Array 1 39024-41683 **** Predicted by CRISPRDetect 2.4 *** >NZ_WCKP01000020.1 Bacteroides salyersiae strain BIOML-A29 scaffold20_size98744, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ============================================= ================== 39024 35 100.0 34 ................................... ATTGTTGATCATTTGAGTGAGGAATTGTCTGCAT 39093 35 100.0 40 ................................... GCTTTAATTGGTGCATTTGTCGGCGTTTGCTGCAATGTAT 39168 35 100.0 38 ................................... GCAATAGTAAGTGTTTTTGTCTTCTGTGCTCTCTTTCT 39241 35 100.0 34 ................................... AAGTATATCTTTGCCCGGGCTCGTGAAAGCTTTG 39310 35 100.0 39 ................................... AAAACTTTATACAAAGTGGGAAAGTGTAGGATGTATAGA 39384 35 100.0 35 ................................... ACAAAACGTTCAAAATTCTAAATAACGACCACCAT 39454 35 100.0 45 ................................... CTAAAGCAGAAATGCTGATAAAGGGAAATACCCAGCTGTCAAAGA 39534 35 100.0 34 ................................... CTTATCATCGTTGGCGTTTGCTCTATGCAGGCCC 39603 35 100.0 36 ................................... AGTGTTACTGCCTTTCAGCCGGTATGCCTATTGGTA 39674 35 100.0 36 ................................... AAATATGGCGCTGTCATCGGCTTGGAGAAACGCTTC 39745 35 100.0 36 ................................... ATAACTGGAGCACCAGAAGAAGGCATTGACCAAACA 39816 35 100.0 36 ................................... CTTCTATGGCGACCCCAAGTACAACGGTACCAAGGT 39887 35 100.0 37 ................................... AATACCTCGCGAAGGTAGCTCTGTTCATCCATGAGGA 39959 35 100.0 34 ................................... TATGAGCATTTTGCCACGCCGCAAAGGTATAAAA 40028 35 100.0 33 ................................... ACTGTTCTCATGATTATAGCGATGCCTTTGCAT 40096 35 100.0 33 ................................... CATCAAAGAAAACATATTGCATCTATCAAAGGA 40164 35 100.0 37 ................................... CTCAAGAGTATAAAGCTCGTGAGGTTCACTCCAGCGA 40236 35 100.0 32 ................................... GAAAGACAATGCCAAACTTGCTATATTTGCAA 40303 35 100.0 34 ................................... ATTGTGGTTACATTCCTGCGATGATGAATTTGGG 40372 35 100.0 36 ................................... CCAGCCGTAGCGCCTTTATTTGAAATTGCCGAACCC 40443 35 100.0 35 ................................... GTTTGTACCTTGGTGCCGAAGGCGGTTACGCATTC 40513 35 100.0 36 ................................... TTTTCTCCTGGGCATGGGAAACAGCCGGCAAATACT 40584 35 100.0 37 ................................... GGTTTCTGGGGTGGCTATGCCAACCAGGATGAAGTCT 40656 35 100.0 33 ................................... TCATGAAGAGGCATTTGAAATTCCTTTTGTAGG 40724 35 100.0 38 ................................... TTTTTCAGCGGAAATAACCGAAGCATTAGCAGCCGGAA 40797 35 100.0 36 ................................... AGTAAAGTGGGAAGAAGTTGTAAAAGCTCGTATGGG 40868 35 100.0 38 ................................... TTGAGGGTTGCTGCTGGTCCTCTATCGAGTATAATAGT 40941 35 100.0 37 ................................... AAAAGTATGAAGACAATGAGAAATTTCGCAGCTGCGA 41013 35 100.0 35 ................................... ACAGTAGCCATCAACATAGATCACTTAGTAAGTGT 41083 35 100.0 33 ................................... GATTATAGGCTCTGTCAATGAGGATCCATCACT 41151 35 100.0 35 ................................... AACAGCGTTCGAAATATTGCGCCTTTCCACACTGT 41221 35 100.0 37 ................................... AAATCTCTTGAAAGAATACATTGACATATGTCTAAGA 41293 35 100.0 35 ................................... TAGACAGTGTATAACAAAATCAATATATCATGAAA 41363 35 100.0 35 ................................... ATACATTCGAAAACTTTATATAAAATGGGAGAGTG 41433 35 100.0 37 ................................... TATATTTATAACCGCTGCAGAAGCATTTGCCAAACGA 41505 35 100.0 36 ................................... TCACCTATTATGATGTTTGCTTTCGTGGCTTAAATT 41576 35 100.0 38 ................................... TTATTTATTATTTGTATGGTAATTTCTGCTTTTGCCAA 41649 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ============================================= ================== 38 35 100.0 36 GTCTTAATCCTTATTCTACTGGAAGTAACTCAAAT # Left flank : GTGCCGGTTGATATATGATTTTTGTATAACAATTGACGCAAATCGGATAGTATATGACTGTATCGGAGCGTTTATCCAATATTTTTTTTATTTTCTCTTGCACTTGTAATAGTTGGATATCGGTAAACATACATTCGAATACACTGAAATTGACTCTTATTCCATATTTTTCCAGAATTTTAGAGACGCGTGCTCTTTTCCGGTCTTCTTTAATATCGTATGCTACGACACAGAATGTCTTTTTTGCTCTTGCCATTTGGTGTTGCGTATTTGGAGGTAAATATAATGAAAATGCGGGATATGTGGTATTGGAAAAGAAAAATTTTGAGGTTAAAATGGGGTAATATTATTAGAGTGAATTAAAGGTGTATGGATGTATCATTGTTTCTGAATTCGGGATAATGAGATATAAATGATTTTAGAGAGTTGCTTGTCTTAATATTCTACTGGAAGTAACTCAAATACGGGATCTGGGTTGTGACATGGCGTAACGGAGAAAA # Right flank : TACTCTGATTATCAATAATTTATTTTTTACTCTTTGTTTTGTATATTTCTCATAAAGTATTGTTATTTAATACAATACGCTATATTCCAATAACTTTTTCGCAAATGTATGTATTATTTTTAAGAAAATCAATAATTTGTTTGGCTAATATAGGCTTATCTGCTTAAAAATAAGATATTTACATTGAATATCTATTTTCGCAAATGATTTTGATTTTCTTTAAAAAAAATCATTTTCGAAAAACAGCATAGAGGTATTATACAATATATTATTGATTATAAATGCAATACGTCAAAGATCACTTGTATAGTAATGATTCATTTTCGCAAATGATTTACTTTGTTGCTAACATGTATTTTGTTGCGAATGTGATTTAAGTAATACAATTTATCTAAAAAATATAATATCAAATAAATCAGATAATTATCTTTTTATCGTTTTTCGCAAGAGTTTGGCCTTTTTTCATGTTTTGTTCACTTCATCTCACCACTTGGCTACAT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTAATCCTTATTCTACTGGAAGTAACTCAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [56.7-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA // Array 1 117136-115665 **** Predicted by CRISPRDetect 2.4 *** >NZ_WCKP01000010.1 Bacteroides salyersiae strain BIOML-A29 scaffold10_size276461, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 117135 30 100.0 35 .............................. ATTGGGAGAAAGATTTTTTAACCACTGCCGTTCAG 117070 30 100.0 35 .............................. TGTTTAATATTTATATGTTATGAAAGAAAAAAAAA 117005 30 100.0 35 .............................. AAGCTAATCAAGCCGTGGGATCGCAACACGGGAGA 116940 30 100.0 35 .............................. AGTGGAGGATCACCACAAGCGATAAAATCACAAAT 116875 30 100.0 37 .............................. ACAAAATCGCGGTAATCCTTCCACAAGGCACGCAAAG 116808 30 100.0 37 .............................. GAGTAGACACACAACTCGCACAATCATTGATCGACCT 116741 30 100.0 34 .............................. TGGAAGTCAATCAAAAAGCGATCAGCGCAAAAAG 116677 30 100.0 34 .............................. AATATGAACGCAGGCTTCAAAAACAAAGAAGGGG 116613 30 100.0 35 .............................. TGGCTGCTTGTGCAATGTCCCATCTGTCTGTTCGG 116548 30 100.0 37 .............................. AACTCCACTTAAAGAGAGGAATTCATAAACAACTAAT 116481 30 100.0 34 .............................. ATCGTTGGATGTGTTAGTACGTTTGGTTGTAAGT 116417 30 100.0 34 .............................. AACCTTCTATTTCGTACTGTCTTGACAAGATCAT 116353 30 100.0 38 .............................. TGTTATATTTGCAAAGTAATCAAATCTATTATTCACTT 116285 30 100.0 35 .............................. TTAACAGAGTACTACGAATTCAATGGATACACTCC 116220 30 100.0 36 .............................. GTGGTAATCTTGCAGGTGCTTCCCCCCAATTGAATG 116154 30 100.0 36 .............................. ACTTTTGAAGTCAAGGTATTGCGGTTTGTGTACGAT 116088 30 100.0 34 .............................. GATTGGCGCGGTCGCTTTCGATGATTTGGCCATG 116024 30 100.0 38 .............................. TGTCAGAAGCATCAACCGTTCCATCACCTGTAATCTTG 115956 30 100.0 37 .............................. CTGTTTCTTACGCTTACCTATAATAATGAACATCTCC 115889 30 100.0 34 .............................. TGAAGATGATCCTGTGCGGTACGATTGTCTCCGG 115825 30 100.0 36 .............................. AATTGACCTAAGGTTATAAATATACCTAGTAATGTA 115759 30 96.7 35 .................A............ TAATAATTGGCAGCAGTACCCATTGCACAGGCATC 115694 30 86.7 0 ............T....A..A.......T. | ========== ====== ====== ====== ============================== ====================================== ================== 23 30 99.3 36 GTATTAATTGTACCGTTGTGGAATTGAAAC # Left flank : CCTTTAAAATGTATTGGTAAAATATGTATGTCATTTTGGTTTATGATTTTGGCGAAAGACGAGTTGCAAAGATGCTGAAGCTATGTCGTAAGTATTTGAATTGGATACAAAATTCCGTATTTGAGGGGGAAATATCAGAAGTACGATTAAAGGAAATGTTATCTGCTGCAAAGGCTTTCATGAAGGAAGATGAAGATAGTATTATTGTTTTTAAAGGTTCCTCACAATGTTCTTTGGAGAAGAAAATTATCGGGAAAGAACGGTGTAGTATCGACAATTTTTTATAATTTAGTTGTCGATAATTGTTTTTATTGTCTTTGCAATAAGGCTCTACGTTGTAGATCGTTCTTTGACGTGTTGATATACAGTGAAATAGCTGCTATGTCGATGTCCGGCATTTTTTATGTTATTATCCATCGACATAATTAATCATATAAAAAGCATATTTGTTATTTGCTAACTCACTCATTTTTAATTGTTTTTTTTGAGTGTTTGTTAGA # Right flank : ATGTGAACCGTAATTTTGTTGGAACAGAGTGTTGTATGTTAATAGCACTACCATGAAATGAGATTTTATAGATTACTAAATGAAAGGGTGATCTACGTCACATTGTGAGCGCTTTAAATACCGGTTCTGCCTTTTGTATTTCTGATTCAAATCCAAACCAGTATCCTGCTTGTCCTTCTTGATTGGCGGGCAGGAAACATAAGCGTAATGTCTCTTTGTACTTGCCATAAATGGTTATCCACGTTTCGGGAGGGATTTGTCGTTTCGTTTTTACTTTTTCTGCCGGAAGTTTCTTTAGTGACATGCCCGCTTCTATCCAAGCAATGCTGACCTGTGTCTGATAGGCCGGATAATTTTGCTTACAGAATTCATACAAAATCAATCCTCTTTTTTCCAAGCTCAGTGGTTGGTCTATCAAGCCGATTTGCATAAGGTGATCCAGAAAATGATGCAAGAAATGTTCGTTTTCCAACATCAGTGTCCGAGTGATGTTTTGCCAG # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTAATTGTACCGTTGTGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : NA // Array 2 131078-130852 **** Predicted by CRISPRDetect 2.4 *** >NZ_WCKP01000010.1 Bacteroides salyersiae strain BIOML-A29 scaffold10_size276461, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 131077 30 100.0 35 .............................. TACAGCAGCGCTGGGTTTAGTCCTGCTGCTTCAAG 131012 30 100.0 35 .............................. AGGAAAAATTCACAAGACACAGAGCCTACAAACTC 130947 30 100.0 36 .............................. GTTGATCCGCTATTGTTTTTAGATATAGTCATACTC 130881 30 73.3 0 .T...............A......AATTTG | ========== ====== ====== ====== ============================== ==================================== ================== 4 30 93.3 36 GGCTTAATTGTACCGTTGTGGAATTGAAAC # Left flank : GTGAAGCAGAAGTAAAAGAAGGGAAACGTCATGGACGTTATCGCGAATATTATGAAAATGGAAAACTGAAACTTCGCGGGAAATATGCCAATAACTTACCTAAAGGTACATGGAAGTATTATACGGACGAGGGAGAGTTTGAACGCAAAGAGAAATATTAATTGTTATATTGGGTTTTGATATAGTTTTATTAAATAGAAAGCCTCTGATTGATCAGATGAAAATGTATGCTTATGTATTACTTATTTTTTTCTTAAGAAATAAAATTATGTCAGAATTTTATTTGTAATTTAGTTGTCGATAATCGTTTGTATAGTCTGATTAATCTGGATTGATATATAAATTTTTCTTTGAAATGTTGATATACAGTGAAATAGCTATTGTGTCGATGTTCCATGCTTTTTATACGATTAGCCATCGACATAATTGATGTTATAAAATGGTGTTTTTATTGGATAACTTGCTTATTATTAGATATCTTTTTTGAATATTTAATGTGG # Right flank : AGATTATCCTTATGTGTAATCTTTTGCTATCTATGTTACTACTTTTTTATTTGTTAAAAAATACAAGAAGAAAACGCGCAATTATATTCTTTTATATCATTTAACATCAGATAATTAACCTAATTTCTATTTTTGAGACCCCAATTCGACAATTCATATTTAATTATTAACCTATATATTTTATATGACTATGCGAACTAATTATTTATTATTTTTAGTAATCATGTTGGGAATATTTCCCTTGAGTCACACACAAGCATCCGATTCTATTTCAAACAATGTAGTACTTTATTCTCCTTACACGAAAATCTCAGTATCGCCCGGAGAAAGTATTAACTACAGTATCGATTTAATAAATAATGGTAGTGAGATTTATAATGAGAATATCTCATTGAGTGGATTGCCGTCCAGTTGGAAATACGATATAAAATCCGGTAGTTGGAATATCAAACAATTAGCTGTACTGCCCAATGAAAAAAAGAATTTCAGTTTAACGGTGA # Questionable array : NO Score: 8.52 # Score Detail : 1:0, 2:3, 3:3, 4:0.66, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTTAATTGTACCGTTGTGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA // Array 1 69490-69141 **** Predicted by CRISPRDetect 2.4 *** >NZ_WCKP01000009.1 Bacteroides salyersiae strain BIOML-A29 scaffold9_size210619, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================================== =================================== ================== 69489 42 100.0 34 .......................................... CAACCATTGACGGTGTGGATGGTTTACCTGAGGA 69413 42 100.0 35 .......................................... CAACGATATATAAGCATTTTGGCGTTAAACTTCCA 69336 42 95.2 35 .............................A..G......... TAGCAAAATCACATCATCAATTTCTTCTTCCAAAG 69259 42 81.0 35 T....CT.G..A...A....A...........G......... CAACAAATACTTTTTCGATATTATGATCGGCAAAG 69182 42 83.3 0 ......TCG....C................A....T....T. | ========== ====== ====== ====== ========================================== =================================== ================== 5 42 91.9 35 CTGTTTCTAATGTTGCAAATGTACTAATTTGAAAGCGAATCA # Left flank : ACTGGCCCAGCAGAATACATCCTTTTCTCCTTGTATGTTGGGACCCGCACCTTTGGTATAATCCCAAACTTCAAGTACCAGATCAAAGAAAGGTTGTGGGGGCGTGTCCTGTGCCTTACAGAAAGAAGAGATAAGTAACGCTGTCATTAGTAGTAAATAATTTTTCTTCATACCATGTGTTTTTTAAGTTTATGATCTTTAATTTTTTTTGGAGCAATACAGATCGGGACTTCGTCTTTAAAGAGATGCTTTCTCTATATTACTTTATTATAAAGCGGATGAGAAGAAAAAAACCACTAATCTTTTTCCAATAATAATTTAGTTTGGGATTTAATTTAGCAAAAAAAGTACAAGATATTGATGCTCTTGGTAGTAATTAGAACTCTTTTTAAATTAAAAATCCCATTAACTAATGGGATTTTCTTGAAGAAACAGCATTTATTTTTATTTTCTAAATTTTATTGTAATCTTTTGAATTACAGTTTGTTGTTGGCATTGTA # Right flank : CAACTAAAAAATGGTGGTTATTAAAATAATATTTGTAATTTTGTAGTCCTAACCCTGTGGGGGAGTGAGACTTTAGCGGGTTATGTGATATTTGTATCGTTTAGCCGCTAATTTGTTTTCATACTTTTCCTAAAGCAAACTGCTGTCGTTGCTGAGGATAATCACGATTGTGTAGAGAGAGAATTCTAACTTAGTGCAAATGGAATTTGATATGAACTCAATGAAACATATTTGATTGATATATTGGTAAATAACCATTGTTAAAAAAAAGTGTTCATTAATGAATTGGGGCGTAAATTATAACATTTTACATCTTACTTATCTATCTTCCTTTTTTAACATTGTTAATTGCATTTCTCATATATACTTTCCTGCTTAACAAGAAGCGTATTTCTTGTATATAAAGAACGTATCCTTTGTCGACAAGAAATACGATTTAACGCAGCGTTAACATGGCTTTCTTTCGTGTATAAACAACGGCTCTTTGATCTCAGGAAATT # Questionable array : NO Score: 2.58 # Score Detail : 1:0, 2:0, 3:0, 4:0.60, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTTCTAATGTTGCAAATGTACTAATTTGAAAGCGAATCA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.30,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [15-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //