Array 1 1983888-1982663 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP018176.1 Liquorilactobacillus hordei strain TMW 1.1822 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 1983887 36 100.0 30 .................................... AATAGGCTTTGTCTTAATTGTACTAAAGAT 1983821 36 100.0 30 .................................... TTTTACCAAGAACTTTTTGACCAGCTTCTT 1983755 36 100.0 30 .................................... AAGAACGTGGAACTAAACAGTATGAACTTG 1983689 36 100.0 30 .................................... TTAATTGTTTGATAAACTCGTTTCCACCGA 1983623 36 100.0 30 .................................... GACATATTACATGTATCTATGTTGCAAGCA 1983557 36 100.0 30 .................................... AATTAACACCATCATCATTTACTCGAACAG 1983491 36 100.0 30 .................................... CAGACTTCTTACCTTTTTTACCAACGAATC 1983425 36 100.0 31 .................................... CAATCACGTATGAAGAATTTATCAGCGACGA 1983358 36 100.0 30 .................................... AGCAATGCTTGTAACTTCTGTAATTGGTTT 1983292 36 100.0 30 .................................... CTAAGAAAGGAAGCTATCCCACTGTTGCTA 1983226 36 100.0 30 .................................... TAAAAGCAAAATTAGCAACAATGGGAAGTT 1983160 36 100.0 30 .................................... GATCCGACTAGCCAGTGCCAATATTCCTGG 1983094 36 100.0 30 .................................... TCCCAGGGTGTCCCAACTTTGGCCCATCAA 1983028 36 100.0 30 .................................... TCCCTCCATAGGTGCTTTAACGAAGTATTT 1982962 36 97.2 30 ....................C............... GGAACTATGAATAGTTCAGATACCTTAGTG 1982896 36 100.0 30 .................................... TTGCTACCATGAGTGCCATTGCCATTGTTT 1982830 36 100.0 30 .................................... AGTGCAACAGTTACACAATTAGCTAATACT 1982764 36 100.0 30 .................................... ATCTTTGGCCGTTAAAACAGATGAACTTGA 1982698 36 97.2 0 .............................A...... | ========== ====== ====== ====== ==================================== =============================== ================== 19 36 99.7 30 GTTTTTGTACTCTCAACATTTTCCTATCAGTAAAAC # Left flank : TTAGCAAGTTTTTTAACAGCTGAAAAGATTCAAGTGTTGATAGATGGGCTAGTACAGTTGGCAGAAAAAACAGGGTTAGTTCATATCTTTGTAATCAGTCAGATACCATTAGGAATAAATTATCGTCCAAACGATATTCCAAATACGATTATTTTGGCGGATGAATTGTGCCAGATGCCTAATTTTGATAGCTTTAGAAATAGTATTGAAAATCATTATCCAGGAGATTTGAATATGACTGATGATCAGCTTTGTCAAAATTTTTATGAAATAGTCGCAGACATTGGTGATAATAATATTCTTACTGGAAAATCTTATCAAGATATTGTACTGTTAAAAGTGTTAGATGAAATTTTAGGATTCAAGGTAACTAATTTTACTTACAACCTTAAAGAGCTTACAAATGCAGAACGTGCCTATCTTGATTCTTGAAGATTGACGAATTTTTAGGAATAGAAGACACAGTTTATATGCTAAAAAGTAATAATTTTTAATTTGAG # Right flank : TTAATTAAATAAAATGTTTAAAAAGTAGTAATAAAAGCGATTTCATATATAATGTAAGTGAGAATCGCTTTTTTGTTTTGAATAGGGGTGATTATATGGAGAACCAACAATTATGGAAACAATTTATTTCAGGAAACATGATTGCAGCGGATACTTTGGATACCAAAATAGCAGAATCATGGAAGTTTTGTTCACGAGCAGAAGTTGATCCATACCTCACAAAACCGCAGAAGATTCTGTCAACAGCAGAATTGCTTGATAAGCAGCAACAATACAGAAATTTGATTAAAGTAGTTAGAGACCAGATAAAAATGGTAGAGAGTAGTTTTGTCTTAGAAAAGCCAGTTTTTATCTTAACAGATGAAATTGGTAATATTTTGTGGCGAGCTGGTAATATACAAGCTAAAGAACATGCAAATGAATTTTATTTTAGAGAAGGAACGATGTGGACGGAACTTAATGTTGGAACGAATGCCATTGGAATTGCTTTGAGAACTAAA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAACATTTTCCTATCAGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [83.3-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //