Array 1 1112042-1109695 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT960777.1 Latilactobacillus sakei strain FLEC01 chromosome 1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 1112041 36 97.2 30 ............................G....... TCAGCCAATGCGTCATAATCAGCTTGCGAG 1111975 36 97.2 30 ............................G....... TATCCAAGCGATAGTGTACTATTACTTATA 1111909 36 97.2 30 ............................G....... TTGGCCAAGCATTGAAGCCGTTAAAAGCTA 1111843 36 94.4 30 ............................G.C..... TGGGGTCTAATCCATCGTAAGCTTCTTTTA 1111777 36 97.2 30 ............................G....... GTGCCAATAAGGATCTTGCACGCAAAAGGA 1111711 36 97.2 30 ............................G....... TTGGTTGAGTTTTTAGAGGCTTATGAGCAC 1111645 36 97.2 30 ............................G....... ATGCTCACATGTTGGAAGAAGAACGTATAT 1111579 36 97.2 30 ............................G....... TTAAACGTATTATTGGTATACCACCGCATC 1111513 36 97.2 30 ............................G....... TTCTTTGGTGGAAAAGATAAATGATTTGGC 1111447 36 97.2 30 ............................G....... TTACGTCGACCTTTTTAGCAACTTCTTCTT 1111381 36 97.2 31 ............................G....... AACGGCAATTGGTACGCCTACGACAAAGAAT 1111314 36 97.2 30 ............................G....... AGCGCAACAACAACGCTGATAAGCACGATT 1111248 36 97.2 30 ............................G....... TGTTAGACCGGTTTGGCGGGTATTATCGTA 1111182 36 97.2 30 ............................G....... TTACTTCGTTTGTAGACTATAATGAGCTTT 1111116 36 97.2 30 ............................G....... ACAAACATTTGTTTAATTGGATTGTCATAA 1111050 36 97.2 30 ............................G....... TAACAATGGCATTTTTAACAACAGATTATA 1110984 36 100.0 30 .................................... TGAATACTACGGGTAACCGTTTAAAGACGT 1110918 36 100.0 30 .................................... TGTGCTTCAACCTTGTCCAGGCGGTGCTTA 1110852 36 100.0 30 .................................... AATCTAACGTTTGACTTGGCATTACAGTAA 1110786 36 100.0 30 .................................... TGGTGTTATCGGTGTAAGTCCAAATTGTCC 1110720 36 100.0 30 .................................... ACGCGCAATAATAGACACACTTTCGCGCTA 1110654 36 100.0 30 .................................... TTTAATATCTTTGTTAAAATCTCGATAATG 1110588 36 100.0 30 .................................... ACAAACCATTGTTAACCACTGCCGTTTTAG 1110522 36 100.0 30 .................................... TTTTATCATCCCAAATTAAACTATTCCATT 1110456 36 100.0 30 .................................... AAGGCCTATAAGTCTAGCGAACGCAACTAT 1110390 36 100.0 30 .................................... CAATTGTCGAATATGATAATAAACTGCACG 1110324 36 100.0 30 .................................... AAGAAGTTATTACAATCTGGGACAACGACA 1110258 36 100.0 30 .................................... AGAATACTATTTCACGCCTTAAAGGATTGG 1110192 36 100.0 30 .................................... GCTAATTTATTGGCAGATTCTAGATCAGTA 1110126 36 100.0 30 .................................... ATTAAATGGGATTTTTTAAACCGGTGAACA 1110060 36 100.0 30 .................................... GTTTACAGAATAACGCTGGTTACAAGGTTA 1109994 36 100.0 30 .................................... CCTACTATCATTTAACTGGCGACGTTGGGT 1109928 36 100.0 30 .................................... TGAACAGTTTGATGGGTCAGTTAGGATGAT 1109862 36 100.0 30 .................................... TGTTCAGGATTAATCTCGCCGCCTTTCGCA 1109796 36 97.2 30 ..........................T......... ACGGTTCAAGAAGATTTTACAAAGTGGTTT 1109730 36 91.7 0 ...........................C.....G.T | ========== ====== ====== ====== ==================================== =============================== ================== 36 36 98.4 30 GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC # Left flank : GCGGTTGATTTAAATCATCTTTTTCAAAATAAGTTGATCAAAAAATTTACAGCCGATCTAACGGATGAACAACGACAAAAGGTAGTTAATCTGAATAATGAATTACGAGCCACTATTTTAGAAGCCGCGTTTATGTATGAATTAGCTTTAGATATTGACCATGAGTTAGATTTGCAAAAGTTAATTAAATTTTGCAATTTAAAATTTTCGAATGATGTTCAAGATGATCCATATGGTATAATAGAAAGCATAGTACAAACTGCTATAGAGTTACAAGAAACAAGAATTATCACGTTGATCAACGTTTCGCACTATCTTAGTATCAACCAGTTTAATGAACTGGTAAGACTAGTTGCGACATTGGATGTGAAACTCTTTATCATTGAATTTTCAGAATTGGCAACGCCTGACAGGTACCAAGAATGCTGTTATTATCACATTGATAATGATTATGTTGAATGGCGTTACGAATAAAGTGAGTATTTGATGAAAAAACATCG # Right flank : CACGCTAATAATCGTAAATTCTTTTAATTTAAGTTTGGGGAGTACCTTTAAAGGGGTACTCTTTTTTATTAGATTTAATGCATATCCTTGATTGATATTTCACGATTCGACTATTGAAAAGCGTTCTCATTTAGCTTAGAATTAAGTCAGCAACAACGTGCTATAATGCGATTTTTGGAGGGTCAGTAATGTCTAAATTAGAAATTATCGATTTACACGTCGGAATTGACGGTAAAGAAATTTTAAAAGGTGTTAACTTAGAAATGAATACGGGTGAGATTCACGCCATCATGGGACCAAATGGGACCGGGAAATCAACCCTTTCAGAAACCATCATGGGTAATCCTAAATACGAAGTGCTTCAAGGTGAAATTAAATTAGACGGTCAAAATATTCTTGAAATGCCAGTTGATGAACGGGCGCGCGCTGGCTTGTTCTTAGCGATGCAATATCCATCTGAAATTCAAGGGGTTACAAACGCTGAATTTATGCGGGCTGCT # Questionable array : NO Score: 2.93 # Score Detail : 1:0, 2:0, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.75, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC # Alternate repeat : GTTTTAGAAGAGTATCAAATCAATGAGTGGTTCAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //