 30 100.0 30 .............................. GAATCCGTTTGCTCTGGCAACAGATTCAGT 1972 30 93.3 30 ............................CG AAAAACCAAAAGCCACACGTGCACACTGAA 1912 30 96.7 30 ............................C. TATGCAGCAGATATTGAGCCACCGCTGAAA 1852 30 96.7 30 ............................A. CACGCCACCCTATCTCTTATTACAACCAAT 1792 30 93.3 30 ............................AG ATTTGGCAGTTGGTGACAATGCTGATCTTG 1732 30 100.0 30 .............................. CAAGAAAGTCATGATTGCCTTGGTTCTCTT 1672 30 96.7 30 ............................A. TGGTTCGTATCAAGTGGCACAACAAAATAT 1612 30 96.7 30 ............................A. TTGATTGAGGGTGGTTATTGGTCTGATCTG 1552 30 96.7 30 .............................C ACGCGGGAATCTTTCAATGCCTGTTTGTTC 1492 30 96.7 30 ............................A. ATAAAAATAAAAAGTCCGAAGATGAAATGA 1432 30 96.7 30 ............................C. CAGCAGGAGGATTATAAGCAGGATTTAAAC 1372 30 96.7 30 ............................G. GATCCTATGGTTTTTAAAGACGGAACAATG 1312 30 96.7 30 ............................G. TGTCATCGCGAGTGATGAATTCGCGGAAAG 1252 30 100.0 30 .............................. TCCAAGACCTAAGTGATATGACTTAACATA 1192 30 100.0 30 .............................. TGAAGTGTATGTGTTGAACATGCTAAGTAA 1132 30 93.3 30 ............................AG TTGCCGATGCAGCGCCACGGTTTCCAGTTG 1072 30 96.7 30 .............................A TTCCATCCACGCTTTGCAGGAATCACATCA 1012 30 96.7 30 .............................C AAGCTCAGTTGAGTAACCATCCCATTCATT 952 30 96.7 30 .............................G AACCCAAGCTAATCGTTGCGGTAATAGCAT 892 30 96.7 30 .............................G ATAGTGATTGCCTGGTTGCTCAGTCGGCAG 832 30 93.3 30 ............................GC AACCACATTAACGCAATCTTTGATGGGTTT 772 30 96.7 30 ............................A. ACTTCACAAGTAGCGGCTTCAAAGCCTCAA 712 30 100.0 30 .............................. AAATGGGGCGTTGTCATTTCTGGAGTAATG 652 30 93.3 30 ............................GC CCAAGAAAGCGATCGTATCAAGATACTTGC 592 30 93.3 30 ............................AG ACAGAACTGGCACTTCACCAAGCTGTCAAT 532 30 100.0 30 .............................. ACTACGGCCTTGCACCGCACGTGCACACAA 472 30 96.7 30 .............................C AACGCTTTTTCAAACGTATTCGCATAGCCA 412 30 96.7 30 ............................C. GAAAAATGAGAGATTGGAGGCTATACAATC 352 30 96.7 30 ............................A. GCTGATTTCAAACTGGACGATTGAGCAGCT 292 30 96.7 30 ............................G. ACCAAAATAAGCTAGGTGTGCTTACAGATG 232 30 93.3 30 ............................AG AATATTGCGCGTATATAAATGCATTGAGTG 172 30 100.0 30 .............................. ATAAGTCATTTATAAGGGGGATTAGATTAT 112 30 96.7 30 .............................A TGAATGGGCATAGTGATGATGGTTTTGAAA 52 30 96.7 0 .............................C | ========== ====== ====== ====== ============================== ============================== ================== 37 30 96.6 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : TTAGG # Right flank : CGGGGATATTTACCGCCCATAAC # Questionable array : NO Score: 5.37 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.28, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [20.0-6.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 12-1119 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKVQ01000318.1 Acinetobacter ursingii strain TUM15488 sequence318, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 12 28 96.4 32 ..........G................. TTTATCGATTTTGCTGCATCACTTAAATGTTG 72 28 96.4 32 ..........G................. TAAATGAGTTAAAAAGATGGAAACAATCGGTA 132 28 100.0 32 ............................ AGTGGCCTCATAAATGCTTGCGCCAGTAGCGT 192 28 100.0 32 ............................ TTTATGCGGAACGATATGATCGACCACCGTAG 252 28 100.0 32 ............................ AGTAATTAACGCTGGGCTAGATAATGTTTCAC 312 28 100.0 32 ............................ AATGGATCTAATTCAGCAAGCTCATCATTGTT 372 28 100.0 32 ............................ AGACGTAAAATATCGTCATGCAGTCGATTTCG 432 28 100.0 32 ............................ ATTAAGAGCATCGTCGCATAAGTATGGCGTGC 492 28 100.0 32 ............................ AGATGAAGAAGCAGACAATCAACAAGGTATTT 552 28 100.0 32 ............................ AAGTAAAGAAGTTGGAGAAAAATTGGTTGAAC 612 28 100.0 32 ............................ AGTTCGCATAGTTGGAGGCTGTAAGGTTGGTG 672 28 100.0 32 ............................ TCAATTAACTCCATGACTGCATAGGCACCAAT 732 28 100.0 32 ............................ TCCAACAGACGCGGAATCAACGACAAGTTTAT 792 28 100.0 32 ............................ TGTTTTGCTCAAATTGTCGAACCATTGCACAC 852 28 100.0 32 ............................ TTGCCTTGTCCACCTTTTGAATAAAGCAGATG 912 28 100.0 32 ............................ AGATAATAATATCCCTGAAGTTGAAGACTATA 972 28 100.0 32 ............................ AGGCTCTTTTAAAACGGCTTCTACAATTGAAC 1032 28 100.0 32 ............................ ACTATAACCAAGTGGTATAGGGAGGAAATGAT 1092 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 19 28 99.6 32 GTTCATGGCGACATACGCCATTTAGAAA # Left flank : GTTGTTGTAAGG # Right flank : ATACATGTGCTGTATTGTTAAATTGCTAAGAAGTTCATGG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGACATACGCCATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCATGGCGACATACGCCATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.70,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [11.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.64 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 153-6370 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKVQ01000168.1 Acinetobacter ursingii strain TUM15488 sequence168, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================ ================== 153 30 100.0 30 .............................. AAAAATCAGGTATGAGAAAAAAGATAATGT 213 30 96.7 30 .............................A TGCGATACGTAAGTTATGAGGATTGAAAGT 273 30 100.0 31 .............................. TTTATTGCAGTGATTAGCCTGCTTTTTTGAT 334 30 100.0 30 .............................. TTTATTGCAGTGATTAGCCTGCTTTTTTGA 394 30 100.0 30 .............................. TTAAATATTGGGTATCAAGATTAAATGGAA 454 30 96.7 30 ............................G. CAATTTTTGTTCCCTGTTGGTCATACGCTG 514 30 93.3 30 ............................AG AACCTGGCGTCGCAGATAAGAAGTTGATCA 574 30 96.7 30 ............................G. ATACGTTATGACCTTGCATGATCTTTGCAG 634 30 96.7 30 .............................A CTCATTCAGATTTAAGGATGACCGAGAAGC 694 30 96.7 30 ............................A. CCTGCACCATCCAATAATAATTGAACAGCA 754 30 96.7 30 ............................G. AATAAAGCTTAGATTTTTAATACTTTATGG 814 30 96.7 30 ............................A. ACGCATTGATTGTTCCCAACCAAAGATATT 874 30 96.7 30 .............................A ACTCCAATTTAACTGGGGGCAATATGTCAA 934 30 96.7 30 .............................G AGTAATGAACAGAAAATCATAGCCCTTATG 994 30 96.7 30 .............................A ATTTATCGCATAAGCGTTTTATGTTCTGTC 1054 30 96.7 30 .............................C ACGTGTACGGTCACGTGGTTGTAGTTCTGC 1114 30 100.0 31 .............................. AAACTGGGTGGTGCCTGATTTTCATTTAGAT 1175 30 93.3 30 ............................AC AGTGGAAGATGATCAAACACAAGACCAAGC 1235 30 93.3 30 ............................GC CTCAATTACTGCCATGCCTTGCTCATCAAG 1295 30 96.7 31 ............................G. GAAAGGGGGCTTGCCCACTTTCACTTTATTT 1356 30 100.0 30 .............................. TATAAAAACTTTGAAATCTATTGTCTGTTT 1416 30 96.7 30 ............................C. ATGCAGGCACGACAGAGGGGGGCATGAATT 1476 30 96.7 30 ............................G. TCAATGCAAAAGTAGACATGGAAATTGTGA 1536 30 96.7 30 .............................A CTTATGCCTGATCCTGAGAAAAAGGAACAG 1596 30 93.3 30 ............................AG AATCTCGCATTCTAGAAATAAAAGAATATC 1656 30 96.7 30 .............................A AAGAGAATGGGTTAGCCAATGGGTATTTAC 1716 30 100.0 30 .............................. GCAAGCATTATGATTGTTGGGGCGCATGAT 1776 30 93.3 30 ............................AA GAAGAGCAATTGAAAATCCAATCATGCATG 1836 30 96.7 30 ............................A. AGATGAAATTAAAAAGTATTTATGTATTTG 1896 30 96.7 30 ............................A. TGTAGAGTTCAGCATTGTGAATGTTGTTGT 1956 30 96.7 30 ............................G. ATGTCGTTCAGAGTAAAAACACCCTTCGTC 2016 30 96.7 30 ............................G. CTACCGCCTGATCCAGCTTTGCACCCCTGT 2076 30 93.3 30 ............................AC CTGAACTCAGTCAAACGCCGTTATCTACCA 2136 30 96.7 30 ............................A. AATGAACTCCATCGTATGGAAAGCCCTGAT 2196 30 100.0 30 .............................. AATCCCCGCGAAACGACAAATATCTAAACG 2256 30 93.3 31 ............................AG ATTCGCTAGAAGTAAACACAATATACTGGCT 2317 30 93.3 30 ............................AA ATATGACGGGGCATTACTCAGTTCATCTTT 2377 30 93.3 30 ............................AA TAGTAAACAAATGTATTGCTATCAAGAGAA 2437 30 100.0 30 .............................. GTTCTTTTTTTGTTTAACTTCGCAGAAGTG 2497 30 100.0 30 .............................. TACGATCAACAACTGGATCAGCCAATTGAA 2557 30 96.7 30 ............................A. TGATCAATGACCATTGACCATTTTCAGGTT 2617 30 93.3 30 ............................GC ATCTGCTGCGGTTGAGTCGTACAAATCAGC 2677 30 100.0 30 .............................. TGACATACTCACCACGTCTTACAATCAGCA 2737 30 93.3 30 ............................AA ACCAATTCGCGCTGAAATGGATATAGCTTA 2797 30 96.7 30 .............................G AATAGCTCGGTTTAATTCTGGTGTTGAGCC 2857 30 93.3 30 ............................GA AGCGACCAGTGTTGCAGCAATGTATTTAGT 2917 30 100.0 30 .............................. CACTCACTGTCTTATTGAATTTCTGGCGAA 2977 30 100.0 30 .............................. TAAATCAGCCAAATAGTTTTGAATCGTGTT 3037 30 96.7 30 .............................G AGTTTTCATAGGCAGTTGCAGCATCATTCA 3097 30 100.0 30 .............................. TGATGTGGTTGCTTGGTTACTCGGGTGAAA 3157 30 96.7 30 ............................A. AGGCATTGGCTTCTTCGATTGCGTGTTTTA 3217 30 93.3 30 ............................AA ATGTCCCCTGCGGATAGTCACGTAGAAACG 3277 30 96.7 30 ............................A. CAAATCGTTTTTGGCCACATCAAAGATCAA 3337 30 93.3 30 ............................AC TTATCGTACATATTCAAGAAGACAGTAAAG 3397 30 93.3 30 ............................GA TACGTGTGATGGTTTATATCGCGCAGACGA 3457 30 100.0 30 .............................. GTGCGAGTGCGCTGCCTGCTTGGGCTTGAC 3517 30 96.7 30 ............................A. CATAAGGCACACCCGCATGCAAGGCTTGGT 3577 30 93.3 30 ............................AA TCGAACAACAAGTTATCAATATTGTTCGCA 3637 30 96.7 30 .............................A TCAATCAGGTATTGTTAATATAGGATTAAT 3697 30 93.3 30 ............................AA TCTTTTTCTTTTCCGCACTTGCTGCACTTT 3757 30 93.3 30 ............................GA TTCGCATGTAACCAAATCCACTAATGCAAA 3817 30 93.3 30 ............................AA GAACAAAGACTTTTTAGGGGTCTGTGAGGA 3877 30 93.3 31 ............................GA TGTTTTTTAGCGCATCTGCAAAGCTGAATTT 3938 30 93.3 30 ............................AA CCAAAGTTTATTAGTATCATTTTACACCTC 3998 30 93.3 30 ............................AC AAAGACGATCATTCACGTATACAGATAGAC 4058 30 100.0 30 .............................. TGAATGATGTTTCAATCTATGCTTTGTTAC 4118 30 96.7 30 ............................A. ATGGCTAAGTGTACTGGGTGATGTATGAAG 4178 30 93.3 30 ............................GA GAAACATAATTGCGGTTGATCCAGAAAAGC 4238 30 96.7 30 .............................A ATAAGCCAATTGGTGGCTGATATGACTGAG 4298 30 93.3 30 ............................AA TATCAAGCATCAATACGGTAAATACATCAA 4358 30 96.7 30 ............................A. TAGTTGGATCAAGCGGAATTTCACAATACA 4418 30 100.0 30 .............................. CATTTCTTTTAATCGTGCCAAATGTTCATC 4478 30 100.0 30 .............................. TTTATATAAAAACAATTTTTCTGTTGAACA 4538 30 96.7 30 ............................A. ATTTTGTCATCACAAAGACGGCCATCTTTT 4598 30 96.7 30 ............................A. TAAGAAATGGCAATAATGATGCTGCACTGG 4658 30 100.0 30 .............................. ATGTTGAAGGCATTATCGCTGTTGATCAAA 4718 30 100.0 30 .............................. TAAATTTTAACACACATACAGAAGCGGTCA 4778 30 93.3 30 ............................AA TAAAGACAAGATCATCTACAGATGATTTAG 4838 30 100.0 30 .............................. TAAATGATGTGTCGATCTATGCCTTACTAC 4898 30 93.3 30 ............................AA GAGATTTGCAACGTGAGGCAGGCAAATCAT 4958 30 100.0 30 .............................. CTGAAACTTCTATCCAAGAAATATTTGTAC 5018 30 96.7 30 .............................G CATTTTCAAAAGATGATTTGCTCAAAACTT 5078 30 93.3 30 ............................AG AACCATTTCCGTTGCCGGAACCATTACTTG 5138 30 96.7 30 ............................A. ATGCTTGGTATGTTCATGGAAGCATTTCCA 5198 30 93.3 31 ............................CG AACGACGCTTAATAGAGCGGGGCACACTACT 5259 30 100.0 30 .............................. TGATAACTAAGGGTTTTTCTTTGGAACTGG 5319 30 96.7 30 ............................G. ACAAGAGACTCGCAGCGTATTTTTTAAAAA 5379 30 93.3 30 ............................AA GAAGATGCAAAACGTCGTTTTATTCGCGAA 5439 30 96.7 30 .............................G TAGGAAGTTTGAAATGTGGTTCTGTGCCTA 5499 30 100.0 30 .............................. ACCGTATTTAAGGAATAAATCATGCCTGAA 5559 30 93.3 30 ............................AG AAGTTTTATGAGACTTGAGGCTAATACTTC 5619 30 93.3 30 ............................AA CCAACACTAGTATCGTCATAATCATGATTA 5679 30 93.3 30 ............................AG TGAAACCAGCCCACTACGCATTTCTTCACG 5739 30 96.7 30 ............................C. AATATTTTTTCTATAATTAAATTTTAAGTT 5799 30 93.3 30 ............................AG AATCGTCTAGCAATTGACAATCGGTTGGCG 5859 30 100.0 30 .............................. GCTTTTTACATATTTGTAAACTAGATTTCT 5919 30 93.3 30 ............................AA TTTGAAATAACTGTCGGATCTATTTCTAGT 5979 30 93.3 30 ............................AA AGTCATCCCCTGCTGATCAAAAACCAACAG 6039 30 96.7 30 .............................A AGAAAAACCCTTAGTTATCAAAAGCTTATA 6099 30 93.3 30 ............................AG TCTTCACGATCTATCCCGATCGGTTCAATT 6159 30 93.3 30 ............................AG AATCGCTTTTACCCACAGAACGCAGATTAT 6219 30 93.3 30 ............................GA TCAACTCAACAGAAACATTATCAGGATGCA 6279 30 93.3 32 ............................CA TGACCACAAATTCTTTTTACAACTTTTACTTT 6341 30 96.7 0 .............................A | ========== ====== ====== ====== ============================== ================================ ================== 104 30 96.2 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : CAACTTTGCTTTTAAATTCAGCATTATGACGTTTACGAACTTTTGTCATTAGATAGACCTCTTTTCTTAAGGGCTATTCTATCTTATTTGCTACGAATTTTTGGTCTAGTTTTCGGGGAGTATTATAGTTGCTTATGATCCTTCCGATCCATG # Right flank : TCCATTAAAAATTAAGCCCC # Questionable array : NO Score: 5.36 # Score Detail : 1:0, 2:3, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.29, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [61.7-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 22-1131 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKVQ01000320.1 Acinetobacter ursingii strain TUM15488 sequence320, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================== ================== 22 30 100.0 30 .............................. TTTTAATAACAACAAGATTACTGTTTGGAC 82 30 100.0 30 .............................. CTGGAAACCGCCTAACGTGTCTTGGAGATC 142 30 93.3 30 ............................TA ATTGTAGTGATTTTGAATTTTGTGATTAAT 202 30 100.0 30 .............................. AAATATCTATGGCTTCATAACCAATATCAT 262 30 96.7 30 ............................T. TTTAACTAAAAACTTAATCTCTTTCGTTTT 322 30 93.3 30 ............................GA TCTTCTGATTACTTGACTTGTTGTTGTAAG 382 30 93.3 30 ............................TA TCCATTAAAAATTAAGCCCCTTATAGGGGC 442 30 96.7 30 .............................A AAAGGAGATTGATAAATAGAACCTTCAATC 502 30 96.7 30 .............................A TGATATTGAAAAATGAATTTTAACTATTGT 562 30 96.7 30 ............................T. TTTTATCTTCAATAACCGCCAAAGCCGTAT 622 30 96.7 30 ............................T. TGGCTTATCGCTGGTCATCAAGAATGATTT 682 30 93.3 30 ............................TG TAGTTGTTGTTGTTGTATTACCATTTGAAT 742 30 96.7 30 ............................T. TTCGCGGTTATTTTTTGCTATCGCAAAGTA 802 30 96.7 30 ............................G. GTACCGATTTTTCGAGTCGGCGACATCGGC 862 30 100.0 30 .............................. GTTTGACTTGCTCATTCATTTTCTATCTCG 922 30 100.0 30 .............................. TCACAGTGCCCGTAGCGTCACCAGAAATTG 982 30 96.7 30 .............................G TCATAGAATGGCTTTGTTTTTAATCTATGG 1042 30 100.0 30 .............................. TTTTAATAACAACAAGATTACTGTTTGGAC 1102 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ============================== ================== 19 30 97.2 30 GTTCATGGCGGCATACGCCATTTAGAAAAT # Left flank : GGCTTTGTTTTTAATCTATGGG # Right flank : CTGGAAACCGCCTAAC # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.55, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [23.3-15.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 1126-136 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKVQ01000321.1 Acinetobacter ursingii strain TUM15488 sequence321, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================== ================== 1125 30 96.7 30 .............................A TGAATGGGCATAGTGATGATGGTTTTGAAA 1065 30 100.0 30 .............................. GGGGATATTTACCGCCCATAACTTTTCCAT 1005 30 96.7 30 .............................G TTTATGGCAAGCGTTGGTTTATTGATAATG 945 30 93.3 30 ............................AA CTCAAAAAACAACTCTTGAGCTTCCCGACT 885 30 93.3 30 ............................AA CTTTGTGAAATAGGATCTCGATTTCTAAAG 825 30 96.7 30 .............................T TACCTGCCCCGCAAGTTTGTTAACTTGGTA 765 30 96.7 30 ............................A. CTAGTCCAGAGAGATGGAAAGAACGTAGTC 705 30 93.3 30 ............................AG GTTGTTCTGTGGGCAGGAAGTCGCAAGACA 645 30 96.7 30 .............................G TGTGAATGCCGCTCTAGTTGTTCTCAGCAA 585 30 96.7 30 ............................A. ACAGCCAAAGGCATGTAGCTTTTTGTTCTG 525 30 96.7 30 .............................T ATACCGTGCGTATTGGGCCACGGAAAGTAA 465 30 100.0 30 .............................. ACACAGACGATATTGTTAATAACTTTCCAA 405 30 93.3 30 ............................GT TCATTGTTGTTGACGTTTCAATCGGCAGAT 345 30 93.3 30 ............................AT TAACTTGACCTATGCGTTTAAAATTAGCAC 285 30 100.0 30 .............................. ACACAGACGATATTGTTAATAACTTTCCAA 225 30 96.7 30 .............................G ATACAGATCAGCCCGACATTGACGATCAAG 165 30 96.7 0 .............................A | ========== ====== ====== ====== ============================== ============================== ================== 17 30 96.3 30 GTTCATGGCGGCATACGCCATTTAGAAATC # Left flank : GGATTAGATTA # Right flank : AGTGAAGTTGAAGGTACTCCCCAATGTCTAGACCAAATAATCACGAAATTAAGATAGAATTGGGTTGATAAAGCACAGTATTAACCGAACTATTGTTTAAATAAACCTGTGCAGGGGTATGGTAATCAAGCGACTG # Questionable array : NO Score: 5.34 # Score Detail : 1:0, 2:3, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.27, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [65.0-15.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 22620-20009 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKVQ01000039.1 Acinetobacter ursingii strain TUM15488 sequence039, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 22619 28 100.0 32 ............................ AATAACTTAAAGCATCTGGTAATTTCATTGAT 22559 28 100.0 32 ............................ TAATCTCTTGCTCAGTTATCATTCAACCTCCC 22499 28 100.0 32 ............................ TTATATTTTCTCTCGACAATAAAAGGAAATAA 22439 28 100.0 33 ............................ ATACCACTCAAAATCATATCCACCTTTTTCAAT 22378 28 100.0 32 ............................ AGATATTAATCACGAAAGGTCAGGGTTTAGAA 22318 28 100.0 32 ............................ TGTACCAGAACCGTCACCATTGCCATCCCCTG 22258 28 100.0 32 ............................ ACGTTAAGACAAATTCAGGAATTTGTAATCAA 22198 28 100.0 32 ............................ TTTTTCTGAGCAGTTCGTATGCTGCGATCAGG 22138 28 100.0 32 ............................ AAATTATTGCAAGGTCATAATGTTTTTGCAGA 22078 28 100.0 32 ............................ CAGTCTTGTTACCGCCATTAAGTTACACCGAA 22018 28 100.0 32 ............................ AGTGCATCTGCTCATACGTCAGTACAGTTCAA 21958 28 100.0 32 ............................ TAACGCCTATAATAATTATTGGTCACTGTTAG 21898 28 100.0 33 ............................ CAAAAATTTGAGGAGTAGCTACTCATGGCACGT 21837 28 100.0 32 ............................ ATATTGGTCATTAATACGATCGACAATTTCGT 21777 28 100.0 33 ............................ ATTTCACGGCAAATAGGGGCGTAGTTCTTCAAT 21716 28 100.0 32 ............................ AATAGAAGCTGGACAGGTGTTTAATGCTTGCA 21656 28 100.0 32 ............................ AAAAAGAGGCTAATTGTTAGCCTCTTCAGAAA 21596 28 100.0 32 ............................ ATTTAGCATCCCTAATGGCAGGGCAATATATT 21536 28 100.0 32 ............................ AATCGTCACGAAATAATACAATCTGATATTTT 21476 28 96.4 32 .......A.................... ACATCATCCAGTGTAGCCAGTTGTTTCTCGTA 21416 28 100.0 32 ............................ ATACTCAGGTGCTTGGCAGAAAAACGATGAAT 21356 28 100.0 32 ............................ ACTAATGCGACGAAATATAACGTTACGCCATA 21296 28 100.0 32 ............................ ATGCGCGACTACACCATTGCCGCGTTCTCTGT 21236 28 100.0 32 ............................ AGTCGAAAAAATCAGAAACTTTTTCAAAAAAA 21176 28 100.0 32 ............................ TAGACCCTAGCCCCTACGGGGGCTAACTTATT 21116 28 100.0 32 ............................ TTTTTATCAGCTTCAGAGATCACGTAGTAAGA 21056 28 100.0 32 ............................ AATAATTCGTGGTGTAACTCCTAGAGAGGCTT 20996 28 100.0 32 ............................ ATGAAAGTGGCATCTTTGTTGTGTACTAAGTA 20936 28 100.0 32 ............................ ACTTCTAAGTACAACTAAAACACCGTAATTAT 20876 28 100.0 32 ............................ TTTATTGTGCGTTTAGATGTGCTGTCATAGAT 20816 28 100.0 32 ............................ TAACACGATTCATTACATGGAGCGTAACCACA 20756 28 100.0 32 ............................ TTTCAAGCTTCGCTTATGGGCATTCCGAGTGA 20696 28 100.0 32 ............................ ATTCTCAACGTCCTCGGCGTATTCGTTTTCGT 20636 28 96.4 32 ..........G................. GAACACGCTGAAAAGCCATGGATCCGCGACAT 20576 28 96.4 32 ..........G................. TGACGATTCTCTTTTTGCTGCTCATTTTGAAT 20516 28 96.4 32 ..........G................. TATACCAACATTTTGAAGATCAACATATTCAG 20456 28 96.4 32 ..........G................. GAAAGCAATGGATAGAATAATTCGTAATTCGT 20396 28 96.4 32 ..........G................. ATTTGGCAATGTTACAGATGAGTTCTGCAAAA 20336 28 96.4 32 ..........G................. AACATACCCAAAAAGTCTTTGATCTTATTGAT 20276 28 96.4 32 ..........G................. AGCAAGCAATAGTGAGCCAACCTTATCTGTTA 20216 28 96.4 32 ..........G................. TATCCCCAAACGAAAGCAAATTCATGCGTATG 20156 28 96.4 32 ..........G................. TTTAAGCTGCTGAATCGCCCACATCTTATTGC 20096 28 96.4 32 ..................T......... GATCCAGAAGGGGTACAACCGATTAAGCCTTT 20036 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 44 28 99.1 32 GTTCATGGCGACATACGCCATTTAGAAA # Left flank : TTAAATGAATATTGAAGAATA # Right flank : TGCAAACGATGTGTAAAAGTTTAAGCGGATTGATTCACGAGACTAGAGTATGGAATCTAGCCGATCATAAAAATGAGTTAAAAAGGAATGATATAAACAAAAACGCACTGCTTCTGGCGAAACAGTGCGTTAAGTTAATAAGATTATGCTGGTAAATCGAACCAGATCATTTCACTATCTTCAAGTGCATGAATCGTAGTTTTCTCATCAAACAATAAAGCATCACCTGCTTTAACAATTTGATTCTCAATCATAATTTGACCTTTAATCACATGCACATAATTGTGCTTTTGAGTTGCAGCAATCTCAAGTGTTTTACCAGCTTCTAACACAGCCGCTTTCACTTCTGCATTTTGGCGAATATGCATAGCAGCATTATCATTTGGTCCTGCAATCAAGTGCCATTGGTTTGGCTGTTCACTCGGATCAAGTTTGATTTGTTGATACGTTGGTTCAGCATCGCGTACATTTGGATGAATCCAGATTTGAAATAGATGCAC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGACATACGCCATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCATGGCGACATACGCCATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.20,-6.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.91 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 14070-13035 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKVQ01000053.1 Acinetobacter ursingii strain TUM15488 sequence053, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== =================================== ================== 14069 26 100.0 35 .......................... ATCTACAGCAGCACCTAAATCCTTTGTTGCATTGC 14008 26 100.0 34 .......................... ATCACAAAAGCAAAGAATTGATGCGAGATGATGC 13948 26 100.0 34 .......................... TTTTTCCAAAGGAAAGCTGTTGATCCGCAATGGC 13888 26 100.0 34 .......................... TGAGTATTACGAAAGCCTAGAAATGCAAGGAGGC 13828 26 100.0 34 .......................... AATTCCAGCAATCGGAGCAGCCAAACCTTGAAGC 13768 26 100.0 34 .......................... AGTTTGACCGCCATTAAAATATTCATGAATCCGC 13708 26 100.0 34 .......................... ATGTATCTGGCACATGCCGTATCGAATAGTTCGC 13648 26 100.0 34 .......................... TGTGGAGTATCCCTCTGATATTGCAAAATGTTGC 13588 26 100.0 34 .......................... AGAACGTCTCAGTCATTGAAGATCATCAACACGC 13528 26 100.0 34 .......................... TTTTGATTGGCGTGATCTGCCAAATGGTTCTGGC 13468 26 100.0 34 .......................... TTCTGGAATCAGCAAAAGCTTTCCACCTTCAGGC 13408 26 100.0 34 .......................... ACACTGTTCTGGATTTTCTTCACACTTAGAAGGC 13348 26 100.0 22 .......................... AAGAAGAATGGGATGCGGCTGT Deletion [13301] 13300 26 100.0 34 .......................... TGAAAATAGCGATTGGCGTGATACGCCTGACGGT 13240 26 100.0 34 .......................... AAAGTATCGATCGCATTGCTAATTCAGAACGTGT 13180 26 92.3 34 .............A....T....... GCAACGAACAGTTAGAGAGCAAATGCTCACGGGC 13120 26 92.3 34 ..................T......G ATTGGAAATGGACAAGTTTCAAAAGTGGCGCGAT 13060 26 76.9 0 .................AT...TTTT | ========== ====== ====== ====== ========================== =================================== ================== 18 26 97.9 33 TTCCTATCGCATAGATAGCTTAGAAA # Left flank : TAAAAATTCAGCTTTTTCGCTTGGTAAAAGTTTTGCATCCAAAATCTCGGCATCTGCGGCCCATTCTAGAGAAAGCGTTTGTAAAACTAGCGCAGAGCTTTCTGCAAAATAATCTTCGGTTCCCTGACCTAAATGAGCATCGTATTGACGTAATGCAGTCACTCCAAAACGAATAAAATCACGAATTGTTGTTAAGTTTTCTGCGGCTTCCTGTAATTGTTCAGGATTAATGGTCGGTCGCTCCACTCAGGGGTCTCCAAAAGATGATGATGCAAAACGGCTTATGATACCTTGTTTTGTCTTGCTTTTTAATGCCTAAAACGAGTGGATTCAATTTTAAATCAAGTTGACTTATTGCTCTTTTTAAATCAATATTTTTCTTACTCTTTAATAATATAATAAAATCATACGCTTATGATTTAACTTATTTTTAAAGCATAATATCAAATTATTAAACTAACTCATTGTTATTAAATGATTTATTAATAAGAGTTTATAGC # Right flank : CGAGACTCCAAACATTTTGTTTTTAATTGCTGCATCGCTAAAGGATCCATCGGTGCAGTCATCATGGCCCGATAAGCCAAACATTCCTGCGTTTCACCTGTTGCTTGAGATTTGGCATTCAAGCTATGACATCCCATCAGTCCCAAAGAGAAAATACATCCTAGAATAAATTTGATGAACATTGGATTTTCTATAACTTAGTATTTGCCGATATCAACTCAAATTTTAAAACGCAAAACAGCAAATAGAAACCTTTGAATAGACTTGTTTCATAAAGTCCTTTCATTTTGCCTATGGGAGAAAAATAAAGAGGGTTTAAACAATGATGAAAGACGTCATAGTGTATAGATCTTTTAAAATTCGCTTATTTTCTTAAAATCTTCTGCCAATATATAAGCATTTTAAAAAGATGAGCTTAATACAATGACAAATCCAGATATTCAAAAGGTAGAACTCGCAAAAGCCTATCGTTTACTTAATCATGGCCCTACTGTACTGGT # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:-0.03, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCCTATCGCATAGATAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: R [matched TTCCTATCGCATAGATAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.70,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-86.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //